Gernot Plank

Orcid: 0000-0002-7380-6908

According to our database1, Gernot Plank authored at least 115 papers between 2004 and 2024.

Collaborative distances:
  • Dijkstra number2 of four.
  • Erdős number3 of four.

Timeline

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Bibliography

2024
Hybrid Neural State-Space Modeling for Supervised and Unsupervised Electrocardiographic Imaging.
IEEE Trans. Medical Imaging, August, 2024

Multi-Source and Multi-Sequence Myocardial Pathology Segmentation Using a Cascading Refinement CNN.
CoRR, 2024

Quantifying variabilities in cardiac digital twin models of the electrocardiogram.
CoRR, 2024

ForCEPSS - A framework for cardiac electrophysiology simulations standardization.
Comput. Methods Programs Biomed., 2024

pyCEPS: A cross-platform electroanatomic mapping data to computational model conversion platform for the calibration of digital twin models of cardiac electrophysiology.
Comput. Methods Programs Biomed., 2024

BOATMAP: Bayesian Optimization Active Targeting for Monomorphic Arrhythmia Pace-mapping.
Comput. Biol. Medicine, 2024

CaRe-CNN: Cascading Refinement CNN for Myocardial Infarct Segmentation with Microvascular Obstructions.
Proceedings of the 19th International Joint Conference on Computer Vision, 2024

2023
Mechanoelectric effects in healthy cardiac function and under Left Bundle Branch Block pathology.
Comput. Biol. Medicine, April, 2023

Assessing the arrhythmogenic risk of engineered heart tissue patches through <i>in silico</i> application on infarcted ventricle models.
Comput. Biol. Medicine, March, 2023

Comparison of Propagation Models and Forward Calculation Methods on Cellular, Tissue and Organ Scale Atrial Electrophysiology.
IEEE Trans. Biomed. Eng., February, 2023

Cell to whole organ global sensitivity analysis on a four-chamber heart electromechanics model using Gaussian processes emulators.
PLoS Comput. Biol., 2023

Physics-informed Neural Network Estimation of Material Properties in Soft Tissue Nonlinear Biomechanical Models.
CoRR, 2023

Effect of Varying Pericardial Boundary Conditions on Whole Heart Function: A Computational Study.
Proceedings of the Functional Imaging and Modeling of the Heart, 2023

Uncertainty Quantification of Fiber Orientation and Epicardial Activation.
Proceedings of the Computing in Cardiology, 2023

Towards the Development of Virtual Heart Technology for Creating Digital Twins of Cardiac Electrophysiology.
Proceedings of the Computing in Cardiology, 2023

Capturing the Influence of Conduction Velocity on Epicardial Activation Patterns Using Uncertainty Quantification.
Proceedings of the Computing in Cardiology, 2023

Parameter Estimation for Personalized Cardiac Models via Active Learning.
Proceedings of the Computing in Cardiology, 2023

2022
Global Sensitivity Analysis of Four Chamber Heart Hemodynamics Using Surrogate Models.
IEEE Trans. Biomed. Eng., 2022

Correction: Linking statistical shape models and simulated function in the healthy adult human heart.
PLoS Comput. Biol., 2022

Modelling the interaction between stem cells derived cardiomyocytes patches and host myocardium to aid non-arrhythmic engineered heart tissue design.
PLoS Comput. Biol., 2022

An automated near-real time computational method for induction and treatment of scar-related ventricular tachycardias.
Medical Image Anal., 2022

On the incorporation of obstacles in a fluid flow problem using a Navier-Stokes-Brinkman penalization approach.
J. Comput. Sci., 2022

Robust and efficient fixed-point algorithm for the inverse elastostatic problem to identify myocardial passive material parameters and the unloaded reference configuration.
J. Comput. Phys., 2022

Physics-informed neural networks to learn cardiac fiber orientation from multiple electroanatomical maps.
Eng. Comput., 2022

MedalCare-XL: 16, 900 healthy and pathological 12 lead ECGs obtained through electrophysiological simulations.
CoRR, 2022

Smoothness and continuity of cost functionals for ECG mismatch computation.
CoRR, 2022

Impact of anatomical reverse remodelling in the design of optimal quadripolar pacing leads: A computational study.
Comput. Biol. Medicine, 2022

Determining anatomical and electrophysiological detail requirements for computational ventricular models of porcine myocardial infarction.
Comput. Biol. Medicine, 2022

