Giovanni Minervini

According to our database, Giovanni Minervini authored at least 21 papers between 2007 and 2023.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2023

RING-PyMOL: residue interaction networks of structural ensembles and molecular dynamics.

Alessio Del Conte, Alexander Miguel Monzon, Damiano Clementel, Giorgia F. Camagni, Giovanni Minervini, Silvio C. E. Tosatto, Damiano Piovesan

Bioinform., May, 2023

2022

DisProt in 2022: improved quality and accessibility of protein intrinsic disorder annotation.

Federica Quaglia, Bálint Mészáros, Edoardo Salladini, András Hatos, Rita Pancsa, Lucía B. Chemes, Mátyás Pajkos, Tamas Lazar, Samuel Peña-Díaz, Jaime Santos, Veronika Ács, Nazanin Farahi, Erzsébet Fichó, Maria Cristina Aspromonte, Claudio Bassot, Anastasia Chasapi, Norman E. Davey, Radoslav Davidovic, Laszlo Dobson, Arne Elofsson, Gábor Erdös, Pascale Gaudet, Michelle G. Giglio, Juliana Glavina, Javier Iserte, Valentín Iglesias, Zsófia L. Kálmán, Matteo Lambrughi, Emanuela Leonardi, Sonia Longhi, Sandra Macedo-Ribeiro, Emiliano Maiani, Julia Marchetti, Cristina Marino Buslje, Attila Meszaros, Alexander Miguel Monzon, Giovanni Minervini, Suvarna Nadendla, Juliet F. Nilsson, Marián Novotný, Christos A. Ouzounis, Nicolas Palopoli, Elena Papaleo, Pedro J. Barbosa Pereira, Gabriele Pozzati, Vasilis J. Promponas, Jordi Pujols, Alma Carolina Sanchez Rocha, Martin Salas, Luciana Rodriguez Sawicki, Éva Schád, Aditi Shenoy, Tamás Szaniszló, Konstantinos D. Tsirigos, Nevena Veljkovic, Gustavo D. Parisi, Salvador Ventura, Zsuzsanna Dosztányi, Peter Tompa, Silvio C. E. Tosatto, Damiano Piovesan

Nucleic Acids Res., 2022

RING 3.0: fast generation of probabilistic residue interaction networks from structural ensembles.

Damiano Clementel, Alessio Del Conte, Alexander Miguel Monzon, Giorgia F. Camagni, Giovanni Minervini, Damiano Piovesan, Silvio C. E. Tosatto

Nucleic Acids Res., 2022

Mocafe: a comprehensive Python library for simulating cancer development with Phase Field Models.

Franco Pradelli, Giovanni Minervini, Silvio C. E. Tosatto

Bioinform., 2022

2020

Assessing predictors for new post translational modification sites: A case study on hydroxylation.

Damiano Piovesan, András Hatos, Giovanni Minervini, Federica Quaglia, Alexander Miguel Monzon, Silvio C. E. Tosatto

PLoS Comput. Biol., 2020

DisProt: intrinsic protein disorder annotation in 2020.

András Hatos, Borbála Hajdu-Soltész, Alexander Miguel Monzon, Nicolas Palopoli, Lucía Álvarez, Burcu Aykaç Fas, Claudio Bassot, Guillermo I. Benítez, Martina Bevilacqua, Anastasia Chasapi, Lucía B. Chemes, Norman E. Davey, Radoslav Davidovic, A. Keith Dunker, Arne Elofsson, Julien Gobeill, Nicolás S. González Foutel, Govindarajan Sudha, Mainak Guharoy, Tamás Horváth, Valentin Iglesias, Andrey V. Kajava, Orsolya P. Kovács, John Lamb, Matteo Lambrughi, Tamas Lazar, Jeremy Y. Leclercq, Emanuela Leonardi, Sandra Macedo-Ribeiro, Mauricio Macossay-Castillo, Emiliano Maiani, José A. Manso, Cristina Marino Buslje, Elizabeth Martínez-Pérez, Bálint Mészáros, Ivan Micetic, Giovanni Minervini, Nikoletta Murvai, Marco Necci, Christos A. Ouzounis, Mátyás Pajkos, Lisanna Paladin, Rita Pancsa, Elena Papaleo, Gustavo D. Parisi, Emilie Pasche, Pedro J. Barbosa Pereira, Vasilis J. Promponas, Jordi Pujols, Federica Quaglia, Patrick Ruch, Marco Salvatore, Éva Schád, Beáta Szabó, Tamás Szaniszló, Stella Tamana, Ágnes Tantos, Nevena Veljkovic, Salvador Ventura, Wim F. Vranken, Zsuzsanna Dosztányi, Peter Tompa, Silvio C. E. Tosatto, Damiano Piovesan

Nucleic Acids Res., 2020

2019

Genotype-phenotype relations of the von Hippel-Lindau tumor suppressor inferred from a large-scale analysis of disease mutations and interactors.

