Fuchu He

According to our database, Fuchu He authored at least 22 papers between 2003 and 2024.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2024

Introducing π-HelixNovo for practical large-scale de novo peptide sequencing.

Tingpeng Yang, Tianze Ling, Boyan Sun, Zhendong Liang, Fan Xu, Xiansong Huang, Linhai Xie, Yonghong He, Leyuan Li, Fuchu He, Yu Wang, Cheng Chang

Briefings Bioinform., January, 2024

2022

A Yeast BiFC-seq Method for Genome-wide Interactome Mapping.

Limin Shang, Yuehui Zhang, Yuchen Liu, Chaozhi Jin, Yanzhi Yuan, Chunyan Tian, Ming Ni, Xiaochen Bo, Li Zhang, Dong Li, Fuchu He, Jian Wang

Genom. Proteom. Bioinform., August, 2022

Exploration of Target Spaces in the Human Genome for Protein and Peptide Drugs.

Zhongyang Liu, Honglei Li, Zhaoyu Jin, Yang Li, Feifei Guo, Yangzhige He, Xinyue Liu, Yaning Qi, Liying Yuan, Fuchu He, Dong Li

Genom. Proteom. Bioinform., August, 2022

UbiBrowser 2.0: a comprehensive resource for proteome-wide known and predicted ubiquitin ligase/deubiquitinase-substrate interactions in eukaryotic species.

Xun Wang, Yang Li, Mengqi He, Xiangren Kong, Peng Jiang, Xi Liu, Lihong Diao, Xinlei Zhang, Honglei Li, Xinping Ling, Simin Xia, Zhongyang Liu, Yuan Liu, Chun-Ping Cui, Yan Wang, Liujun Tang, Lingqiang Zhang, Fuchu He, Dong Li

Nucleic Acids Res., 2022

CTR-DB, an omnibus for patient-derived gene expression signatures correlated with cancer drug response.

Zhongyang Liu, Jiale Liu, Xinyue Liu, Xun Wang, Qiaosheng Xie, Xinlei Zhang, Xiangya Kong, Mengqi He, Yuting Yang, Xinru Deng, Lele Yang, Yaning Qi, Jiajun Li, Yuan Liu, Liying Yuan, Lihong Diao, Fuchu He, Dong Li

Nucleic Acids Res., 2022

iProX in 2021: connecting proteomics data sharing with big data.

Tao Chen, Jie Ma, Yi Liu, Zhiguang Chen, Nong Xiao, Yutong Lu, Yinjin Fu, Chunyuan Yang, Mansheng Li, Songfeng Wu, Xue Wang, Dongsheng Li, Fuchu He, Henning Hermjakob, Yunping Zhu

Nucleic Acids Res., 2022

2019

iProX: an integrated proteome resource.

Jie Ma, Tao Chen, Songfeng Wu, Chunyuan Yang, Mingze Bai, Kunxian Shu, Kenli Li, Guoqing Zhang, Zhong Jin, Fuchu He, Henning Hermjakob, Yunping Zhu

Nucleic Acids Res., 2019

KeggExp: a web server for visual integration of KEGG pathways and expression profile data.

Xian Liu, Mingfei Han, Chen Zhao, Cheng Chang, Yunping Zhu, Changhui Ge, Ronghua Yin, Yiqun Zhan, Changyan Li, Miao Yu, Fuchu He, Xiaoming Yang

Bioinform., 2019

PANDA: A comprehensive and flexible tool for quantitative proteomics data analysis.

Cheng Chang, Mansheng Li, Chaoping Guo, Yuqing Ding, Kaikun Xu, Mingfei Han, Fuchu He, Yunping Zhu

Bioinform., 2019

2018

PANDA-view: an easy-to-use tool for statistical analysis and visualization of quantitative proteomics data.

Cheng Chang, Kaikun Xu, Chaoping Guo, Jinxia Wang, Qi Yan, Jian Zhang, Fuchu He, Yunping Zhu

Bioinform., 2018

AllerGAtlas 1.0: a human allergy-related genes database.

Jinying Liu, Yuan Liu, Dan Wang, Mengqi He, Lihong Diao, Zhongyang Liu, Yang Li, Li Tang, Fuchu He, Dong Li, Shuzhen Guo

Database J. Biol. Databases Curation, 2018

2017

HisgAtlas 1.0: a human immunosuppression gene database.

Yuan Liu, Mengqi He, Dan Wang, Lihong Diao, Jinying Liu, Li Tang, Shuzhen Guo, Fuchu He, Dong Li

Database J. Biol. Databases Curation, 2017

2016

ICM: a web server for integrated clustering of multi-dimensional biomedical data.

Song He, Haochen He, Wenjian Xu, Xin Huang, Shuai Jiang, Fei Li, Fuchu He, Xiaochen Bo

Nucleic Acids Res., 2016

2015

Similarity-based prediction for Anatomical Therapeutic Chemical classification of drugs by integrating multiple data sources.

Zhongyang Liu, Feifei Guo, Jiangyong Gu, Yong Wang, Yang Li, Dan Wang, Liang Lu, Dong Li, Fuchu He

Bioinform., 2015

2014

SILVER: an efficient tool for stable isotope labeling LC-MS data quantitative analysis with quality control methods.

Cheng Chang, Jiyang Zhang, Mingfei Han, Jie Ma, Wei Zhang, Songfeng Wu, Kehui Liu, Hongwei Xie, Fuchu He, Yunping Zhu

Bioinform., 2014

2013

Reconstruction of Signaling Network from Protein Interactions Based on Function Annotations.

Wei Liu, Dong Li, Yunping Zhu, Hongwei Xie, Fuchu He

IEEE ACM Trans. Comput. Biol. Bioinform., 2013

2012

Using NMFAS to identify key biological pathways associated with human diseases.

Hao Guo, Yunping Zhu, Dong Li, Fuchu He, Qijun Liu

Proceedings of the 6th IEEE International Conference on Systems Biology, 2012

2010

Computational identification of rare codons of <i>Escherichia coli </i>based on codon pairs preference.

Xianming Wu, Songfeng Wu, Dong Li, Jiyang Zhang, Lin Hou, Jie Ma, Wanlin Liu, Daming Ren, Yunping Zhu, Fuchu He

BMC Bioinform., 2010

A novel parametric approach to mine gene regulatory relationship from microarray datasets.

Wanlin Liu, Dong Li, Qijun Liu, Yunping Zhu, Fuchu He

BMC Bioinform., 2010

2008

A nonparametric model for quality control of database search results in shotgun proteomics.

Jiyang Zhang, Jianqi Li, Xin Liu, Hongwei Xie, Yunping Zhu, Fuchu He

BMC Bioinform., 2008

2006

<i>SigFlux</i>: A novel network feature to evaluate the importance of proteins in signal transduction networks.

Wei Liu, Dong Li, Jiyang Zhang, Yunping Zhu, Fuchu He

BMC Bioinform., 2006

2003

LDA - a java-based linkage disequilibrium analyzer.

Keyue Ding, Kaixin Zhou, Fuchu He, Yan Shen

Bioinform., 2003