Gultekin Özsoyoglu

Soc. Netw. Anal. Min., 2017

2016

Movie review analysis: Emotion analysis of IMDb movie reviews.

[BibT_eX]

[DOI]

Kamil Topal

Proceedings of the 2016 IEEE/ACM International Conference on Advances in Social Networks Analysis and Mining, 2016

Emotion -and area-driven topic shift analysis in social media discussions.

[BibT_eX]

[DOI]

Kamil Topal

Mehmet Koyutürk

Proceedings of the 2016 IEEE/ACM International Conference on Advances in Social Networks Analysis and Mining, 2016

2015

A distributional approach to summarization of radiology reports.

[BibT_eX]

[DOI]

Eamon Johnson

W. Christopher Baughman

Proceedings of the 2015 IEEE International Conference on Bioinformatics and Biomedicine, 2015

A method for imputation of semantic class in diagnostic radiology text.

[BibT_eX]

[DOI]

Eamon Johnson

W. Christopher Baughman

Proceedings of the 2015 IEEE International Conference on Bioinformatics and Biomedicine, 2015

2014

MIRA: mutual information-based reporter algorithm for metabolic networks.

[BibT_eX]

[DOI]

A. Ercüment Çiçek

Kathryn Roeder

Bioinform., 2014

An online system for metabolic network analysis.

[BibT_eX]

[DOI]

Abdullah Ercument Cicek

Zehra Meral Özsoyoglu

Database J. Biol. Databases Curation, 2014

2013

ADEMA: An Algorithm to Determine Expected Metabolite Level Alterations Using Mutual Information.

[BibT_eX]

[DOI]

PLoS Comput. Biol., 2013

iPathCase<sup>KEGG</sup>: An iPad interface for KEGG metabolic pathways.

[BibT_eX]

[DOI]

Health Inf. Sci. Syst., 2013

An online model composition tool for system biology models.

[BibT_eX]

[DOI]

BMC Syst. Biol., 2013

Locating basic bio-entities in genome-scale reconstructed metabolic networks.

[BibT_eX]

[DOI]

Xinjian Qi

Proceedings of the 2013 IEEE International Conference on Bioinformatics and Biomedicine, 2013

Modeling Incidental Findings in Radiology Records.

[BibT_eX]

[DOI]

Eamon Johnson

W. Christopher Baughman

Proceedings of the ACM Conference on Bioinformatics, 2013

PathCase-MAW: An Online Metabolic Network Analysis Workbench.

[BibT_eX]

[DOI]

Proceedings of the ACM Conference on Bioinformatics, 2013

2012

Observation Conflict Resolution in steady-State metabolic Network Dynamics Analysis.

[BibT_eX]

[DOI]

A. Ercüment Çiçek

J. Bioinform. Comput. Biol., 2012

A New metabolomics Analysis Technique: steady-State metabolic Network Dynamics Analysis.

[BibT_eX]

[DOI]

J. Bioinform. Comput. Biol., 2012

PathCase-SB: integrating data sources and providing tools for systems biology research.

[BibT_eX]

[DOI]

BMC Syst. Biol., 2012

2011

PathCase-SB architecture and database design.

[BibT_eX]

[DOI]

BMC Syst. Biol., 2011

Resolving observation conflicts in steady state metabolic network dynamics analysis.

[BibT_eX]

[DOI]

A. Ercüment Çiçek

Proceedings of the ACM International Conference on Bioinformatics, 2011

Computational interpretation of metabolomics measurements: steady-state metabolic network dynamics analysis.

[BibT_eX]

[DOI]

Proceedings of the ACM International Conference on Bioinformatics, 2011

2010

Querying metabolism under Different Physiological Constraints.

[BibT_eX]

[DOI]

Richard W. Hanson

J. Bioinform. Comput. Biol., 2010

Advanced querying interface for biochemical network databases.

[BibT_eX]

[DOI]

Proceedings of the 2010 ACM Symposium on Applied Computing (SAC), 2010

2009

Context-based literature digital collection search.

