Frederik Maes

Orcid: 0000-0003-0027-1479

Affiliations:
  • University Hospitals Leuven, Medical Imaging Research Center
  • KU Leuven, Department of Electrical Engineering


According to our database1, Frederik Maes authored at least 137 papers between 1995 and 2023.

Collaborative distances:
  • Dijkstra number2 of five.
  • Erdős number3 of four.

Timeline

Legend:

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PhD thesis 
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Online presence:

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Bibliography

2023
Factorizer: A scalable interpretable approach to context modeling for medical image segmentation.
Medical Image Anal., 2023

Cascade UNets for Kidney and Kidney Tumor Segmentation.
Proceedings of the Kidney and Kidney Tumor Segmentation - MICCAI 2023 Challenge, 2023

Deep Learning Approaches for Automated Classification of Muscular Dystrophies from MRI.
Proceedings of 2023 International Conference on Medical Imaging and Computer-Aided Diagnosis, 2023

2022
Cross-Modal Distillation to Improve MRI-Based Brain Tumor Segmentation With Missing MRI Sequences.
IEEE Trans. Biomed. Eng., 2022

Shape constrained CNN for segmentation guided prediction of myocardial shape and pose parameters in cardiac MRI.
Medical Image Anal., 2022

Corrigendum: Artificial Intelligence Based Patient-Specific Preoperative Planning Algorithm for Total Knee Arthroplasty.
Frontiers Robotics AI, 2022

Artificial Intelligence Based Patient-Specific Preoperative Planning Algorithm for Total Knee Arthroplasty.
Frontiers Robotics AI, 2022

Classification of multiple sclerosis clinical profiles using machine learning and grey matter connectome.
Frontiers Robotics AI, 2022

The Dice loss in the context of missing or empty labels: Introducing Φ and ε.
CoRR, 2022

The Dice Loss in the Context of Missing or Empty Labels: Introducing $\varPhi $ and ε.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2022, 2022

A Kernel Based Multilinear SVD Approach for Multiple Sclerosis Profiles Classification.
Proceedings of the 30th European Symposium on Artificial Neural Networks, 2022

2021
Improving T1w MRI-based brain tumor segmentation using cross-modal distillation.
Proceedings of the Medical Imaging 2021: Image Processing, Online, February 15-19, 2021, 2021

On the Relationship Between Calibrated Predictors and Unbiased Volume Estimation.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2021 - 24th International Conference, Strasbourg, France, September 27, 2021

Learning from Mistakes: An Error-Driven Mechanism to Improve Segmentation Performance Based on Expert Feedback.
Proceedings of the Clinical Image-Based Procedures, Distributed and Collaborative Learning, Artificial Intelligence for Combating COVID-19 and Secure and Privacy-Preserving Machine Learning, 2021

Convolutional LSTM.
Proceedings of the Computer-Aided Analysis of Gastrointestinal Videos, 2021

2020
Optimization for Medical Image Segmentation: Theory and Practice When Evaluating With Dice Score or Jaccard Index.
IEEE Trans. Medical Imaging, 2020

Explainable-by-design Semi-Supervised Representation Learning for COVID-19 Diagnosis from CT Imaging.
CoRR, 2020

Comparative study of deep learning methods for the automatic segmentation of lung, lesion and lesion type in CT scans of COVID-19 patients.
CoRR, 2020

Segmentation of head-and-neck organs-at-risk in longitudinal CT scans combining deformable registrations and convolutional neural networks.
Comput. methods Biomech. Biomed. Eng. Imaging Vis., 2020

Shape Constrained CNN for Cardiac MR Segmentation with Simultaneous Prediction of Shape and Pose Parameters.
Proceedings of the Statistical Atlases and Computational Models of the Heart. M&Ms and EMIDEC Challenges, 2020

Low-Rank Convolutional Networks for Brain Tumor Segmentation.
Proceedings of the Brainlesion: Glioma, Multiple Sclerosis, Stroke and Traumatic Brain Injuries, 2020

2019
Robust motion correction for cardiac T1 and ECV mapping using a T1 relaxation model approach.
Medical Image Anal., 2019

Optimizing the Dice Score and Jaccard Index for Medical Image Segmentation: Theory & Practice.
CoRR, 2019

Feasibility of CT-Only 3D Dose Prediction for VMAT Prostate Plans Using Deep Learning.
Proceedings of the Artificial Intelligence in Radiation Therapy, 2019

Left Ventricular Parameter Regression from Deep Feature Maps of a Jointly Trained Segmentation CNN.
Proceedings of the Statistical Atlases and Computational Models of the Heart. Multi-Sequence CMR Segmentation, CRT-EPiggy and LV Full Quantification Challenges, 2019

3D Left Ventricular Segmentation from 2D Cardiac MR Images Using Spatial Context.
Proceedings of the Statistical Atlases and Computational Models of the Heart. Multi-Sequence CMR Segmentation, CRT-EPiggy and LV Full Quantification Challenges, 2019

Optimizing the Dice Score and Jaccard Index for Medical Image Segmentation: Theory and Practice.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2019, 2019

2018
Preprocessing of Heteroscedastic Medical Images.
IEEE Access, 2018

Clinical Implementation of DeepVoxNet for Auto-Delineation of Organs at Risk in Head and Neck Cancer Patients in Radiotherapy.
Proceedings of the OR 2.0 Context-Aware Operating Theaters, Computer Assisted Robotic Endoscopy, Clinical Image-Based Procedures, - and - Skin Image Analysis, 2018

