Gianmaria Silvello

Orcid: 0000-0003-4970-4554

Affiliations:
  • University of Padua, Department of Information Engineering, Italy


According to our database1, Gianmaria Silvello authored at least 185 papers between 2007 and 2024.

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Bibliography

2024
MetaTron: advancing biomedical annotation empowering relation annotation and collaboration.
BMC Bioinform., December, 2024

An extensible and unifying approach to retrospective clinical data modeling: the BrainTeaser Ontology.
J. Biomed. Semant., December, 2024

Methods for generation, recommendation, exploration and analysis of scholarly publications.
Int. J. Digit. Libr., September, 2024

Efficient and Reliable Estimation of Knowledge Graph Accuracy.
Proc. VLDB Endow., May, 2024

Multimodal representations of biomedical knowledge from limited training whole slide images and reports using deep learning.
Medical Image Anal., 2024

Can we measure the impact of a database?
CoRR, 2024

Automatic Labels are as Effective as Manual Labels in Biomedical Images Classification with Deep Learning.
CoRR, 2024

A Provenance-Based Caching System to Speed-up SPARQL Query Answering.
Proceedings of the 32nd Symposium of Advanced Database Systems, 2024

Bootstrapping Gene Expression-Cancer Knowledge Bases with Limited Human Annotations.
Proceedings of the 32nd Symposium of Advanced Database Systems, 2024

Reproducibility and Analysis of Scientific Dataset Recommendation Methods.
Proceedings of the 18th ACM Conference on Recommender Systems, 2024

Publishing CoreKB Facts as Nanopublications.
Proceedings of the 20th Conference on Information and Research science Connecting to Digital and Library science (formerly the Italian Research Conference on Digital Libraries), Bressanone, Brixen, Italy, 2024

Content-Based Dataset Retrieval Methods: Reproducibility of the ACORDAR Test Collection.
Proceedings of the Linking Theory and Practice of Digital Libraries, 2024



Veracity Estimation for Entity-Oriented Search with Knowledge Graphs.
Proceedings of the 33rd ACM International Conference on Information and Knowledge Management, 2024

2023
CORE Nanopublications.
Dataset, December, 2023


A Novel Curated Scholarly Graph Connecting Textual and Data Publications.
ACM J. Data Inf. Qual., September, 2023

Building a large gene expression-cancer knowledge base with limited human annotations.
Database J. Biol. Databases Curation, September, 2023

A systematic review of Automatic Term Extraction: What happened in 2022?
Digit. Scholarsh. Humanit., June, 2023

The ExaMode Ontology (full version, v.2).
Dataset, February, 2023

Pairwise Fairness in Ranking as a Dissatisfaction Measure.
Proceedings of the Sixteenth ACM International Conference on Web Search and Data Mining, 2023

Searching for Reliable Facts over a Medical Knowledge Base.
Proceedings of the 46th International ACM SIGIR Conference on Research and Development in Information Retrieval, 2023

An Ontology-Driven Knowledge Extraction Tool for Pathology Record Classification.
Proceedings of the 31st Symposium of Advanced Database Systems, 2023

CoreKB: A Web-based Platform for Searching Reliable Facts over a Medical Knowledge Base.
Proceedings of the 31st Symposium of Advanced Database Systems, 2023

SKET: an Unsupervised Knowledge Extraction Tool to Empower Digital Pathology Applications.
Proceedings of the 19th The Conference on Information and Research science Connecting to Digital and Library science, 2023

SKET X: A Visual Analytics Tool for Explaining Knowledge Extraction Results.
Proceedings of the 13th Italian Information Retrieval Workshop (IIR 2023), 2023

Dissatisfaction Induced by Pairwise Swaps.
Proceedings of the 13th Italian Information Retrieval Workshop (IIR 2023), 2023

A Search Engine for Algorithmic Fairness Datasets.
Proceedings of the 2nd European Workshop on Algorithmic Fairness, 2023

How to Cite a Web Ranking and Make it FAIR.
Proceedings of the Linking Theory and Practice of Digital Libraries: 27th International Conference on Theory and Practice of Digital Libraries, 2023

Tracing Data Footprints: Formal and Informal Data Citations in the Scientific Literature.
Proceedings of the Linking Theory and Practice of Digital Libraries: 27th International Conference on Theory and Practice of Digital Libraries, 2023