[BibT_eX]

[DOI]

VLDB J., 2009

Corrigendum for Elliott, B. <i>et al.</i>, 'PathCase pathways database system', Bioinformatics 2008, 24(21) 2526-2533.

[BibT_eX]

[DOI]

Bioinform., 2009

Efficient k-word proximity search.

[BibT_eX]

[DOI]

Chirag Gupta

Proceedings of the 24th International Symposium on Computer and Information Sciences, 2009

PopulusLog: People information database.

[BibT_eX]

[DOI]

Proceedings of the 24th International Symposium on Computer and Information Sciences, 2009

A web-based data source for metabolomics.

[BibT_eX]

[DOI]

Proceedings of the 24th International Symposium on Computer and Information Sciences, 2009

Progressive Evaluation of XML Queries for Online Aggregation and Progress Indicator.

[BibT_eX]

[DOI]

Proceedings of the Database and Expert Systems Applications, 20th International Conference, 2009

2008

Discovering gene annotations in biomedical text databases.

[BibT_eX]

[DOI]

BMC Bioinform., 2008

PathCase: pathways database system.

[BibT_eX]

[DOI]

Bioinform., 2008

Protein Function Prediction Based on Patterns in Biological Networks.

[BibT_eX]

[DOI]

Proceedings of the Research in Computational Molecular Biology, 2008

On content-driven search-keyword suggesters for literature digital libraries.

[BibT_eX]

[DOI]

Sulieman Bani-Ahmad

Proceedings of the ACM/IEEE Joint Conference on Digital Libraries, 2008

elGiza, a research-pyramid based search tool for vertical literature digital libraries.

[BibT_eX]

[DOI]

Sulieman Bani-Ahmad

Proceedings of the 24th International Conference on Data Engineering Workshops, 2008

Taxonomy-superimposed graph mining.

[BibT_eX]

[DOI]

Proceedings of the EDBT 2008, 2008

2007

Mining biological networks for unknown pathways.

[BibT_eX]

[DOI]

Bioinform., 2007

Gene Ontology-Based Annotation Analysis and Categorization of Metabolic Pathways.

[BibT_eX]

[DOI]

Proceedings of the 19th International Conference on Scientific and Statistical Database Management, 2007

Annotating Genes Using Textual Patterns.

[BibT_eX]

[DOI]

Proceedings of the Biocomputing 2007, 2007

Evaluating Different Ranking Functions for Context-Based Literature Search.

[BibT_eX]

[DOI]

Proceedings of the 23rd International Conference on Data Engineering Workshops, 2007

Finding Related Papers in Literature Digital Libraries.

[BibT_eX]

[DOI]

Proceedings of the Research and Advanced Technology for Digital Libraries, 2007

Improved Publication Scores for Online Digital Libraries Via Research Pyramids.

[BibT_eX]

[DOI]

Sulieman Bani-Ahmad

Proceedings of the Research and Advanced Technology for Digital Libraries, 2007

2006

On Data and Visualization Models for Signaling Pathways.

[BibT_eX]

[DOI]

Proceedings of the 18th International Conference on Scientific and Statistical Database Management, 2006

Task-Oriented Integrated Use of Biological Web Data Sources.

[BibT_eX]

[DOI]

Proceedings of the 18th International Conference on Scientific and Statistical Database Management, 2006

Annotating proteins by mining protein interaction networks.

[BibT_eX]

[DOI]

Jiong Yang

Proceedings of the Proceedings 14th International Conference on Intelligent Systems for Molecular Biology 2006, 2006

Anti-Tamper Databases: Processing Aggregate Queries over Encrypted Databases.

[BibT_eX]

[DOI]

Sun S. Chung

Proceedings of the 22nd International Conference on Data Engineering Workshops, 2006

2005

Letter from the Special Issue Editor.

[BibT_eX]

[DOI]

IEEE Data Eng. Bull., 2005

Evaluating Publication Similarity Measures.

[BibT_eX]

[DOI]

IEEE Data Eng. Bull., 2005

Scalability of Databases for Digital Libraries.

