Guanming Wu

Orcid: 0000-0001-8196-1177

According to our database1, Guanming Wu authored at least 26 papers between 2006 and 2024.

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Bibliography

2024
Pathway-based, reaction-specific annotation of disease variants for elucidation of molecular phenotypes.
Database J. Biol. Databases Curation, January, 2024

Data Valuation with Gradient Similarity.
CoRR, 2024

2023
Biology-inspired graph neural network encodes reactome and reveals biochemical reactions of disease.
Patterns, July, 2023

Ontology-based Representation and Analysis of Conditional Vaccine Immune Responses Using Omics Data.
Proceedings of the International Conference on Biomedical Ontologies 2023 together with the Workshop on Ontologies for Infectious and Immune-Mediated Disease Data Science (OIIDDS 2023) and the FAIR Ontology Harmonization and TRUST Data Interoperability Workshop (FOHTI 2023), Brasília, Brazil, August 28, 2023

2022
The reactome pathway knowledgebase 2022.
Nucleic Acids Res., 2022

2021
Leveraging biochemical reactions to unravel functional impacts of cancer somatic variants affecting protein interaction interfaces.
F1000Research, 2021

CIDO ontology updates and secondary analysis of host responses to COVID-19 infection based on ImmPort reports and literature.
J. Biomed. Semant., 2021

2020
Perform Pathway Enrichment Analysis Using ReactomeFIViz.
Proceedings of the Protein-Protein Interaction Networks, Methods and Protocols., 2020

Analyses of non-coding somatic drivers in 2,658 cancer whole genomes.
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Nat., 2020

The reactome pathway knowledgebase.
Nucleic Acids Res., 2020

2019
VIO: ontology classification and study of vaccine responses given various experimental and analytical conditions.
BMC Bioinform., 2019

Reactome and ORCID - fine-grained credit attribution for community curation.
Database J. Biol. Databases Curation, 2019

2018
Reactome graph database: Efficient access to complex pathway data.
PLoS Comput. Biol., 2018

The Reactome Pathway Knowledgebase.
Nucleic Acids Res., 2018

Automation of ReactomeFIViz via CyREST API.
F1000Research, 2018

2017
Plant Reactome: a resource for plant pathways and comparative analysis.
Nucleic Acids Res., 2017

2016
Reactome from a WikiPathways Perspective.
PLoS Comput. Biol., 2016

The Reactome pathway Knowledgebase.
Nucleic Acids Res., 2016

2014
Gramene 2013: comparative plant genomics resources.
Nucleic Acids Res., 2014

The Reactome pathway knowledgebase.
Nucleic Acids Res., 2014

ReactomeFIViz: the Reactome FI Cytoscape app for pathway and network-based data analysis.
F1000Research, 2014

A controlled vocabulary for pathway entities and events.
Database J. Biol. Databases Curation, 2014

2011
Reactome: a database of reactions, pathways and biological processes.
Nucleic Acids Res., 2011

2009
Reactome knowledgebase of human biological pathways and processes.
Nucleic Acids Res., 2009

2007
Reactome: An integrated expert model of human molecular processes and access toolkit.
J. Integr. Bioinform., 2007

2006
Reactome - A Knowledgebase of Biological Pathways.
Proceedings of the On the Move to Meaningful Internet Systems 2006: OTM 2006 Workshops, 2006


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