2022
A Novel Curated Scholarly Graph Connecting Textual and Data Publications.
Dataset, December, 2022

Algorithmic Fairness Datasets.
Dataset, December, 2022

Algorithmic Fairness Datasets.
Dataset, May, 2022

Algorithmic Fairness Datasets.
Dataset, May, 2022

TBGA: A Large-Scale Gene-Disease Association Dataset for Biomedical Relation Extraction.
Dataset, January, 2022

Unleashing the potential of digital pathology data by training computer-aided diagnosis models without human annotations.
npj Digit. Medicine, 2022

Learning to rank from relevance judgments distributions.
J. Assoc. Inf. Sci. Technol., 2022

Credit distribution in relational scientific databases.
Inf. Syst., 2022

Algorithmic fairness datasets: the story so far.
Data Min. Knowl. Discov., 2022

TBGA: a large-scale Gene-Disease Association dataset for Biomedical Relation Extraction.
BMC Bioinform., 2022

Expanding the Citation Graph for Data Citations.
Proceedings of the 30th Italian Symposium on Advanced Database Systems, 2022

Exploiting Curated Databases to Train Relation Extraction Models for Gene-Disease Associations.
Proceedings of the 30th Italian Symposium on Advanced Database Systems, 2022

Terminology Extraction in Electronic Health Records. The ExaMode Project (poster).
Proceedings of the 1st International Conference on Multilingual Digital Terminology Today, 2022

An Open-Source Annotation Tool for Collaboratively Annotating Biomedical Documents.
Proceedings of the 18th Italian Research Conference on Digital Libraries, 2022

DocTAG: A Customizable Annotation Tool for Ground Truth Creation.
Proceedings of the Advances in Information Retrieval, 2022

Tackling Documentation Debt: A Survey on Algorithmic Fairness Datasets.
Proceedings of the Equity and Access in Algorithms, Mechanisms, and Optimization, 2022


Overview of iDPP@CLEF 2022: The Intelligent Disease Progression Prediction Challenge.
Proceedings of the Working Notes of CLEF 2022 - Conference and Labs of the Evaluation Forum, Bologna, Italy, September 5th - to, 2022

2021
Building Large-Scale Gene-Disease Association Datasets for Biomedical Relation Extraction.
Dataset, July, 2021

Information and Research Science connecting to Digital and Library Science: Report on the 17th Italian Research Conference on Digital Libraries, IRCDL2021.
SIGMOD Rec., 2021

Report on the 2nd international conference on design of experimental search & information retrieval systems (DESIRES 2021).
SIGIR Forum, 2021

Data citation and the citation graph.
Quant. Sci. Stud., 2021

Search, access, and explore life science nanopublications on the Web.
PeerJ Comput. Sci., 2021

MedTAG: a portable and customizable annotation tool for biomedical documents.
BMC Medical Informatics Decis. Mak., 2021

NanoWeb: Search, Access and Explore Life Science Nanopublications on the Web (Discussion Paper).
Proceedings of the 29th Italian Symposium on Advanced Database Systems, 2021

Background Linking: Joining Entity Linking with Learning to Rank Models.
Proceedings of the 17th Italian Research Conference on Digital Libraries, 2021

Data Credit Distribution through Lineage.
Proceedings of the 17th Italian Research Conference on Digital Libraries, 2021

Measuring Gender Stereotype Reinforcement in Information Retrieval Systems.
Proceedings of the 11th Italian Information Retrieval Workshop 2021, 2021

SAFIR: a Semantic-Aware Neural Framework for IR.
Proceedings of the 11th Italian Information Retrieval Workshop 2021, 2021

Neural Feature Selection for Learning to Rank.
Proceedings of the Advances in Information Retrieval, 2021

Preface.
Proceedings of the Second International Conference on Design of Experimental Search & Information REtrieval Systems, 2021

Multi-Scale Task Multiple Instance Learning for the Classification of Digital Pathology Images with Global Annotations.
Proceedings of the MICCAI Workshop on Computational Pathology, 2021

Incentives for Item Duplication Under Fair Ranking Policies.
Proceedings of the Advances in Bias and Fairness in Information Retrieval, 2021

Algorithmic Audit of Italian Car Insurance: Evidence of Unfairness in Access and Pricing.
Proceedings of the AIES '21: AAAI/ACM Conference on AI, 2021