[BibT_eX]

[DOI]

John Chmura

Proceedings of the Digital Libraries: Implementing Strategies and Sharing Experiences, 2005

Evaluating Score and Publication Similarity Functions in Digital Libraries.

[BibT_eX]

[DOI]

Proceedings of the Digital Libraries: Implementing Strategies and Sharing Experiences, 2005

2004

Querying web metadata: Native score management and text support in databases.

[BibT_eX]

[DOI]

ACM Trans. Database Syst., 2004

On Automated Lesson Construction from Electronic Textbooks.

[BibT_eX]

[DOI]

IEEE Trans. Knowl. Data Eng., 2004

Metadata-based modeling of information resources on the Web.

[BibT_eX]

[DOI]

Selma Ayse Özel

Özgür Ulusoy

J. Assoc. Inf. Sci. Technol., 2004

Towards an Integrated Software System for Biological Pathways.

[BibT_eX]

[DOI]

IEEE Data Eng. Bull., 2004

2003

Pathways Database System.

[BibT_eX]

[DOI]

Joseph H. Nadeau

OMICS, 2003

Pathways Database System: An Integrated System for Biological Pathways.

[BibT_eX]

[DOI]

Larkshmi Krishnamurthy

Bioinform., 2003

Pathways Database System: An Integrated Set of Tools for Biological Pathways.

[BibT_eX]

[DOI]

Wanhong Xu

Larkshmi Krishnamurthy

Proceedings of the 2003 ACM Symposium on Applied Computing (SAC), 2003

Web Information Resource Discovery: Past, Present, and Future.

[BibT_eX]

[DOI]

Abdullah Al-Hamdani

Proceedings of the Computer and Information Sciences, 2003

XML Restructuring and Integration for Tabular Data.

[BibT_eX]

[DOI]

Wei Yu

Proceedings of the Database and Expert Systems Applications, 14th International Conference, 2003

Selecting Topics for Web Resource Discovery: Efficiency Issues in a Database Approach.

[BibT_eX]

[DOI]

Abdullah Al-Hamdani

Proceedings of the Database and Expert Systems Applications, 14th International Conference, 2003

Anti-Tamper Databases: Querying Encrypted Databases.

[BibT_eX]

[DOI]

David A. Singer

Sun S. Chung

Proceedings of the Data and Applications Security XVII: Status and Prospects, 2003

2002

A Graphical Query Language: VISUAL and Its Query Processing.

[BibT_eX]

[DOI]

Nevzat Hurkan Balkir

IEEE Trans. Knowl. Data Eng., 2002

Sideway Value Algebra for Object-Relational Databases.

[BibT_eX]

[DOI]

Abdullah Al-Hamdani

Selma Ayse Özel

Özgür Ulusoy

Proceedings of 28th International Conference on Very Large Data Bases, 2002

2001

Topic-Centric Querying of Web Information Resources.

[BibT_eX]

[DOI]

Proceedings of the Database and Expert Systems Applications, 12th International Conference, 2001

2000

Query Processing Techniques for Multimedia Presentations.

[BibT_eX]

[DOI]

Multim. Tools Appl., 2000

Electronic Books in Digital Libraries.

[BibT_eX]

[DOI]

Proceedings of IEEE Advances in Digital Libraries 2000 (ADL 2000), 2000

1999

Querying Multimedia Presentations Based on Content.

[BibT_eX]

[DOI]

IEEE Trans. Knowl. Data Eng., 1999

Reminiscences on Influential Papers.

[BibT_eX]

SIGMOD Rec., 1999

Constraint-Based Automation of Multimedia Presentation Assembly.

[BibT_eX]

[DOI]

Joel Kraft

Multim. Syst., 1999

A Graph Query Language and Its Query Processing.

[BibT_eX]

[DOI]

Lei Sheng

Proceedings of the 15th International Conference on Data Engineering, 1999

1998

Delivering Presentations from Multimedia Servers.

[BibT_eX]

[DOI]

Nevzat Hurkan Balkir

VLDB J., 1998

Query Processing Techniques for Multimedia Presentation Graphs.

