Graciela Gonzalez-Hernandez
Orcid: 0000-0002-6416-9556Affiliations:
- University of Pennsylvania: Philadelphia, USA
According to our database1,
Graciela Gonzalez-Hernandez
authored at least 109 papers
between 1998 and 2024.
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Bibliography
2024
J. Biomed. Informatics, 2024
Overview of the 8th Social Media Mining for Health Applications (#SMM4H) shared tasks at the AMIA 2023 Annual Symposium.
J. Am. Medical Informatics Assoc., 2024
Reddit-Impacts: A Named Entity Recognition Dataset for Analyzing Clinical and Social Effects of Substance Use Derived from Social Media.
CoRR, 2024
2023
Automatic Extraction of Medication Mentions from Tweets - Overview of the BioCreative VII Shared Task 3 Competition.
Database J. Biol. Databases Curation, February, 2023
BioData Min., January, 2023
2022
Challenges and opportunities for mining adverse drug reactions: perspectives from pharma, regulatory agencies, healthcare providers and consumers.
Database J. Biol. Databases Curation, 2022
Overview of the Seventh Social Media Mining for Health Applications (#SMM4H) Shared Tasks at COLING 2022.
Proceedings of The Seventh Workshop on Social Media Mining for Health Applications, 2022
2021
Text classification models for the automatic detection of nonmedical prescription medication use from social media.
BMC Medical Informatics Decis. Mak., 2021
Active neural networks to detect mentions of changes to medication treatment in social media.
J. Am. Medical Informatics Assoc., 2021
DeepADEMiner: a deep learning pharmacovigilance pipeline for extraction and normalization of adverse drug event mentions on Twitter.
J. Am. Medical Informatics Assoc., 2021
ReportAGE: Automatically extracting the exact age of Twitter users based on self-reports in tweets.
CoRR, 2021
Overview of the Sixth Social Media Mining for Health Applications (#SMM4H) Shared Tasks at NAACL 2021.
Proceedings of the Sixth Social Media Mining for Health Workshop and Shared Task, 2021
Proceedings of the Biocomputing 2021: Proceedings of the Pacific Symposium, 2021
Addressing Extreme Imbalance for Detecting Medications Mentioned in Twitter User Timelines.
Proceedings of the Artificial Intelligence in Medicine, 2021
2020
GeoBoost2: a natural languageprocessing pipeline for GenBank metadata enrichment for virus phylogeography.
Bioinform., 2020
BioData Min., 2020
Overview of the Fifth Social Media Mining for Health Applications (#SMM4H) Shared Tasks at COLING 2020.
Proceedings of the Fifth Social Media Mining for Health Applications Workshop & Shared Task, 2020
UPennHLP at WNUT-2020 Task 2 : Transformer models for classification of COVID19 posts on Twitter.
Proceedings of the Sixth Workshop on Noisy User-generated Text, 2020
2019
npj Digit. Medicine, 2019
An interpretable natural language processing system for written medical examination assessment.
J. Biomed. Informatics, 2019
J. Am. Medical Informatics Assoc., 2019
Comment on: "Deep learning for pharmacovigilance: recurrent neural network architectures for labeling adverse drug reactions in Twitter posts".
J. Am. Medical Informatics Assoc., 2019
Automatically Identifying Comparator Groups on Twitter for Digital Epidemiology of Pregnancy Outcomes.
CoRR, 2019
Disease associations depend on visit type: results from a visit-wide association study.
BioData Min., 2019
Overview of the Fourth Social Media Mining for Health (SMM4H) Shared Tasks at ACL 2019.
Proceedings of the Fourth Social Media Mining for Health Application Workshop & Shared Task, 2019
Proceedings of the 13th International Workshop on Semantic Evaluation, 2019
Bi-directional Recurrent Neural Network Models for Geographic Location Extraction in Biomedical Literature.
Proceedings of the Biocomputing 2019: Proceedings of the Pacific Symposium, 2019
Proceedings of the Biocomputing 2019: Proceedings of the Pacific Symposium, 2019
Towards Automating Location-Specific Opioid Toxicosurveillance from Twitter via Data Science Methods.
Proceedings of the MEDINFO 2019: Health and Wellbeing e-Networks for All, 2019
2018
An unsupervised and customizable misspelling generator for mining noisy health-related text sources.
J. Biomed. Informatics, 2018
Social media mining for birth defects research: A rule-based, bootstrapping approach to collecting data for rare health-related events on Twitter.
J. Biomed. Informatics, 2018
Data and systems for medication-related text classification and concept normalization from Twitter: insights from the Social Media Mining for Health (SMM4H)-2017 shared task.