A Method for Incorporating Changes in Extracellular Volume and Myocyte Size Into the Cardiac Bidomain Equations.
Proceedings of the Computing in Cardiology, 2022

Exploring Role of Accessory Pathway Location in Wolff-Parkinson-White Syndrome in a Model of Whole Heart Electrophysiology.
Proceedings of the Computing in Cardiology, 2022


2021
How Electrode Position Affects Selective His Bundle Capture: A Modelling Study.
IEEE Trans. Biomed. Eng., 2021

Estimation and Validation of Cardiac Conduction Velocity and Wavefront Reconstruction Using Epicardial and Volumetric Data.
IEEE Trans. Biomed. Eng., 2021

Linking statistical shape models and simulated function in the healthy adult human heart.
PLoS Comput. Biol., 2021

A Framework for the generation of digital twins of cardiac electrophysiology from clinical 12-leads ECGs.
Medical Image Anal., 2021

A coupling strategy for a 3D-1D model of the cardiovascular system to study the effects of pulse wave propagation on cardiac function.
CoRR, 2021

An accurate, robust, and efficient finite element framework for anisotropic, nearly and fully incompressible elasticity.
CoRR, 2021

GEASI: Geodesic-based Earliest Activation Sites Identification in cardiac models.
CoRR, 2021

The <i>openCARP</i> simulation environment for cardiac electrophysiology.
Comput. Methods Programs Biomed., 2021

Non-invasive simulated electrical and measured mechanical indices predict response to cardiac resynchronization therapy.
Comput. Biol. Medicine, 2021

Assessing the ability of substrate mapping techniques to guide ventricular tachycardia ablation using computational modelling.
Comput. Biol. Medicine, 2021

The Effect of Ventricular Myofibre Orientation on Atrial Dynamics.
Proceedings of the Functional Imaging and Modeling of the Heart, 2021

Learning Atrial Fiber Orientations and Conductivity Tensors from Intracardiac Maps Using Physics-Informed Neural Networks.
Proceedings of the Functional Imaging and Modeling of the Heart, 2021

The Role of Myocardial Fiber Direction in Epicardial Activation Patterns via Uncertainty Quantification.
Proceedings of the Computing in Cardiology, CinC 2021, Brno, 2021

Influence of Electrode Placement on the Morphology of In Silico 12 Lead Electrocardiograms.
Proceedings of the Computing in Cardiology, CinC 2021, Brno, 2021

2020
3D Electrophysiological Modeling of Interstitial Fibrosis Networks and Their Role in Ventricular Arrhythmias in Non-Ischemic Cardiomyopathy.
IEEE Trans. Biomed. Eng., 2020

Automating image-based mesh generation and manipulation tasks in cardiac modeling workflows using Meshtool.
SoftwareX, 2020

An inverse Eikonal method for identifying ventricular activation sequences from epicardial activation maps.
J. Comput. Phys., 2020

In-silico pace-mapping using a detailed whole torso model and implanted electronic device electrograms for more efficient ablation planning.
Comput. Biol. Medicine, 2020

A computational investigation into rate-dependant vectorcardiogram changes due to specific fibrosis patterns in non-ischæmic dilated cardiomyopathy.
Comput. Biol. Medicine, 2020

PIEMAP: Personalized Inverse Eikonal Model from Cardiac Electro-Anatomical Maps.
Proceedings of the Statistical Atlases and Computational Models of the Heart. M&Ms and EMIDEC Challenges, 2020

His Bundle Pacing but not Left Bundle Pacing Corrects Septal Flash in Left Bundle Branch Block Patients.
Proceedings of the Computing in Cardiology, 2020

openCARP: An Open Sustainable Framework for In-Silico Cardiac Electrophysiology Research.
Proceedings of the Computing in Cardiology, 2020

Effect of Myocardial Fiber Direction on Epicardial Activation Patterns.
Proceedings of the Computing in Cardiology, 2020

Constructing Virtual Patient Cohorts for Simulating Atrial Fibrillation Ablation.
Proceedings of the Computing in Cardiology, 2020

Quantifying the Spatiotemporal Influence of Acute Myocardial Ischemia on Volumetric Conduction Speeds.
Proceedings of the Computing in Cardiology, 2020

2019
Scar shape analysis and simulated electrical instabilities in a non-ischemic dilated cardiomyopathy patient cohort.
PLoS Comput. Biol., 2019