[BibT_eX]

[DOI]

Taekyong Lee

Proceedings of the RIDE'98, 1998

Multimedia Presentation Servers: Buffer Management and Admission Control.

[BibT_eX]

Nevzat Hurkan Balkir

Proceedings of the International Workshop on Multi-Media Database Management Systems, 1998

Selecting Actions to Trigger in Active Database Applications.

[BibT_eX]

[DOI]

Huang-Cheng Kuo

Proceedings of the Database and Expert Systems Applications, 9th International Conference, 1998

1997

A Constraint-Driven Approach to Automate the Organization and Playout of Presentations in Multimedia Databases.

[BibT_eX]

[DOI]

Multim. Tools Appl., 1997

Scheduling Nested Transactions in Real-Time Database System.

[BibT_eX]

Proceedings of the Real-Time Database and Information Systems, 1997

Advances in agile manufacturing.

[BibT_eX]

[DOI]

Virgilio B. Velasco Jr.

Proceedings of the 1997 IEEE International Conference on Robotics and Automation, 1997

A database server architecture for agile manufacturing.

[BibT_eX]

[DOI]

Proceedings of the 1997 IEEE International Conference on Robotics and Automation, 1997

A flexible software architecture for agile manufacturing.

[BibT_eX]

[DOI]

Yoohwan Kim

Ju-Yeon Jo

Virgilio B. Velasco Jr.

Proceedings of the 1997 IEEE International Conference on Robotics and Automation, 1997

Real-Time Transactions with Execution Histories: Priority Assignment and Load Control.

[BibT_eX]

[DOI]

Proceedings of the Sixth International Conference on Information and Knowledge Management (CIKM'97), 1997

1996

A Scientific Multimedia Database System for Polymer Science Experiments.

[BibT_eX]

[DOI]

Proceedings of the Eighth International Conference on Scientific and Statistical Database Management, 1996

A Framework for Cooperative Real-Time Transactions.

[BibT_eX]

[DOI]

Huang-Cheng Kuo

Proceedings of the Online-Proceedings of the First International Workshop on Real-Time Databases: Issues and Applications, 1996

Automating the Organization of Presentations for Playout Management in Multimedia Databases.

[BibT_eX]

Proceedings of the International Workshop on Multi-Media Database Management Systems, 1996

Automating the Assembly of Presentations from Multimedia Databases.

[BibT_eX]

[DOI]

Joel Kraft

Proceedings of the Twelfth International Conference on Data Engineering, February 26, 1996

VISUAL: A Graphical Icon-Based Query Language.

[BibT_eX]

[DOI]

Proceedings of the Twelfth International Conference on Data Engineering, February 26, 1996

Distributed Processing of Time-Constrained Queries in CASE-DB.

[BibT_eX]

[DOI]

Sungkil Lee

Proceedings of the CIKM '96, Proceedings of the Fifth International Conference on Information and Knowledge Management, November 12, 1996

Adaptive real-time transactions and risk-based load control.

[BibT_eX]

[DOI]

Proceedings of the Workshop on Databases - Active and Real-Time, 1996

1995

Temporal and Real-Time Databases: A Survey.

[BibT_eX]

[DOI]

Richard T. Snodgrass

IEEE Trans. Knowl. Data Eng., 1995

Guest Editors' Introduction to Special Section On Temporal and Real-Time Databases.

[BibT_eX]

[DOI]

Richard T. Snodgrass

IEEE Trans. Knowl. Data Eng., 1995

Time-Constrained Query Processing in CASE-DB.

[BibT_eX]

[DOI]

IEEE Trans. Knowl. Data Eng., 1995

1994

A Framework for Feature-Based Indexing for Spatial Databases.

[BibT_eX]

[DOI]

Nasser Yazdani

Proceedings of the Seventh International Working Conference on Scientific and Statistical Database Management, 1994

A Scientific Database System for Polymers and Materials Engineering Needs.

[BibT_eX]

[DOI]

Kumar V. Vadaparty

Proceedings of the Seventh International Working Conference on Scientific and Statistical Database Management, 1994

1993

Processing Time-Constrained Aggregate Queries in CASE-DB.