J. Am. Medical Informatics Assoc., 2018
Automatically Detecting Self-Reported Birth Defect Outcomes on Twitter for Large-scale Epidemiological Research.
CoRR, 2018
GeoBoost: accelerating research involving the geospatial metadata of virus GenBank records.
Bioinform., 2018
Deep neural networks and distant supervision for geographic location mention extraction.
Bioinform., 2018
Overview of the Third Social Media Mining for Health (SMM4H) Shared Tasks at EMNLP 2018.
Proceedings of the 2018 EMNLP Workshop SMM4H: The 3rd Social Media Mining for Health Applications Workshop & Shared Task, 2018
Proceedings of the 2018 EMNLP Workshop SMM4H: The 3rd Social Media Mining for Health Applications Workshop & Shared Task, 2018
Proceedings of the Biocomputing 2018: Proceedings of the Pacific Symposium, 2018
Clinical NER and Relation Extraction using Bi-Char-LSTMs and Random Forest Classifiers.
Proceedings of the 1st International Workshop on Medication and Adverse Drug Event Detection, 2018
A Rule-based Approach to Determining Pregnancy Timeframe from Contextual Social Media Postings.
Proceedings of the 2018 International Conference on Digital Health, 2018
2017
Social media mining for identification and exploration of health-related information from pregnant women.
CoRR, 2017
Named entity linking of geospatial and host metadata in GenBank for advancing biomedical research.
Database J. Biol. Databases Curation, 2017
HLP$@$UPenn at SemEval-2017 Task 4A: A simple, self-optimizing text classification system combining dense and sparse vectors.
Proceedings of the 11th International Workshop on Semantic Evaluation, 2017
Detecting Personal Medication Intake in Twitter: An Annotated Corpus and Baseline Classification System.
Proceedings of the BioNLP 2017, Vancouver, Canada, August 4, 2017, 2017
Overview of the Second Social Media Mining for Health (SMM4H) Shared Tasks at AMIA 2017.
Proceedings of the 2nd Social Media Mining for Health Research and Applications Workshop co-located with the American Medical Informatics Association Annual Symposium (AMIA 2017), 2017
Proceedings of the 2nd Social Media Mining for Health Research and Applications Workshop co-located with the American Medical Informatics Association Annual Symposium (AMIA 2017), 2017
Hybrid Semantic Analysis for Mapping Adverse Drug Reaction Mentions in Tweets to Medical Terminology.
Proceedings of the AMIA 2017, 2017
2016
Analysis of the effect of sentiment analysis on extracting adverse drug reactions from tweets and forum posts.
J. Biomed. Informatics, 2016
A high-precision rule-based extraction system for expanding geospatial metadata in GenBank records.
J. Am. Medical Informatics Assoc., 2016
CoRR, 2016
Recent Advances and Emerging Applications in Text and Data Mining for Biomedical Discovery.
Briefings Bioinform., 2016
DiegoLab16 at SemEval-2016 Task 4: Sentiment Analysis in Twitter using Centroids, Clusters, and Sentiment Lexicons.
Proceedings of the 10th International Workshop on Semantic Evaluation, 2016
Finding Potentially Unsafe Nutritional Supplements from User Reviews with Topic Modeling.
Proceedings of the Biocomputing 2016: Proceedings of the Pacific Symposium, 2016
Proceedings of the Biocomputing 2016: Proceedings of the Pacific Symposium, 2016
Proceedings of the Biocomputing 2016: Proceedings of the Pacific Symposium, 2016
Automatic Prediction of Linguistic Decline in Writings of Subjects with Degenerative Dementia.
Proceedings of the NAACL HLT 2016, 2016
Proceedings of the Fifth Workshop on Building and Evaluating Resources for Biomedical Text Mining, 2016
2015
J. Biomed. Informatics, 2015
Portable automatic text classification for adverse drug reaction detection via multi-corpus training.
J. Biomed. Informatics, 2015
Pharmacovigilance from social media: mining adverse drug reaction mentions using sequence labeling with word embedding cluster features.
J. Am. Medical Informatics Assoc., 2015
Knowledge-driven geospatial location resolution for phylogeographic models of virus migration.
Bioinform., 2015
Proceedings of the 9th International Workshop on Semantic Evaluation, 2015
Proceedings of the Biocomputing 2015: Proceedings of the Pacific Symposium, 2015
2014
Database J. Biol. Databases Curation, 2014
Database J. Biol. Databases Curation, 2014
Proceedings of the Biocomputing 2014: Proceedings of the Pacific Symposium, 2014
Natural Language Processing Methods for Enhancing Geographic Metadata for Phylogeography of Zoonotic Viruses.