2020
The ExaMode Ontology (full version).
Dataset, October, 2020

The ExaMode Ontology (colon cancer version).
Dataset, June, 2020

Learning Unsupervised Knowledge-Enhanced Representations to Reduce the Semantic Gap in Information Retrieval (Evaluation datasets).
Dataset, June, 2020

Learning Unsupervised Knowledge-Enhanced Representations to Reduce the Semantic Gap in Information Retrieval.
ACM Trans. Inf. Syst., 2020

Data credit distribution: A new method to estimate databases impact.
J. Informetrics, 2020

Focal elements of neural information retrieval models. An outlook through a reproducibility study.
Inf. Process. Manag., 2020

Gender stereotype reinforcement: Measuring the gender bias conveyed by ranking algorithms.
Inf. Process. Manag., 2020

Search Text to Retrieve Graphs: A Scalable RDF Keyword-Based Search System.
IEEE Access, 2020

Data Provenance for Attributes: Attribute Lineage.
Proceedings of the 12th International Workshop on Theory and Practice of Provenance, 2020

A Document-based RDF Keyword Search System: Query-by-Query Analysis.
Proceedings of the 28th Italian Symposium on Advanced Database Systems, 2020

An Information Visualization Tool for the Interactive Component-Based Evaluation of Search Engines.
Proceedings of the Digital Libraries: The Era of Big Data and Data Science, 2020

Nanocitation: Complete and Interoperable Citations of Nanopublications.
Proceedings of the Digital Libraries: The Era of Big Data and Data Science, 2020

Reproducibility of the Neural Vector Space Model via Docker.
Proceedings of the Digital Libraries: The Era of Big Data and Data Science, 2020

Gender Bias in Italian Word Embeddings.
Proceedings of the Seventh Italian Conference on Computational Linguistics, 2020

2019
Digital Libraries: Supporting Open Science.
SIGMOD Rec., 2019

Report on the International Conference on Design of Experimental Search & Information Retrieval Systems (DESIRES 2018).
SIGIR Forum, 2019

An InfoVis Tool for Interactive Component-Based Evaluation.
CoRR, 2019

Supervised Lexicon Extraction for Emotion Classification.
Proceedings of the Companion of The 2019 World Wide Web Conference, 2019

A Scalable Virtual Document-Based Keyword Search System for RDF Datasets.
Proceedings of the 42nd International ACM SIGIR Conference on Research and Development in Information Retrieval, 2019

A Docker-Based Replicability Study of a Neural Information Retrieval Model.
Proceedings of the Open-Source IR Replicability Challenge co-located with 42nd International ACM SIGIR Conference on Research and Development in Information Retrieval, 2019

Medical Retrieval using Structured Information Extracted from Knowledge Bases.
Proceedings of the 27th Italian Symposium on Advanced Database Systems, 2019

Learning to Cite: Transfer Learning for Digital Archives.
Proceedings of the Digital Libraries: Supporting Open Science, 2019

On Synergies Between Information Retrieval and Digital Libraries.
Proceedings of the Digital Libraries: Supporting Open Science, 2019

Feature Selection for Emotion Classification.
Proceedings of the 10th Italian Information Retrieval Workshop, 2019

A Progressive Visual Analytics Tool for Incremental Experimental Evaluation.
Proceedings of the 10th Italian Information Retrieval Workshop, 2019

Virtual Document-based Methods for Keyword Search on RDF Graphs.
Proceedings of the 10th Italian Information Retrieval Workshop, 2019

Probabilistic Word Embeddings in Neural IR: A Promising Model That Does Not Work as Expected (For Now).
Proceedings of the 2019 ACM SIGIR International Conference on Theory of Information Retrieval, 2019

A Framework for Citing Nanopublications.
Proceedings of the Digital Libraries for Open Knowledge, 2019

An Innovative Approach to Data Management and Curation of Experimental Data Generated Through IR Test Collections.
Proceedings of the Information Retrieval Evaluation in a Changing World, 2019

2018
Theory and practice of data citation.
J. Assoc. Inf. Sci. Technol., 2018

Toward an anatomy of IR system component performances.
J. Assoc. Inf. Sci. Technol., 2018

CLAIRE: A combinatorial visual analytics system for information retrieval evaluation.
Inf. Process. Manag., 2018

