Giovanni Bottegoni

According to our database, Giovanni Bottegoni authored at least 11 papers between 2006 and 2024.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2024

Comparative Study of Allosteric GPCR Binding Sites and Their Ligandability Potential.

Sonja Peter, Lydia Siragusa, Morgan Thomas, Tommaso Palomba, Simon Cross, Noel M. O'boyle, Dávid Bajusz, György G. Ferenczy, György M. Keserü, Giovanni Bottegoni, Brian Joseph Bender, I-Jen Chen, Chris de Graaf

J. Chem. Inf. Model., 2024

2018

Addendum to BiKi Life Sciences: A New Suite for Molecular Dynamics and Related Methods in Drug Discovery.

Sergio Decherchi, Giovanni Bottegoni, Andrea Spitaleri, Walter Rocchia, Andrea Cavalli

J. Chem. Inf. Model., 2018

BiKi Life Sciences: A New Suite for Molecular Dynamics and Related Methods in Drug Discovery.

Sergio Decherchi, Giovanni Bottegoni, Andrea Spitaleri, Walter Rocchia, Andrea Cavalli

J. Chem. Inf. Model., 2018

2015

Structure-Based Predictions of Activity Cliffs.

Jarmila Husby, Giovanni Bottegoni, Irina Kufareva, Ruben Abagyan, Andrea Cavalli

J. Chem. Inf. Model., 2015

2012

Combining Dyad Protonation and Active Site Plasticity in BACE-1 Structure-Based Drug Design.

Puneet Kacker, Matteo Masetti, Martina Mangold, Giovanni Bottegoni, Andrea Cavalli

J. Chem. Inf. Model., 2012

2011

SERAPhiC: A Benchmark for in Silico Fragment-Based Drug Design.

Angelo D. Favia, Giovanni Bottegoni, Irene Nobeli, Paola Bisignano, Andrea Cavalli

J. Chem. Inf. Model., 2011

2010

Recipes for the Selection of Experimental Protein Conformations for Virtual Screening.

Manuel Rueda, Giovanni Bottegoni, Ruben Abagyan

J. Chem. Inf. Model., 2010

2009

Consistent Improvement of Cross-Docking Results Using Binding Site Ensembles Generated with Elastic Network Normal Modes.

Manuel Rueda, Giovanni Bottegoni, Ruben Abagyan

J. Chem. Inf. Model., 2009

2008

A new method for ligand docking to flexible receptors by dual alanine scanning and refinement (SCARE).

Giovanni Bottegoni, Irina Kufareva, Maxim Totrov, Ruben Abagyan

J. Comput. Aided Mol. Des., 2008

2006

A Comparative Study on the Application of Hierarchical-Agglomerative Clustering Approaches to Organize Outputs of Reiterated Docking Runs.

Giovanni Bottegoni, Andrea Cavalli, Maurizio Recanatini

J. Chem. Inf. Model., 2006

AClAP, Autonomous hierarchical agglomerative Cluster Analysis based protocol to partition conformational datasets.

Giovanni Bottegoni, Walter Rocchia, Maurizio Recanatini, Andrea Cavalli

Proceedings of the Proceedings 14th International Conference on Intelligent Systems for Molecular Biology 2006, 2006