A rule-based method for predicting the electrical activation of the heart with cardiac resynchronization therapy from non-invasive clinical data.
Medical Image Anal., 2019

Generation of a cohort of whole-torso cardiac models for assessing the utility of a novel computed shock vector efficiency metric for ICD optimisation.
Comput. Biol. Medicine, 2019

Validation of Intramural Wavefront Reconstruction and Estimation of 3D Conduction Velocity.
Proceedings of the 46th Computing in Cardiology, 2019

2018
Personalized computational modeling of left atrial geometry and transmural myofiber architecture.
Medical Image Anal., 2018

A work flow to build and validate patient specific left atrium electrophysiology models from catheter measurements.
Medical Image Anal., 2018

Universal ventricular coordinates: A generic framework for describing position within the heart and transferring data.
Medical Image Anal., 2018

Predicting Activation Patterns in Cardiac Resynchronization Therapy Patients.
Proceedings of the Computing in Cardiology, 2018

Automatic Generation of Bi-Ventricular Models of Cardiac Electrophysiology for Patient Specific Personalization Using Non-Invasive Recordings.
Proceedings of the Computing in Cardiology, 2018

Personalized Modelling Pipeline for Cardiac Electrophysiology Simulations of Cardiac Resynchronization Therapy in Infarct patients.
Proceedings of the Computing in Cardiology, 2018

A Multiscale Computational Model of Calcium-Mediated Ectopy in the Human Postinfarction Heart.
Proceedings of the Computing in Cardiology, 2018

The Effects of Non-ischemic Fibrosis Texture and Density on Mechanisms of Reentry.
Proceedings of the Computing in Cardiology, 2018

2017
Efficient computation of electrograms and ECGs in human whole heart simulations using a reaction-eikonal model.
J. Comput. Phys., 2017

Model-based Estimation of Internal Heart Power in Aortic Valve Disease Patients.
Proceedings of the Computing in Cardiology, 2017

Patient-specific Parameterization of Left-ventricular Model of Cardiac Electrophysiology using Electrocardiographic Recordings.
Proceedings of the Computing in Cardiology, 2017

A Predictive Personalised Model for the Left Atrium.
Proceedings of the Computing in Cardiology, 2017

2016
Anatomically accurate high resolution modeling of human whole heart electromechanics: A strongly scalable algebraic multigrid solver method for nonlinear deformation.
J. Comput. Phys., 2016

Personalised Biophysical Model to Optimise Left Ventricle Pacing Location for Cardiac Resynchronisation Therapy Over Time.
Proceedings of the Computing in Cardiology, CinC 2016, Vancouver, 2016

Personalized Modeling Pipeline for Left Atrial Electromechanics.
Proceedings of the Computing in Cardiology, CinC 2016, Vancouver, 2016

Modulation of Effective Refractory Period at the Infarct Border-Zone Provides a Mechanism for Focal Arrhythmogenesis.
Proceedings of the Computing in Cardiology, CinC 2016, Vancouver, 2016

2015
Local Gradients in Electrotonic Loading Modulate the Local Effective Refractory Period: Implications for Arrhythmogenesis in the Infarct Border Zone.
IEEE Trans. Biomed. Eng., 2015

2014
An Efficient Finite Element Approach for Modeling Fibrotic Clefts in the Heart.
IEEE Trans. Biomed. Eng., 2014

2013
Electroanatomical Characterization of Atrial Microfibrosis in a Histologically Detailed Computer Model.
IEEE Trans. Biomed. Eng., 2013

Stepping into Fully GPU Accelerated Biomedical Applications.
Proceedings of the Large-Scale Scientific Computing - 9th International Conference, 2013

Comparison of Changes in Effective Electrical Size with Activation Rate between Small Mammalian and Human Ventricular Models.
Proceedings of the Functional Imaging and Modeling of the Heart, 2013

Parametrization strategies for matching activation sequences in models of ventricular electrophysiology.
Proceedings of the 35th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 2013

Automatic Parametrization Strategy for Cardiac Electrophysiology Simulations.
Proceedings of the Computing in Cardiology, 2013

2012
Accelerating Cardiac Bidomain Simulations Using Graphics Processing Units.
IEEE Trans. Biomed. Eng., 2012

Influence of ischemic core muscle fibers on surface depolarization potentials in superfused cardiac tissue preparations: a simulation study.
Medical Biol. Eng. Comput., 2012

Subject specific, image based analysis and modeling in patients with atrial fibrillation from MRI.
Proceedings of the 9th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2012

