Glenn Hickey

According to our database, Glenn Hickey authored at least 18 papers between 2005 and 2021.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of three.

2021

Efficient dynamic variation graphs.

Jordan M. Eizenga, Adam M. Novak, Emily Kobayashi, Flavia Villani, Cecilia Cisar, Simon Heumos, Glenn Hickey, Vincenza Colonna, Benedict Paten, Erik Garrison

Bioinform., 2021

2019

Sequence tube maps: making graph genomes intuitive to commuters.

Wolfgang Beyer, Adam M. Novak, Glenn Hickey, Jeffrey Chan, Vanessa Tan, Benedict Paten, Daniel R. Zerbino

Bioinform., 2019

2018

Superbubbles, Ultrabubbles, and Cacti.

Benedict Paten, Jordan M. Eizenga, Yohei M. Rosen, Adam M. Novak, Erik Garrison, Glenn Hickey

J. Comput. Biol., 2018

2017

Superbubbles, Ultrabubbles and Cacti.

Benedict Paten, Adam M. Novak, Erik Garrison, Glenn Hickey

Proceedings of the Research in Computational Molecular Biology, 2017

2016

Representing and decomposing genomic structural variants as balanced integer flows on sequence graphs.

Daniel R. Zerbino, Tracy Ballinger, Benedict Paten, Glenn Hickey, David Haussler

BMC Bioinform., 2016

2015

The UCSC Genome Browser database: 2015 update.

Kate R. Rosenbloom, Joel Armstrong, Galt P. Barber, Jonathan Casper, Hiram Clawson, Mark Diekhans, Timothy R. Dreszer, Pauline A. Fujita, Luvina Guruvadoo, Maximilian Haeussler, Rachel A. Harte, Steven G. Heitner, Glenn Hickey, Angie S. Hinrichs, Robert Hubley, Donna Karolchik, Katrina Learned, Brian T. Lee, Chin H. Li, Karen H. Miga, Ngan Nguyen, Benedict Paten, Brian J. Raney, Arian F. A. Smit, Matthew L. Speir, Ann S. Zweig, David Haussler, Robert M. Kuhn, W. James Kent

Nucleic Acids Res., 2015

Building a Pan-Genome Reference for a Population.

Ngan Nguyen, Glenn Hickey, Daniel R. Zerbino, Brian J. Raney, Dent Earl, Joel Armstrong, W. James Kent, David Haussler, Benedict Paten

J. Comput. Biol., 2015

2014

A unifying model of genome evolution under parsimony.

Benedict Paten, Daniel R. Zerbino, Glenn Hickey, David Haussler

BMC Bioinform., 2014

Comparative assembly hubs: Web-accessible browsers for comparative genomics.

Ngan Nguyen, Glenn Hickey, Brian J. Raney, Joel Armstrong, Hiram Clawson, Ann S. Zweig, Donna Karolchik, William James Kent, David Haussler, Benedict Paten

Bioinform., 2014

Building a Pangenome Reference for a Population.

Ngan Nguyen, Glenn Hickey, Daniel R. Zerbino, Brian J. Raney, Dent Earl, Joel Armstrong, David Haussler, Benedict Paten

Proceedings of the Research in Computational Molecular Biology, 2014

2013

HAL: a hierarchical format for storing and analyzing multiple genome alignments.

Glenn Hickey, Benedict Paten, Dent Earl, Daniel R. Zerbino, David Haussler

Bioinform., 2013

2011

An Approximation Algorithm for the Noah's Ark Problem with Random Feature Loss.

Glenn Hickey, Mathieu Blanchette, Paz Carmi, Anil Maheshwari, Norbert Zeh

IEEE ACM Trans. Comput. Biol. Bioinform., 2011

A Probabilistic Model for Sequence Alignment with Context-Sensitive Indels.

Glenn Hickey, Mathieu Blanchette

J. Comput. Biol., 2011

2010

Parallel catastrophe modelling on a Cell/BE.

Frank K. H. A. Dehne, Glenn Hickey, Andrew Rau-Chaplin, Mark Byrne

Int. J. Parallel Emergent Distributed Syst., 2010

A Practical Algorithm for Estimation of the Maximum Likelihood Ancestral Reconstruction Error.

Glenn Hickey, Mathieu Blanchette

Proceedings of the Biocomputing 2010: Proceedings of the Pacific Symposium, 2010

2009

Parallel catastrophe modelling on a cell processor.

Frank K. H. A. Dehne, Glenn Hickey, Andrew Rau-Chaplin, Mark Byrne

Proceedings of the 2009 conference of the Centre for Advanced Studies on Collaborative Research, 2009

2008

NAPX: A Polynomial Time Approximation Scheme for the Noah's Ark Problem.

Glenn Hickey, Paz Carmi, Anil Maheshwari, Norbert Zeh

Proceedings of the Algorithms in Bioinformatics, 8th International Workshop, 2008

2005

Fast Parallel Maximum Likelihood-Based Protein Phylogeny.

Christian Blouin, Davin Butt, Glenn Hickey, Andrew Rau-Chaplin

Proceedings of the ISCA 18th International Conference on Parallel and Distributed Computing Systems, 2005