Giovanni Minervini, Federica Quaglia, Francesco Tabaro, Silvio C. E. Tosatto

PLoS Comput. Biol., 2019

2017

DisProt 7.0: a major update of the database of disordered proteins.

Damiano Piovesan, Francesco Tabaro, Ivan Micetic, Marco Necci, Federica Quaglia, Christopher J. Oldfield, Maria Cristina Aspromonte, Norman E. Davey, Radoslav Davidovic, Zsuzsanna Dosztányi, Arne Elofsson, Alessandra Gasparini, András Hatos, Andrey V. Kajava, Lajos Kalmár, Emanuela Leonardi, Tamas Lazar, Sandra Macedo-Ribeiro, Mauricio Macossay-Castillo, Attila Meszaros, Giovanni Minervini, Nikoletta Murvai, Jordi Pujols, Daniel B. Roche, Edoardo Salladini, Éva Schád, Antoine Schramm, Beáta Szabó, Ágnes Tantos, Fiorella Tonello, Konstantinos D. Tsirigos, Nevena Veljkovic, Salvador Ventura, Wim F. Vranken, Per Warholm, Vladimir N. Uversky, A. Keith Dunker, Sonia Longhi, Peter Tompa, Silvio C. E. Tosatto

Nucleic Acids Res., 2017

FELLS: fast estimator of latent local structure.

Damiano Piovesan, Ian Walsh, Giovanni Minervini, Silvio C. E. Tosatto

Bioinform., 2017

In silico study of the structure and function of Streptococcus mutans plasmidic proteins.

Silvia Caprari, Giovanni Minervini, Valentina Brandi, Fabio Polticelli

Bio Algorithms Med Syst., 2017

2016

The RING 2.0 web server for high quality residue interaction networks.

Damiano Piovesan, Giovanni Minervini, Silvio C. E. Tosatto

Nucleic Acids Res., 2016

Naïve Bayes ant colony optimization for designing high dimensional experiments.

Matteo Borrotti, Giovanni Minervini, Davide De Lucrezia, Irene Poli

Appl. Soft Comput., 2016

2014

RepeatsDB: a database of tandem repeat protein structures.

Tomás Di Domenico, Emilio Potenza, Ian Walsh, R. Gonzalo Parra, Manuel Giollo, Giovanni Minervini, Damiano Piovesan, Awais Ihsan, Carlo Ferrari, Andrey V. Kajava, Silvio C. E. Tosatto

Nucleic Acids Res., 2014

2012

RAPHAEL: recognition, periodicity and insertion assignment of solenoid protein structures.

Ian Walsh, Francesco Sirocco, Giovanni Minervini, Tomás Di Domenico, Carlo Ferrari, Silvio C. E. Tosatto

Bioinform., 2012

Bluues server: electrostatic properties of wild-type and mutated protein structures.

Ian Walsh, Giovanni Minervini, Alessandra Corazza, Gennaro Esposito, Silvio C. E. Tosatto, Federico Fogolari

Bioinform., 2012

In silico blood genotyping from exome sequencing data.

Manuel Giollo, Giovanni Minervini, Marta Scalzotto, Emanuela Leonardi, Carlo Ferrari, Silvio C. E. Tosatto

Proceedings of the Workshop on Annotation, 2012

2011

Ab initio protein structure prediction - the hydrophobicity distribution analysis.

Giuseppe Evangelista, Giovanni Minervini, Fabio Polticelli, Maciej Malawski, Tomasz Szepieniec, Lukasz Flis, Katarzyna Prymula, Marek Kochanczyk, Ewa Matczynska, Zdzislaw Wisniowski, Kinga Salapa, Mateusz Banach, Irena Roterman

Bio Algorithms Med Syst., 2011

2010

A Model Based Ant Colony Design for the Protein Engineering Problem.

Matteo Borrotti, Davide De Lucrezia, Giovanni Minervini, Irene Poli

Proceedings of the Swarm Intelligence - 7th International Conference, 2010

2009

Massive non-natural proteins structure prediction using grid technologies.

Giovanni Minervini, Giuseppe Evangelista, Laura Villanova, Debora Slanzi, Davide De Lucrezia, Irene Poli, Pier Luigi Luisi, Fabio Polticelli

BMC Bioinform., 2009

2007

High throughput protein structure prediction in a grid environment.

Giovanni Minervini, Giuseppe La Rocca, Pier Luigi Luisi, Fabio Polticelli

Bio Algorithms Med Syst., 2007

RandomBlast a tool to generate random "never born protein" sequences.

Giuseppe Evangelista, Giovanni Minervini, Pier Luigi Luisi, Fabio Polticelli

Bio Algorithms Med Syst., 2007