Gur Yaari

According to our database, Gur Yaari authored at least 17 papers between 2009 and 2024.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2024

nf-core/airrflow: An adaptive immune receptor repertoire analysis workflow employing the Immcantation framework.

Gisela Gabernet, Susanna Marquez, Robert Bjornson, Alexander Peltzer, Hailong Meng, Edel Aron, Noah Y. Lee, Cole G. Jensen, David Ladd, Mark Polster, Friederike Hanssen, Simon Heumos, Gur Yaari, Markus C. Kowarik, Sven Nahnsen, Steven H. Kleinstein

PLoS Comput. Biol., 2024

An unbiased comparison of immunoglobulin sequence aligners.

Thomas Konstantinovsky, Ayelet Peres, Pazit Polak, Gur Yaari

Briefings Bioinform., 2024

2021

Breast cancer is marked by specific, Public T-cell receptor CDR3 regions shared by mice and humans.

Miri Gordin, Hagit Philip, Alona Zilberberg, Moriah Gidoni, Raanan Margalit, Christopher Clouser, Kristofor Adams, Francois Vigneault, Irun R. Cohen, Gur Yaari, Sol Efroni

PLoS Comput. Biol., 2021

The immuneML ecosystem for machine learning analysis of adaptive immune receptor repertoires.

Milena Pavlovic, Lonneke Scheffer, Keshav Motwani, Chakravarthi Kanduri, Radmila Kompova, Nikolay Vazov, Knut Waagan, Fabian L. M. Bernal, Alexandre Almeida Costa, Brian Corrie, Rahmad Akbar, Ghadi S. Al Hajj, Gabriel Balaban, Todd M. Brusko, Maria Chernigovskaya, Scott Christley, Lindsay G. Cowell, Robert Frank, Ivar Grytten, Sveinung Gundersen, Ingrid Hobæk Haff, Eivind Hovig, Ping-Han Hsieh, Günter Klambauer, Marieke L. Kuijjer, Christin Lund-Andersen, Antonio Martini, Thomas Minotto, Johan Pensar, Knut D. Rand, Enrico Riccardi, Philippe A. Robert, Artur Rocha, Andrei Slabodkin, Igor Snapkov, Ludvig Magne Sollid, Dmytro Titov, Cédric R. Weber, Michael Widrich, Gur Yaari, Victor Greiff, Geir Kjetil Sandve

Nat. Mach. Intell., 2021

Gambling Strategies and Prize-Pricing Recommendation in Sports Multi-Bets.

Oz Pirvandy, Moti Fridman, Gur Yaari

Big Data Cogn. Comput., 2021

2020

Axonal Tree Morphology and Signal Propagation Dynamics Improve Interneuron Classification.

Netanel Ofer, Orit Shefi, Gur Yaari

Neuroinformatics, 2020

VDJbase: an adaptive immune receptor genotype and haplotype database.

Aviv Omer, Or Shemesh, Ayelet Peres, Pazit Polak, Adrian J. Shepherd, Corey T. Watson, Scott D. Boyd, Andrew M. Collins, William D. Lees, Gur Yaari

Nucleic Acids Res., 2020

OGRDB: a reference database of inferred immune receptor genes.

William D. Lees, Christian E. Busse, Martin Corcoran, Mats Ohlin, Cathrine Scheepers, Frederick A. Matsen IV, Gur Yaari, Corey T. Watson, Andrew M. Collins, Adrian J. Shepherd

Nucleic Acids Res., 2020

2019

Immunoglobulin Clonotype and Ontogeny Inference.

Pazit Polak, Ramit Mehr, Gur Yaari

Proceedings of the Encyclopedia of Bioinformatics and Computational Biology - Volume 2, 2019

Gene set meta-analysis with Quantitative Set Analysis for Gene Expression (QuSAGE).

Hailong Meng, Gur Yaari, Christopher R. Bolen, Stefan Avey, Steven H. Kleinstein

PLoS Comput. Biol., 2019

RAbHIT: R Antibody Haplotype Inference Tool.

Ayelet Peres, Moriah Gidoni, Pazit Polak, Gur Yaari

Bioinform., 2019

2015

Change-O: a toolkit for analyzing large-scale B cell immunoglobulin repertoire sequencing data.

Namita T. Gupta, Jason A. Vander Heiden, Mohamed Uduman, Daniel Gadala-Maria, Gur Yaari, Steven H. Kleinstein

Bioinform., 2015

2014

pRESTO: a toolkit for processing high-throughput sequencing raw reads of lymphocyte receptor repertoires.

Jason A. Vander Heiden, Gur Yaari, Mohamed Uduman, Joel N. H. Stern, Kevin C. O'Connor, David A. Hafler, Francois Vigneault, Steven H. Kleinstein

Bioinform., 2014

2011

Detecting selection in immunoglobulin sequences.

Mohamed Uduman, Gur Yaari, Uri Hershberg, Jacob A. Stern, Mark J. Shlomchik, Steven H. Kleinstein

Nucleic Acids Res., 2011

2010

Optimizing Metapopulation Sustainability through a Checkerboard Strategy.

Yossi Ben Zion, Gur Yaari, Nadav M. Shnerb

PLoS Comput. Biol., 2010

2009

Intermittency and Localization.

Gur Yaari, Dietrich Stauffer, Sorin Solomon

Proceedings of the Encyclopedia of Complexity and Systems Science, 2009

Do all economies grow equally fast?

Yaniv Dover, Sonia Moulet, Sorin Solomon, Gur Yaari

Risk Decis. Anal., 2009