Funda Meric-Bernstam

According to our database, Funda Meric-Bernstam authored at least 21 papers between 2004 and 2020.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2020

Recommendations for patient similarity classes: results of the AMIA 2019 workshop on defining patient similarity.

Nathan D. Seligson, Jeremy L. Warner, William S. Dalton, David Martin, Robert S. Miller, Debra Patt, Kenneth L. Kehl, Matvey B. Palchuk, Gil Alterovitz, Laura K. Wiley, Ming Huang, Feichen Shen, Yanshan Wang, Khoa A. Nguyen, Anthony F. Wong, Funda Meric-Bernstam, Elmer V. Bernstam, James L. Chen

J. Am. Medical Informatics Assoc., 2020

Rate of change in investigational treatment options: An analysis of reports from a large precision oncology decision support effort.

Alejandro Araya, Jia Zeng, Amber M. Johnson, Md Abu Shufean, Jordi Rodon, Funda Meric-Bernstam, Elmer V. Bernstam

Int. J. Medical Informatics, 2020

Learning Patient Representations from Electronic Health Records across Diverse Data Types.

Timothy A. Miller, Dmitriy Dligach, Fei Wang, Yuqi Si, Funda Meric-Bernstam

Proceedings of the AMIA 2020, 2020

2019

Rapamycin-mTOR+BRAF=? Using relational similarity to find therapeutically relevant drug-gene relationships in unstructured text.

Safa Fathiamini, Amber M. Johnson, Jia Zeng, Vijaykumar Holla, Nora S. Sanchez, Funda Meric-Bernstam, Elmer V. Bernstam, Trevor Cohen

J. Biomed. Informatics, 2019

Overview of the TREC 2019 Precision Medicine Track.

Kirk Roberts, Dina Demner-Fushman, Ellen M. Voorhees, William R. Hersh, Steven Bedrick, Alexander J. Lazar, Shubham Pant, Funda Meric-Bernstam

Proceedings of the Twenty-Eighth Text REtrieval Conference, 2019

Decision Support for Genomically-Informed Cancer Therapy.

Funda Meric-Bernstam, Matthew J. Rioth, Assaf Halevy, Pete Stetson

Proceedings of the AMIA 2019, 2019

2016

Automated identification of molecular effects of drugs (AIMED).

Safa Fathiamini, Amber M. Johnson, Jia Zeng, Alejandro Araya, Vijaykumar Holla, Ann M. Bailey, Beate Litzenburger, Nora S. Sanchez, Yekaterina Khotskaya, Hua Xu, Funda Meric-Bernstam, Elmer V. Bernstam, Trevor Cohen

J. Am. Medical Informatics Assoc., 2016

Extracting genetic alteration information for personalized cancer therapy from ClinicalTrials.gov.

Jun Xu, Hee-Jin Lee, Jia Zeng, Yonghui Wu, Yaoyun Zhang, Liang-Chin Huang, Amber M. Johnson, Vijaykumar Holla, Ann M. Bailey, Trevor Cohen, Funda Meric-Bernstam, Elmer V. Bernstam, Hua Xu

J. Am. Medical Informatics Assoc., 2016

Patient knowledge and information-seeking about personalized cancer therapy.

Deevakar Rogith, Rafeek A. Yusuf, Shelley R. Hovick, Bryan M. Fellman, Susan K. Peterson, Allison M. Burton-Chase, Yisheng Li, Elmer V. Bernstam, Funda Meric-Bernstam

Int. J. Medical Informatics, 2016

2015

Using Ontology Fingerprints to disambiguate gene name entities in the biomedical literature.

Guocai Chen, Jieyi Zhao, Trevor Cohen, Cui Tao, Jingchun Sun, Hua Xu, Elmer V. Bernstam, Andrew Lawson, Jia Zeng, Amber M. Johnson, Vijaykumar Holla, Ann M. Bailey, Humberto Lara-Guerra, Beate Litzenburger, Funda Meric-Bernstam, W. Jim Zheng

Database J. Biol. Databases Curation, 2015

2014

Bias from removing read duplication in ultra-deep sequencing experiments.

Wanding Zhou, Tenghui Chen, Hao Zhao, Agda Karina Eterovic, Funda Meric-Bernstam, Gordon B. Mills, Ken Chen

Bioinform., 2014

Using Ontology Fingerprints to Disambiguate Gene Name Entities in the Biomedical Literature.

Guocai Chen, Jieyi Zhao, Trevor Cohen, Cui Tao, Jingchun Sun, Hua Xu, Elmer V. Bernstam, Jia Zeng, Amber M. Johnson, Vijaykumar Holla, Ann Balley, Funda Meric-Bernstam, W. Jim Zheng

Proceedings of the 5th International Conference on Biomedical Ontology, 2014

Exploring the Use of SemRep Predications to Help Identify Secondary Drug Targets for Personalized Cancer Therapy.

Safa Fathiamini, Amber M. Johnson, Vijaykumar Holla, Ann M. Bailey, Jia Zeng, Lauren Brusco, Funda Meric-Bernstam, Elmer V. Bernstam, Trevor Cohen

Proceedings of the AMIA 2014, 2014

2013

Informatics Infrastructure for Routine Personalized Medicine.

Elmer V. Bernstam, Ken Chen, Hua Xu, Funda Meric-Bernstam

Proceedings of the AMIA 2013, 2013

2012

PurityEst: estimating purity of human tumor samples using next-generation sequencing data.

Xiaoping Su, Li Zhang, Jianping Zhang, Funda Meric-Bernstam, John N. Weinstein

Bioinform., 2012

2007

Currency of Online Breast Cancer Information.

Funda Meric-Bernstam, Muhammad F. Walji, Smitha Sagaram, Deepak Sagaram, Elmer V. Bernstam

Proceedings of the MEDINFO 2007 - Proceedings of the 12th World Congress on Health (Medical) Informatics, 2007

2005

Searching for cancer-related information online: Unintended retrieval of complementary and alternative medicine information.

Muhammad F. Walji, Smitha Sagaram, Funda Meric-Bernstam, Craig W. Johnson, Elmer V. Bernstam

Int. J. Medical Informatics, 2005

Instruments to assess the quality of health information on the World Wide Web: what can our patients actually use?

Elmer V. Bernstam, Dawn M. Shelton, Muhammad F. Walji, Funda Meric-Bernstam

Int. J. Medical Informatics, 2005

Usability of quality measures for online health information: Can commonly used technical quality criteria be reliably assessed?

Elmer V. Bernstam, Smitha Sagaram, Muhammad F. Walji, Craig W. Johnson, Funda Meric-Bernstam

Int. J. Medical Informatics, 2005

2004

Cancer-related Complementary and Alternative Medicine Online: Factors Affecting Information Retrieval.

Muhammad F. Walji, Smitha Sagaram, Funda Meric-Bernstam, Craig W. Johnson, Elmer V. Bernstam

Proceedings of the MEDINFO 2004, 2004

Inter-Observer Agreement for Quality Measures Applied to Online Health Information.

Smitha Sagaram, Muhammad F. Walji, Funda Meric-Bernstam, Craig W. Johnson, Elmer V. Bernstam

Proceedings of the MEDINFO 2004, 2004