Gustavo D. Parisi

According to our database, Gustavo D. Parisi authored at least 25 papers between 2007 and 2023.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2023

CardIAP: calcium transients confocal image analysis tool.

Ana Julia Velez Rueda, Luis Alberto Gonano, Agustín García Smith, Gustavo D. Parisi, María Silvina Fornasari, Leandro Matías Sommese

Frontiers Bioinform., May, 2023

CaviDB: a database of cavities and their features in the structural and conformational space of proteins.

Ana Julia Velez Rueda, Franco Leonardo Bulgarelli, Nicolas Palopoli, Gustavo D. Parisi

Database J. Biol. Databases Curation, 2023

2022

CoDNaS-Q: a database of conformational diversity of the native state of proteins with quaternary structure.

Nahuel Escobedo, Ronaldo Romario Tunque Cahui, Gastón Caruso, Emilio Garcia-Rios, Layla Hirsh, Alexander Miguel Monzon, Gustavo D. Parisi, Nicolas Palopoli

Bioinform., October, 2022

DisProt in 2022: improved quality and accessibility of protein intrinsic disorder annotation.

Federica Quaglia, Bálint Mészáros, Edoardo Salladini, András Hatos, Rita Pancsa, Lucía B. Chemes, Mátyás Pajkos, Tamas Lazar, Samuel Peña-Díaz, Jaime Santos, Veronika Ács, Nazanin Farahi, Erzsébet Fichó, Maria Cristina Aspromonte, Claudio Bassot, Anastasia Chasapi, Norman E. Davey, Radoslav Davidovic, Laszlo Dobson, Arne Elofsson, Gábor Erdös, Pascale Gaudet, Michelle G. Giglio, Juliana Glavina, Javier Iserte, Valentín Iglesias, Zsófia L. Kálmán, Matteo Lambrughi, Emanuela Leonardi, Sonia Longhi, Sandra Macedo-Ribeiro, Emiliano Maiani, Julia Marchetti, Cristina Marino Buslje, Attila Meszaros, Alexander Miguel Monzon, Giovanni Minervini, Suvarna Nadendla, Juliet F. Nilsson, Marián Novotný, Christos A. Ouzounis, Nicolas Palopoli, Elena Papaleo, Pedro J. Barbosa Pereira, Gabriele Pozzati, Vasilis J. Promponas, Jordi Pujols, Alma Carolina Sanchez Rocha, Martin Salas, Luciana Rodriguez Sawicki, Éva Schád, Aditi Shenoy, Tamás Szaniszló, Konstantinos D. Tsirigos, Nevena Veljkovic, Gustavo D. Parisi, Salvador Ventura, Zsuzsanna Dosztányi, Peter Tompa, Silvio C. E. Tosatto, Damiano Piovesan

Nucleic Acids Res., 2022

Impact of protein conformational diversity on AlphaFold predictions.

Tadeo E. Saldaño, Nahuel Escobedo, Julia Marchetti, Diego Javier Zea, Juan Mac Donagh, Ana Julia Velez Rueda, Eduardo Gonik, Agustina García Melani, Julieta Novomisky Nechcoff, Martín N. Salas, Tomás Peters, Nicolás Demitroff, Sebastian Fernandez Alberti, Nicolas Palopoli, María Silvina Fornasari, Gustavo D. Parisi

Bioinform., 2022

CoDNaS-RNA: a database of conformational diversity in the native state of RNA.

Martin Gonzalez Buitron, Ronaldo Romario Tunque Cahui, Emilio Garcia-Rios, Layla Hirsh, Gustavo D. Parisi, María Silvina Fornasari, Nicolas Palopoli

Bioinform., 2022

2021

MobiDB: intrinsically disordered proteins in 2021.

Damiano Piovesan, Marco Necci, Nahuel Escobedo, Alexander Miguel Monzon, András Hatos, Ivan Micetic, Federica Quaglia, Lisanna Paladin, Pathmanaban Ramasamy, Zsuzsanna Dosztányi, Wim F. Vranken, Norman E. Davey, Gustavo D. Parisi, Mónika Fuxreiter, Silvio C. E. Tosatto

Nucleic Acids Res., 2021

RepeatsDB in 2021: improved data and extended classification for protein tandem repeat structures.

Lisanna Paladin, Martina Bevilacqua, Sara Errigo, Damiano Piovesan, Ivan Micetic, Marco Necci, Alexander Miguel Monzon, Maria Laura Fabre, José Luis López, Juliet F. Nilsson, Javier Ríos, Pablo Lorenzano Menna, Maia Cabrera, Martin Gonzalez Buitron, Mariane Gonçalves Kulik, Sebastian Fernandez Alberti, María Silvina Fornasari, Gustavo D. Parisi, Antonio Lagares, Layla Hirsh, Miguel A. Andrade-Navarro, Andrey V. Kajava, Silvio C. E. Tosatto

Nucleic Acids Res., 2021

2020

DisProt: intrinsic protein disorder annotation in 2020.