Data Citation: A New Provenance Challenge.
IEEE Data Eng. Bull., 2018

Data Citation: Giving Credit Where Credit is Due.
Proceedings of the 2018 International Conference on Management of Data, 2018

Evaluation of Conformance Checkers for Long-Term Preservation of Multimedia Documents.
Proceedings of the 18th ACM/IEEE on Joint Conference on Digital Libraries, 2018

Thirty Years of Digital Libraries Research at the University of Padua: The Systems Side.
Proceedings of the Digital Libraries and Multimedia Archives, 2018

Thirty Years of Digital Libraries Research at the University of Padua: The User Side.
Proceedings of the Digital Libraries and Multimedia Archives, 2018

The CLAIRE Visual Analytics System for Analysing IR Evaluation Data.
Proceedings of the 9th Italian Information Retrieval Workshop, 2018

Statistical Stemmers: A Reproducibility Study.
Proceedings of the Advances in Information Retrieval, 2018

A Relation Extraction Approach for Clinical Decision Support.
Proceedings of the CIKM 2018 Workshops co-located with 27th ACM International Conference on Information and Knowledge Management (CIKM 2018), 2018

Digital Libraries: From Digital Resources to Challenges in Scientific Data Sharing and Re-Use.
Proceedings of the A Comprehensive Guide Through the Italian Database Research Over the Last 25 Years., 2018

2017
Semantic representation and enrichment of information retrieval experimental data.
Int. J. Digit. Libr., 2017

Learning to cite framework: How to automatically construct citations for hierarchical data.
J. Assoc. Inf. Sci. Technol., 2017

3.5K runs, 5K topics, 3M assessments and 70M measures: What trends in 10 years of Adhoc-ish CLEF?
Inf. Process. Manag., 2017

Visual Analytics for Information Retrieval Evaluation Campaigns.
Proceedings of the 8th International EuroVis Workshop on Visual Analytics, 2017

A Model for Fine-Grained Data Citation.
Proceedings of the 25th Italian Symposium on Advanced Database Systems, 2017

Data Citation: A Computational Challenge.
Proceedings of the 36th ACM SIGMOD-SIGACT-SIGAI Symposium on Principles of Database Systems, 2017

Automating Data Citation: The eagle-i Experience.
Proceedings of the 2017 ACM/IEEE Joint Conference on Digital Libraries, 2017

The Road Towards Reproducibility in Science: The Case of Data Citation.
Proceedings of the Digital Libraries and Archives, 2017

Component-Based Evaluation Using GLMM.
Proceedings of the 8th Italian Information Retrieval Workshop, 2017

A Software Library for Conducting Large Scale Experiments on Learning to Rank Algorithms.
Proceedings of the 1st International Workshop on LEARning Next gEneration Rankers co-located with the 3rd ACM International Conference on the Theory of Information Retrieval (ICTIR 2017), 2017

2016
"Data Citation is Coming". Introduction to the Special Issue on Data Citation.
Bull. IEEE Tech. Comm. Digit. Libr., 2016

Keyword-Based Search Over Databases: A Roadmap for a Reference Architecture Paired with an Evaluation Framework.
Trans. Comput. Collect. Intell., 2016

Report on ECIR 2016: 38th European Conference on Information Retrieval.
SIGIR Forum, 2016

The twist measure for IR evaluation: Taking user's effort into account.
J. Assoc. Inf. Sci. Technol., 2016

Descendants, ancestors, children and parent: A set-based approach to efficiently address XPath primitives.
Inf. Process. Manag., 2016

Digital library interoperability at high level of abstraction.
Future Gener. Comput. Syst., 2016

A General Linear Mixed Models Approach to Study System Component Effects.
Proceedings of the 39th International ACM SIGIR conference on Research and Development in Information Retrieval, 2016

A Visual Analytics Approach for What-If Analysis of Information Retrieval Systems.
Proceedings of the 39th International ACM SIGIR conference on Research and Development in Information Retrieval, 2016

Fast Access to XML Data: A Set-Based Approach.
Proceedings of the 24th Italian Symposium on Advanced Database Systems, 2016

From Users to Systems: Identifying and Overcoming Barriers to Efficiently Access Archival Data.
Proceedings of the First International Workshop on Accessing Cultural Heritage at Scale co-located with Joint Conference on Digital Libraries 2016 (JCDL 2016), 2016