[BibT_eX]

[DOI]

ACM Trans. Database Syst., 1993

Near-Optimum Storage Models for Nested Relations Based on Workload Information.

[BibT_eX]

[DOI]

Aladdin Hafez

IEEE Trans. Knowl. Data Eng., 1993

Incomplete Relational Database Models Based on Intervals.

[BibT_eX]

[DOI]

Adegbeniga Ola

IEEE Trans. Knowl. Data Eng., 1993

Irreversibility problem in NL-class relations.

[BibT_eX]

[DOI]

Hsiu-Hsen Yao

Inf. Sci., 1993

Information loss in three cell-level control techniques for summary tables.

[BibT_eX]

[DOI]

JiYoung Chung

Inf. Sci., 1993

Example-Based Graphical Database Query Languages.

[BibT_eX]

[DOI]

Huaqing Wang

Computer, 1993

Towards a Unified Visual Database Access.

[BibT_eX]

[DOI]

Kumar V. Vadaparty

Y. Alp Aslandogan

Proceedings of the 1993 ACM SIGMOD International Conference on Management of Data, 1993

Modifying Datbase Queries and Error Constraints.

[BibT_eX]

[DOI]

Kaizheng Du

Proceedings of the Database and Expert Systems Applications, 4th International Conference, 1993

1992

Human factors study of two screen-oriented query languages: STBE and QBE.

[BibT_eX]

[DOI]

W. A. Abdul-Qader

Inf. Softw. Technol., 1992

Processing Real-Time, Non-Aggregate Queries with Time-Constraints in CASE-DB.

[BibT_eX]

[DOI]

Proceedings of the Eighth International Conference on Data Engineering, 1992

1991

Statistical Estimators for Aggregate Relational Algebra Queries.

[BibT_eX]

[DOI]

ACM Trans. Database Syst., 1991

Controlling FD and MVD Inferences in Multilevel Relational Database Systems.

[BibT_eX]

[DOI]

IEEE Trans. Knowl. Data Eng., 1991

Error-Constraint COUNT Query Evaluation in Relational Databases.

[BibT_eX]

[DOI]

Proceedings of the 1991 ACM SIGMOD International Conference on Management of Data, 1991

On Estimating COUNT, SUM, and AVERAGE.

[BibT_eX]

Proceedings of the Proceedings of the International Conference on Database and Expert Systems Applications, 1991

1990

On Inference Control in Semantic Data Models for Statistical Databases.

[BibT_eX]

[DOI]

J. Comput. Syst. Sci., 1990

A Scientific DBMS for Programmable Logic Controllers.

[BibT_eX]

[DOI]

Adegbemiga Ola

IEEE Data Eng. Bull., 1990

Database Systems for Programmable Logic Controllers.

[BibT_eX]

[DOI]

Adegbemiga Ola

Proceedings of the Statistical and Scientific Database Management, 1990

1989

Time-by-Example Query Language for Historical Databases.

[BibT_eX]

[DOI]

Abdullah Uz Tansel

M. Erol Arkun

IEEE Trans. Software Eng., 1989

A Relational Calculus with Set Operators, Its Safety and Equivalent Graphical Languages.

[BibT_eX]

[DOI]

Huaqing Wang

IEEE Trans. Software Eng., 1989

Query Processing Techniques in the Summary-Table-by-Example Database Query Language.

[BibT_eX]

[DOI]

Victor Matos

ACM Trans. Database Syst., 1989

A Family of Incomplete Relational Database Models.

[BibT_eX]

[DOI]

Adegbemiga Ola

Proceedings of the Fifteenth International Conference on Very Large Data Bases, 1989

On the Cell Suppression by Merging Technique in the Lattice Model of Summary Tables.

[BibT_eX]

[DOI]

JiYoung Chung

Proceedings of the 1989 IEEE Symposium on Security and Privacy, 1989

Real-Time Databases: Are they Real?