Integration of different cardiac electrophysiological models into a single simulation pipeline.
Proceedings of the 9th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2012

2011
A Macro Finite-Element Formulation for Cardiac Electrophysiology Simulations Using Hybrid Unstructured Grids.
IEEE Trans. Biomed. Eng., 2011

Estimation of Local Orientations in Fibrous Structures With Applications to the Purkinje System.
IEEE Trans. Biomed. Eng., 2011

Bidomain ECG Simulations Using an Augmented Monodomain Model for the Cardiac Source.
IEEE Trans. Biomed. Eng., 2011

Representing Cardiac Bidomain Bath-Loading Effects by an Augmented Monodomain Approach: Application to Complex Ventricular Models.
IEEE Trans. Biomed. Eng., 2011

Accelerating cardiac excitation spread simulations using graphics processing units.
Concurr. Comput. Pract. Exp., 2011

Numerical solution for optimal control of the reaction-diffusion equations in cardiac electrophysiology.
Comput. Optim. Appl., 2011

Elastic Registration of Edge Sets by Means of Diffuse Surfaces - With an Application to Embedding Purkinje Fiber Networks.
Proceedings of the VISAPP 2011, 2011

Modeling Atrial Fiber Orientation in Patient-Specific Geometries: A Semi-automatic Rule-Based Approach.
Proceedings of the Functional Imaging and Modeling of the Heart, 2011

A finite element approach for modeling micro-structural discontinuities in the heart.
Proceedings of the 33rd Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 2011

2010
Modeling the Role of the Coronary Vasculature During External Field Stimulation.
IEEE Trans. Biomed. Eng., 2010

Algebraic Multigrid Solver on Clusters of CPUs and GPUs.
Proceedings of the Applied Parallel and Scientific Computing, 2010

Generic Conduction Parameters for Predicting Activation Waves in Customised Cardiac Electrophysiology Models.
Proceedings of the Statistical Atlases and Computational Models of the Heart, 2010

2009
Solving the Coupled System Improves Computational Efficiency of the Bidomain Equations.
IEEE Trans. Biomed. Eng., 2009

Automatically Generated, Anatomically Accurate Meshes for Cardiac Electrophysiology Problems.
IEEE Trans. Biomed. Eng., 2009

Simulations of the Electrical Activity in the Heart with Graphic Processing Units.
Proceedings of the Parallel Processing and Applied Mathematics, 2009

Estimation of Multimodal Orientation Distribution Functions from Cardiac MRI for Tracking Purkinje Fibers Through Branchings.
Proceedings of the 2009 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, Boston, MA, USA, June 28, 2009

The Role of Blood Vessels in Rabbit Propagation Dynamics and Cardiac Arrhythmias.
Proceedings of the Functional Imaging and Modeling of the Heart, 2009

Comparison of Rule-Based and DTMRI-Derived Fibre Architecture in a Whole Rat Ventricular Computational Model.
Proceedings of the Functional Imaging and Modeling of the Heart, 2009

A Parallel Algebraic Multigrid Solver on Graphics Processing Units.
Proceedings of the High Performance Computing and Applications, 2009

2008
Modeling the influence of the VV delay for CRT on the electrical activation patterns in absence of conduction through the AV node.
Proceedings of the Medical Imaging 2008: Visualization, 2008

Nonlinear filtering for extracting orientation and tracing tubular structures in 2-D medical images.
Proceedings of the 2008 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2008

High Performance Computer Simulations of Cardiac Electrical Function Based on High Resolution MRI Datasets.
Proceedings of the Computational Science, 2008

2007
Algebraic Multigrid Preconditioner for the Cardiac Bidomain Model.
IEEE Trans. Biomed. Eng., 2007

Reduced-Order Preconditioning for Bidomain Simulations.
IEEE Trans. Biomed. Eng., 2007

A Hilbert-order multiplication scheme for unstructured sparse matrices.
Int. J. Parallel Emergent Distributed Syst., 2007

An Iterative Method for Registration of High-Resolution Cardiac Histoanatomical and Mri Images.
Proceedings of the 2007 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2007

2006
Accelerating Large Cardiac Bidomain Simulations by Arnoldi Preconditioning.
Proceedings of the 28th International Conference of the IEEE Engineering in Medicine and Biology Society, 2006

2004
Parallel multigrid preconditioner for the cardiac bidomain model.
IEEE Trans. Biomed. Eng., 2004


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