An Ontology to Make the DELOS Reference Model and the 5S Model Interoperable.
Proceedings of the Digital Libraries and Multimedia Archives, 2016

What-If Analysis: A Visual Analytics Approach to Information Retrieval Evaluation.
Proceedings of the 7th Italian Information Retrieval Workshop, 2016

IR Scientific Data: How to Semantically Represent and Enrich Them.
Proceedings of Third Italian Conference on Computational Linguistics (CLiC-it 2016) & Fifth Evaluation Campaign of Natural Language Processing and Speech Tools for Italian. Final Workshop (EVALITA 2016), 2016

The CLEF Monolingual Grid of Points.
Proceedings of the Experimental IR Meets Multilinguality, Multimodality, and Interaction, 2016

2015
A Methodology for Citing Linked Open Data Subsets.
D Lib Mag., 2015

A Perspective Look at Keyword-based Search Over Relation Data and its Evaluation (extended abstract).
Proceedings of the 23rd Italian Symposium on Advanced Database Systems, 2015

Towards a Semantic Web Enabled Representation of DL Foundational Models: The Quality Domain Example.
Proceedings of the Digital Libraries on the Move, 2015

The PREFORMA Project: Federating Memory Institutions for Better Compliance of Preservation Formats.
Proceedings of the Digital Libraries on the Move, 2015

A Graphical View of Distance Between Rankings: The Point and Area Measures.
Proceedings of the 6th Italian Information Retrieval Workshop, 2015

CLEF 2000-2014: Lessons Learnt from Ad Hoc Retrieval.
Proceedings of the 6th Italian Information Retrieval Workshop, 2015

Rank-Biased Precision Reloaded: Reproducibility and Generalization.
Proceedings of the Advances in Information Retrieval, 2015

Visual Analytics for Information Retrieval Evaluation (VAIRË 2015).
Proceedings of the Advances in Information Retrieval, 2015

Linked Open Data Framework for Serendipity in History of Art Research.
Proceedings of 1st AI*IA Workshop on Intelligent Techniques At LIbraries and Archives co-located with XIV Conference of the Italian Association for Artificial Intelligence, 2015

2014
VIRTUE: A visual tool for information retrieval performance evaluation and failure analysis.
J. Vis. Lang. Comput., 2014

A linked open data approach for geolinguistics applications.
Int. J. Metadata Semant. Ontologies, 2014

Making it Easier to Discover, Re-Use and Understand Search Engine Experimental Evaluation Data.
ERCIM News, 2014

Enriching Digital Cultural Heritage Collections via Annotations: The CULTURA approach.
Proceedings of the 22nd Italian Symposium on Advanced Database Systems, 2014

A Vector Space Model for Syntactic Distances Between Dialects.
Proceedings of the Ninth International Conference on Language Resources and Evaluation, 2014

Measuring Syntactic Distances between Dialects: A Web Application for Annotating Dialectal Data.
Proceedings of the Pushing the Boundaries of the Digital Libraries Field, 2014

Measuring and Analyzing the Scholarly Impact of Experimental Evaluation Initiatives.
Proceedings of the Pushing the Boundaries of the Digital Libraries Field, 2014

A Visual Interactive Environment for Making Sense of Experimental Data.
Proceedings of the Advances in Information Retrieval, 2014

CLEF 15th Birthday: What Can We Learn From Ad Hoc Retrieval?
Proceedings of the Information Access Evaluation. Multilinguality, Multimodality, and Interaction, 2014

Comparing Methodologies: Linked Open Data and Digital Libraries.
Proceedings of the Third AIUCD Annual Conference on Humanities and Their Methods in the Digital Ecosystem, 2014

2013
PROMISE winter school 2013 bridging between information retrieval and databases.
SIGIR Forum, 2013

A curated and evolving linguistic linked dataset.
Semantic Web, 2013

NESTOR: A formal model for digital archives.
Inf. Process. Manag., 2013

Keyword search and evaluation over relational databases: an outlook to the future.
Proceedings of the 7th International Workshop on Ranking in Databases (co-located with VLDB 2013), 2013

A geolinguistic web application based on linked open data.
Proceedings of the 36th International ACM SIGIR conference on research and development in Information Retrieval, 2013

