Gabriel Renaud

According to our database, Gabriel Renaud authored at least 10 papers between 2009 and 2023.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2023

Benchmarking software tools for trimming adapters and merging next-generation sequencing data for ancient DNA.

Annette Lien, Leonardo Pestana Legori, Louis Kraft, Peter Wad Sackett, Gabriel Renaud

Frontiers Bioinform., May, 2023

HaploCart: Human mtDNA haplogroup classification using a pangenomic reference graph.

Joshua Daniel Rubin, Nicola Alexandra Vogel, Shyam Gopalakrishnan, Peter Wad Sackett, Gabriel Renaud

PLoS Comput. Biol., 2023

2020

A likelihood method for estimating present-day human contamination in ancient male samples using low-depth X-chromosome data.

José Víctor Moreno-Mayar, Thorfinn Sand Korneliussen, Jyoti Dalal, Gabriel Renaud, Anders Albrechtsen, Rasmus Nielsen, Anna-Sapfo Malaspinas

Bioinform., 2020

2018

glactools: a command-line toolset for the management of genotype likelihoods and allele counts.

Gabriel Renaud

Bioinform., 2018

2017

gargammel: a sequence simulator for ancient DNA.

Gabriel Renaud, Kristian Hanghøj, Eske Willerslev, Ludovic Orlando

Bioinform., 2017

2015

deML: robust demultiplexing of Illumina sequences using a likelihood-based approach.

Gabriel Renaud, Udo Stenzel, Tomislav Maricic, Victor Wiebe, Janet Kelso

Bioinform., 2015

2014

trieFinder: an efficient program for annotating digital gene expression (DGE) tags.

Gabriel Renaud, Matthew C. LaFave, Jin Liang, Tyra G. Wolfsberg, Shawn M. Burgess

BMC Bioinform., 2014

2013

freeIbis: an efficient basecaller with calibrated quality scores for Illumina sequencers.

Gabriel Renaud, Martin Kircher, Udo Stenzel, Janet Kelso

Bioinform., 2013

2012

Identical sequence patterns in the ends of exons and introns of human protein-coding genes.

Raphael Tavares, Gabriel Renaud, Paulo Sergio Lopes Oliveira, Carlos G. Ferreira, Emmanuel Dias-Neto, Fabio Passetti

Comput. Biol. Chem., 2012

2009

Development and evaluation of new mask protocols for gene expression profiling in humans and chimpanzees.

Donna M. Toleno, Gabriel Renaud, Tyra G. Wolfsberg, Munirul Islam, Derek E. Wildman, Kimberly D. Siegmund, Joseph G. Hacia

BMC Bioinform., 2009