András Hatos, Borbála Hajdu-Soltész, Alexander Miguel Monzon, Nicolas Palopoli, Lucía Álvarez, Burcu Aykaç Fas, Claudio Bassot, Guillermo I. Benítez, Martina Bevilacqua, Anastasia Chasapi, Lucía B. Chemes, Norman E. Davey, Radoslav Davidovic, A. Keith Dunker, Arne Elofsson, Julien Gobeill, Nicolás S. González Foutel, Govindarajan Sudha, Mainak Guharoy, Tamás Horváth, Valentin Iglesias, Andrey V. Kajava, Orsolya P. Kovács, John Lamb, Matteo Lambrughi, Tamas Lazar, Jeremy Y. Leclercq, Emanuela Leonardi, Sandra Macedo-Ribeiro, Mauricio Macossay-Castillo, Emiliano Maiani, José A. Manso, Cristina Marino Buslje, Elizabeth Martínez-Pérez, Bálint Mészáros, Ivan Micetic, Giovanni Minervini, Nikoletta Murvai, Marco Necci, Christos A. Ouzounis, Mátyás Pajkos, Lisanna Paladin, Rita Pancsa, Elena Papaleo, Gustavo D. Parisi, Emilie Pasche, Pedro J. Barbosa Pereira, Vasilis J. Promponas, Jordi Pujols, Federica Quaglia, Patrick Ruch, Marco Salvatore, Éva Schád, Beáta Szabó, Tamás Szaniszló, Stella Tamana, Ágnes Tantos, Nevena Veljkovic, Salvador Ventura, Wim F. Vranken, Zsuzsanna Dosztányi, Peter Tompa, Silvio C. E. Tosatto, Damiano Piovesan

Nucleic Acids Res., 2020

Exploring Conformational Space with Thermal Fluctuations Obtained by Normal-Mode Analysis.

Tadeo E. Saldaño, Victor M. Freixas, Silvio C. E. Tosatto, Gustavo D. Parisi, Sebastian Fernandez Alberti

J. Chem. Inf. Model., 2020

The articles.ELM resource: simplifying access to protein linear motif literature by annotation, text-mining and classification.

Nicolas Palopoli, Javier Iserte, Lucía B. Chemes, Cristina Marino Buslje, Gustavo D. Parisi, Toby J. Gibson, Norman E. Davey

Database J. Biol. Databases Curation, 2020

Revenant: a database of resurrected proteins.

Matias Sebastian Carletti, Alexander Miguel Monzon, Emilio Garcia-Rios, Guillermo I. Benítez, Layla Hirsh, María Silvina Fornasari, Gustavo D. Parisi

Database J. Biol. Databases Curation, 2020

2019

Bioinformatics calls the school: Use of smartphones to introduce Python for bioinformatics in high schools.

Ana Julia Velez Rueda, Guillermo I. Benítez, Julia Marchetti, Marcia Anahi Hasenahuer, María Silvina Fornasari, Nicolas Palopoli, Gustavo D. Parisi

PLoS Comput. Biol., 2019

ProtMiscuity: a database of promiscuous proteins.

Ana Julia Velez Rueda, Nicolas Palopoli, Matías Zacarías, Leandro Matías Sommese, Gustavo D. Parisi

Database J. Biol. Databases Curation, 2019

On the dynamical incompleteness of the Protein Data Bank.

Cristina Marino Buslje, Alexander Miguel Monzon, Diego Javier Zea, María Silvina Fornasari, Gustavo D. Parisi

Briefings Bioinform., 2019

2018

MobiDB 3.0: more annotations for intrinsic disorder, conformational diversity and interactions in proteins.

Damiano Piovesan, Francesco Tabaro, Lisanna Paladin, Marco Necci, Ivan Micetic, Carlo Camilloni, Norman E. Davey, Zsuzsanna Dosztányi, Bálint Mészáros, Alexander Miguel Monzon, Gustavo D. Parisi, Éva Schád, Pietro Sormanni, Peter Tompa, Michele Vendruscolo, Wim F. Vranken, Silvio C. E. Tosatto

Nucleic Acids Res., 2018

Dynamics fingerprints of active conformers of epidermal growth factor receptor kinase.

German P. Barletta, Marcia Anahi Hasenahuer, María Silvina Fornasari, Gustavo D. Parisi, Sebastian Fernandez Alberti

J. Comput. Chem., 2018

Large scale analysis of protein conformational transitions from aqueous to non-aqueous media.

Ana Julia Velez Rueda, Alexander Miguel Monzon, Sebastián M. Ardanaz, Luis E. Iglesias, Gustavo D. Parisi

BMC Bioinform., 2018

2017

Conformational diversity analysis reveals three functional mechanisms in proteins.

Alexander Miguel Monzon, Diego J. Zea, María Silvina Fornasari, Tadeo E. Saldaño, Sebastian Fernandez Alberti, Silvio C. E. Tosatto, Gustavo D. Parisi

PLoS Comput. Biol., 2017

2016

Evolutionary Conserved Positions Define Protein Conformational Diversity.

Tadeo E. Saldaño, Alexander Miguel Monzon, Gustavo D. Parisi, Sebastian Fernandez Alberti

PLoS Comput. Biol., 2016

CoDNaS 2.0: a comprehensive database of protein conformational diversity in the native state.

Alexander Miguel Monzon, Cristian Oscar Rohr, María Silvina Fornasari, Gustavo D. Parisi

Database J. Biol. Databases Curation, 2016

2013

BeEP Server: using evolutionary information for quality assessment of protein structure models.

Nicolas Palopoli, Esteban Lanzarotti, Gustavo D. Parisi

Nucleic Acids Res., 2013

CoDNaS: a database of conformational diversity in the native state of proteins.

Alexander Miguel Monzon, Ezequiel I. Juritz, María Silvina Fornasari, Gustavo D. Parisi

Bioinform., 2013

2011

PCDB: a database of protein conformational diversity.

Ezequiel I. Juritz, Sebastian Fernandez Alberti, Gustavo D. Parisi

Nucleic Acids Res., 2011

2007

Computational Biology in Argentina.

Sebastian Bassi, Virginia González, Gustavo D. Parisi

PLoS Comput. Biol., 2007