[BibT_eX]

Proceedings of the 1989 ACM SIGMOD International Conference on Management of Data, Portland, Oregon, USA, May 31, 1989

Processing Aggregate Relational Queries with Hard Time Constraints.

[BibT_eX]

[DOI]

Baldeo K. Taneja

Proceedings of the 1989 ACM SIGMOD International Conference on Management of Data, Portland, Oregon, USA, May 31, 1989

Multivalued Dependency Inferences in Multilevel Relational Database Systems.

[BibT_eX]

Proceedings of the Database Security, 1989

1988

The Partial Normalized Storage Model of Nested Relations.

[BibT_eX]

[DOI]

Aladdin Hafez

Proceedings of the Fourteenth International Conference on Very Large Data Bases, August 29, 1988

Statistical Estimators for Relational Algebra Expressions.

[BibT_eX]

[DOI]

Baldeo K. Taneja

Proceedings of the Seventh ACM SIGACT-SIGMOD-SIGART Symposium on Principles of Database Systems, 1988

1987

Extending Relational Algebra and Relational Calculus with Set-Valued Attributes and Aggregate Functions.

[BibT_eX]

[DOI]

Victor Matos

ACM Trans. Database Syst., 1987

Data Dependencies and Inference Control in Multilevel Relational Database Systems.

[BibT_eX]

[DOI]

Proceedings of the 1987 IEEE Symposium on Security and Privacy, 1987

Synthetic Query Response Construction in Scientific Databases with Time Constraints and Incomplete Information.

[BibT_eX]

[DOI]

Proceedings of the Third International Conference on Data Engineering, 1987

1986

The Design and Implementation of the SSDB.

[BibT_eX]

Proceedings of the Third International Workshop on Statistical and Scientific Database Management, 1986

Information Loss in the Lattice Model of Summary Tables due to Cell Suppression.

[BibT_eX]

[DOI]

JiYoung Chung

Proceedings of the Second International Conference on Data Engineering, 1986

1985

Statistical Database Query Languages.

[BibT_eX]

[DOI]

IEEE Trans. Software Eng., 1985

Rounding and Inference Controlin Conceptual Models for Statistical Databases.

[BibT_eX]

[DOI]

Proceedings of the 1985 IEEE Symposium on Security and Privacy, 1985

A Language and a Physical Organization Technique for Summary Tables.

[BibT_eX]

[DOI]

Francisco Mata

Proceedings of the 1985 ACM SIGMOD International Conference on Management of Data, 1985

On Optimizing Summary-Table-by-Example Queries.

[BibT_eX]

[DOI]

Victor Matos

Proceedings of the Fourth ACM SIGACT-SIGMOD Symposium on Principles of Database Systems, 1985

A Query Language for Statistical Databases

[BibT_eX]

Proceedings of the Query Processing in Database Systems, 1985

1984

Statistical Databases.

[BibT_eX]

[DOI]

Proceedings of the Tenth International Conference on Very Large Data Bases, 1984

Summary-Table-By-Example: A Database Query Language for Manipulating Summary Data.

[BibT_eX]

[DOI]

Proceedings of the First International Conference on Data Engineering, 1984

1983

An Extension of Relational Algebra for Summary Tables.

[BibT_eX]

[DOI]

Proceedings of the Second International Workshop on Statistical Database Management, 1983

Features of a System for Statistical Databases.

[BibT_eX]

[DOI]

Proceedings of the Second International Workshop on Statistical Database Management, 1983

1982

Enhancing the Security of Statistical Databases with a Question-Answering System and a Kernel Design.

[BibT_eX]

[DOI]

IEEE Trans. Software Eng., 1982

Auditing and Inference Control in Statistical Databases.

[BibT_eX]

[DOI]

IEEE Trans. Software Eng., 1982

1981

Statistical Database Design.

[BibT_eX]

[DOI]

ACM Trans. Database Syst., 1981

Update Handling Techniques in Statistical Databases.

[BibT_eX]

[DOI]

Proceedings of the First LBL Workshop on Statistical Database Management, 1981

Auditing for secure statistical databases.

[BibT_eX]

[DOI]