Proceedings of BioNLP, Baltimore, Maryland, USA, 2014
Text Classification towards Detecting Misdiagnosis of an Epilepsy Syndrome in a Pediatric Population.
Proceedings of the AMIA 2014, 2014
Proceedings of the AMIA 2014, 2014
2013
Towards generating a patient's timeline: Extracting temporal relationships from clinical notes.
J. Biomed. Informatics, 2013
Proceedings of the Biocomputing 2013: Proceedings of the Pacific Symposium, 2013
2012
IEEE Trans. Knowl. Data Eng., 2012
J. Biomed. Informatics, 2012
Proceedings of the 3rd International Conference on Biomedical Ontology (ICBO 2012), 2012
Automatic Approaches for Gene-Drug Interaction Extraction from Biomedical Text: Corpus and Comparative Evaluation.
Proceedings of the 2012 Workshop on Biomedical Natural Language Processing, 2012
2011
J. Biomed. Informatics, 2011
Biomedical Informatics in Translational Research, Hai Hu, Richard J. Mural, Michael N. Liebman (Eds.). Artech House (2008).
J. Biomed. Informatics, 2011
BioSimplify: an open source sentence simplification engine to improve recall in automatic biomedical information extraction
CoRR, 2011
The Protein-Protein Interaction tasks of BioCreative III: classification/ranking of articles and linking bio-ontology concepts to full text.
BMC Bioinform., 2011
Proceedings of the Biocomputing 2011: Proceedings of the Pacific Symposium, 2011
Proceedings of the 10th International Conference on Machine Learning and Applications and Workshops, 2011
Evaluating Distributional Semantic and Feature Selection for Extracting Relationships from Biological Text.
Proceedings of the 10th International Conference on Machine Learning and Applications and Workshops, 2011
Proceedings of the 2nd International Conference on Biomedical Ontology, 2011
Proceedings of BioNLP Shared Task 2011 Workshop, Portland, Oregon, USA, June 24, 2011, 2011
2010
IEEE ACM Trans. Comput. Biol. Bioinform., 2010
Proceedings of the 26th International Conference on Data Engineering, 2010
A Distributional Semantics Approach to Simultaneous Recognition of Multiple Classes of Named Entities.
Proceedings of the Computational Linguistics and Intelligent Text Processing, 2010
Towards Internet-Age Pharmacovigilance: Extracting Adverse Drug Reactions from User Posts in Health-Related Social Networks.
Proceedings of the 2010 Workshop on Biomedical Natural Language Processing, 2010
2009
Querying Parse Tree Database of Medline Text to Synthesize User-Specific Biomolecular Networks.
Proceedings of the Biocomputing 2009: Proceedings of the Pacific Symposium, 2009
Towards Effective Sentence Simplification for Automatic Processing of Biomedical Text.
Proceedings of the Human Language Technologies: Conference of the North American Chapter of the Association of Computational Linguistics, Proceedings, May 31, 2009
Proceedings of the BioNLP 2009 Workshop Companion Volume for Shared Task, BioNLP@HLT-NAACL 2009, 2009
2008
Proceedings of the Biocomputing 2008, 2008
Proceedings of the ECCB'08 Proceedings, 2008
2007
Proceedings of The Sixteenth Text REtrieval Conference, 2007
Mining Gene-Disease Relationships from Biomedical Literature: Weighting Proteinprotein Interactions and Connectivity.
Proceedings of the Biocomputing 2007, 2007
Web Service Orchestration for Bioinformatics Systems: Challenges and Current Workflow Definition Approaches.
Proceedings of the 2007 IEEE International Conference on Web Services (ICWS 2007), 2007
2006
Proceedings of the Fifteenth Text REtrieval Conference, 2006
A systematic approach to active and cooperative learning in CS1 and its effects on CS2.
Proceedings of the 37th SIGCSE Technical Symposium on Computer Science Education, 2006
2005
Genomic Information Retrieval Through Selective Extraction and Tagging by the ASU-BioAL Group.
Proceedings of the Fourteenth Text REtrieval Conference, 2005
2002
Modeling Multimedia Displays Using Action Based Temporal Logic.
Proceedings of the Visual and Multimedia Information Management, 2002
1999
Specifying Generic Multimedia 3D Visualizations and Temporal Presentations from Database Queries.
Proceedings of the IEEE International Conference on Multimedia Computing and Systems, 1999
1998
Proceedings of the 6th ACM International Conference on Multimedia '98, 1998
Proceedings of the Fourteenth International Conference on Data Engineering, 1998