Refactoring Database to Improve Queries Performance.
Proceedings of the 21st Italian Symposium on Advanced Database Systems, 2013

Digital Archives: Extending the 5S Model through NESTOR.
Proceedings of the Bridging Between Cultural Heritage Institutions, 2013

The Evaluation Approach of IPSA@CULTURA.
Proceedings of the Bridging Between Cultural Heritage Institutions, 2013

Cumulated Relative Position: A Metric for Ranking Evaluation.
Proceedings of the 4th Italian Information Retrieval Workshop, 2013

Formal Models for Digital Archives: NESTOR and the 5S.
Proceedings of the Research and Advanced Technology for Digital Libraries, 2013

An Open Source System Architecture for Digital Geolinguistic Linked Open Data.
Proceedings of the Research and Advanced Technology for Digital Libraries, 2013

Improving Ranking Evaluation Employing Visual Analytics.
Proceedings of the Information Access Evaluation. Multilinguality, Multimodality, and Visualization, 2013

2012
PROMISE retreat report prospects and opportunities for information access evaluation.
SIGIR Forum, 2012

Structural and Content Queries on the Nested Sets Model.
Proceedings of the Twentieth Italian Symposium on Advanced Database Systems, 2012

Modeling Archives by Means of OAI-ORE.
Proceedings of the Digital Libraries and Archives - 8th Italian Research Conference, 2012

Empowering Archives through Annotations.
Proceedings of the Digital Libraries and Archives - 8th Italian Research Conference, 2012

Visual interactive failure analysis: supporting users in information retrieval evaluation.
Proceedings of the Information Interaction in Context: 2012, 2012

Information retrieval failure analysis: Visual analytics as a support for interactive "what-if" investigation.
Proceedings of the 7th IEEE Conference on Visual Analytics Science and Technology, 2012

A System for Exposing Linguistic Linked Open Data.
Proceedings of the Theory and Practice of Digital Libraries, 2012

DIRECTions: Design and Specification of an IR Evaluation Infrastructure.
Proceedings of the Information Access Evaluation. Multilinguality, Multimodality, and Visual Analytics, 2012

2011
Handling Hierarchically Structured Resources Addressing Interoperability Issues in Digital Libraries.
Proceedings of the Learning Structure and Schemas from Documents, 2011

A set-based approach to deal with hierarchical structures.
PhD thesis, 2011

The NESTOR Model: Properties and Applications in the Context of Digital Archives.
Proceedings of the Sistemi Evoluti per Basi di Dati, 2011

PROMISE - Participative Research labOratory for Multimedia and Multilingual Information Systems Evaluation.
Proceedings of the Digital Libraries and Archives - 7th Italian Research Conference, 2011

SIAR: A User-Centric Digital Archive System.
Proceedings of the Digital Libraries and Archives - 7th Italian Research Conference, 2011

2010
A Rule-Based Citation System for Structured and Evolving Datasets.
IEEE Data Eng. Bull., 2010

The NESTOR Framework: Manage, Access and Exchange Hierarchical DataStructures.
Proceedings of the Eighteenth Italian Symposium on Advanced Database Systems, 2010

FAST and NESTOR: How to Exploit Annotation Hierarchies.
Proceedings of the Digital Libraries - 6th Italian Research Conference, 2010

2009
Access and Exchange of Hierarchically Structured Resources on the Web with the NESTOR Framework.
Proceedings of the 2009 IEEE/WIC/ACM International Conference on Web Intelligence, 2009

Design and Development of the Data Model of a Distributed DLS Architecture for Archive Metadata.
Proceedings of the Post-proceedings of the Fifth Italian Research Conference on Digital Libraries, 2009

The NESTOR Framework: How to Handle Hierarchical Data Structures.
Proceedings of the Research and Advanced Technology for Digital Libraries, 2009

2008
A Distributed Digital Library System Architecture for Archive Metadata.
Proceedings of the Post-proceedings of the Forth Italian Research Conference on Digital Library Systems, 2008

A Methodology for Sharing Archival Descriptive Metadata in a Distributed Environment.
Proceedings of the Research and Advanced Technology for Digital Libraries, 2008

2007
An Architecture for Sharing Metadata Among Geographically Distributed Archives.
Proceedings of the Digital Libraries: Research and Development, 2007


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