Ge Tan

According to our database, Ge Tan authored at least 8 papers between 2010 and 2020.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2020

JASPAR 2020: update of the open-access database of transcription factor binding profiles.

Oriol Fornes, Jaime Abraham Castro-Mondragón, Aziz Khan, Robin van der Lee, Xi Zhang, Phillip Andrew Richmond, Bhavi P. Modi, Solenne Correard, Marius Gheorghe, Damir Baranasic, Walter Santana-Garcia, Ge Tan, Jeanne Chèneby, Benoît Ballester, François Parcy, Albin Sandelin, Boris Lenhard, Wyeth W. Wasserman, Anthony Mathelier

Nucleic Acids Res., 2020

2019

CNEr: A toolkit for exploring extreme noncoding conservation.

Ge Tan, Dimitris Polychronopoulos, Boris Lenhard

PLoS Comput. Biol., 2019

2018

JASPAR 2018: update of the open-access database of transcription factor binding profiles and its web framework.

Aziz Khan, Oriol Fornes, Arnaud Stigliani, Marius Gheorghe, Jaime Abraham Castro-Mondragón, Robin van der Lee, Adrien Bessy, Jeanne Chèneby, Shubhada R. Kulkarni, Ge Tan, Damir Baranasic, David J. Arenillas, Albin Sandelin, Klaas Vandepoele, Boris Lenhard, Benoît Ballester, Wyeth W. Wasserman, François Parcy, Anthony Mathelier

Nucleic Acids Res., 2018

2016

JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles.

Anthony Mathelier, Oriol Fornes, David J. Arenillas, Chih-Yu Chen, Grégoire Denay, Jessica J. Y. Lee, Wenqiang Shi, Casper Shyr, Ge Tan, Rebecca Worsley-Hunt, Allen W. Zhang, François Parcy, Boris Lenhard, Albin Sandelin, Wyeth W. Wasserman

Nucleic Acids Res., 2016

TFBSTools: an R/bioconductor package for transcription factor binding site analysis.

Ge Tan, Boris Lenhard

Bioinform., 2016

2014

JASPAR 2014: an extensively expanded and updated open-access database of transcription factor binding profiles.

Anthony Mathelier, Xiaobei Zhao, Allen W. Zhang, François Parcy, Rebecca Worsley-Hunt, David J. Arenillas, Sorana Buchman, Chih-Yu Chen, Alice Yi Chou, Hans Ienasescu, Jonathan S. Lim, Casper Shyr, Ge Tan, Michelle Zhou, Boris Lenhard, Albin Sandelin, Wyeth W. Wasserman

Nucleic Acids Res., 2014

2013

Blind spots of quantitative RNA-seq: the limits for assessing abundance, differential expression, and isoform switching.

Hubert Rehrauer, Lennart Opitz, Ge Tan, Lina Sieverling, Ralph Schlapbach

BMC Bioinform., 2013

2010

Computational inference and analysis of genetic regulatory networks via a supervised combinatorial-optimization pattern.

Binhua Tang, Xuechen Wu, Ge Tan, Su-Shing Chen, Qing Jing, Bairong Shen

BMC Syst. Biol., 2010