Segmentation of Head and Neck Organs-At-Risk in Longitudinal CT Scans Combining Deformable Registrations and Convolutional Neural Networks.
Proceedings of the Deep Learning in Medical Image Analysis - and - Multimodal Learning for Clinical Decision Support, 2018

2017
Multiparametric Non-Negative Matrix Factorization for Longitudinal Variations Detection in White-Matter Fiber Bundles.
IEEE J. Biomed. Health Informatics, 2017

Convexity-constrained and nonnegativity-constrained spherical factorization in diffusion-weighted imaging.
NeuroImage, 2017

Semi-automated brain tumor segmentation on multi-parametric MRI using regularized non-negative matrix factorization.
BMC Medical Imaging, 2017

Robust Model-Based Registration of Cardiac MR Images for T1 and ECV Mapping.
Proceedings of the Functional Imaging and Modelling of the Heart, 2017

Comparison of manual and semi-manual delineations for classifying glioblastoma multiforme patients based on histogram and texture MRI features.
Proceedings of the 25th European Symposium on Artificial Neural Networks, 2017

2016
Simultaneous segmentation and anatomical labeling of the cerebral vasculature.
Medical Image Anal., 2016

A Semi-Automated Segmentation Framework for MRI Based Brain Tumor Segmentation Using Regularized Nonnegative Matrix Factorization.
Proceedings of the 12th International Conference on Signal-Image Technology & Internet-Based Systems, 2016

Unsupervised Framework for Consistent Longitudinal MS Lesion Segmentation.
Proceedings of the Medical Computer Vision and Bayesian and Graphical Models for Biomedical Imaging, 2016

Validation of an Improved Patient-Specific Mold Design for Registration of In-vivo MRI and Histology of the Prostate.
Proceedings of the Clinical Image-Based Procedures. Translational Research in Medical Imaging, 2016

Inferring brain deformation during open neurosurgery using CBCT angiography.
Proceedings of the 13th IEEE International Symposium on Biomedical Imaging, 2016

Patch based super-resolution of MR spectroscopic images.
Proceedings of the 13th IEEE International Symposium on Biomedical Imaging, 2016

An untrained and unsupervised method for MRI brain tumor segmentation.
Proceedings of the 13th IEEE International Symposium on Biomedical Imaging, 2016

White Matter Fiber-Bundle Analysis Using Non-negative Tensor Factorization.
Proceedings of the Image Analysis and Recognition - 13th International Conference, 2016

Initializing nonnegative matrix factorization using the successive projection algorithm for multi-parametric medical image segmentation.
Proceedings of the 24th European Symposium on Artificial Neural Networks, 2016

2015
Global tractography of multi-shell diffusion-weighted imaging data using a multi-tissue model.
NeuroImage, 2015

Perfusion Paths: Inference of Voxelwise Blood Flow Trajectories in CT Perfusion.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2015, 2015

A Voxel-Wise, Cascaded Classification Approach to Ischemic Stroke Lesion Segmentation.
Proceedings of the Brainlesion: Glioma, Multiple Sclerosis, Stroke and Traumatic Brain Injuries, 2015

ISLES Challenge 2015: Automated Model-Based Segmentation of Ischemic Stroke in MR Images.
Proceedings of the Brainlesion: Glioma, Multiple Sclerosis, Stroke and Traumatic Brain Injuries, 2015

Convex Non-negative Spherical Factorization of Multi-Shell Diffusion-Weighted Images.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2015, 2015

2014
Unsupervised Segmentation, Clustering, and Groupwise Registration of Heterogeneous Populations of Brain MR Images.
IEEE Trans. Medical Imaging, 2014

Multimodal imaging of subventricular zone neural stem/progenitor cells in the cuprizone mouse model reveals increased neurogenic potential for the olfactory bulb pathway, but no contribution to remyelination of the corpus callosum.
NeuroImage, 2014

Track Orientation Density Imaging (TODI) and Track Orientation Distribution (TOD) based tractography.
NeuroImage, 2014

Registration-based filtering: An acceptable tool for noise reduction in left ventricular dynamic rotational angiography images?
Proceedings of the Medical Imaging 2014: Image-Guided Procedures, 2014

2013
Elastic Image Registration Versus Speckle Tracking for 2-D Myocardial Motion Estimation: A Direct Comparison In Vivo.
IEEE Trans. Medical Imaging, 2013

Anatomical Labeling of the Circle of Willis Using Maximum A Posteriori Graph Matching.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2013, 2013

Groupwise Deformable Registration of Fiber Track Sets Using Track Orientation Distributions.
Proceedings of the Computational Diffusion MRI and Brain Connectivity, 2013

Influence of the Grid Topology of Free-Form Deformation Models on the Performance of 3D Strain Estimation in Echocardiography.
Proceedings of the Functional Imaging and Modeling of the Heart, 2013

2012
Quantitative evaluation of MRI-based tracking of ferritin-labeled endogenous neural stem cell progeny in rodent brain.
NeuroImage, 2012

Intra-patient Non-rigid Registration of 3D Vascular Cerebral Images.
Proceedings of the Clinical Image-Based Procedures. From Planning to Intervention, 2012

Three-Dimensional Cardiac Motion Estimation Based on Non-rigid Image Registration Using a Novel Transformation Model Adapted to the Heart.
Proceedings of the Statistical Atlases and Computational Models of the Heart. Imaging and Modelling Challenges, 2012

Motion and deformation estimation of cardiac ultrasound sequences using an anatomical B-spline transformation model.
Proceedings of the 9th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2012

2011
Probabilistic framework for subject-specific and population-based analysis of longitudinal changes and disease progression in brain MR images.
Proceedings of the Medical Imaging 2011: Image Processing, 2011

A 3D+Time Spatio-temporal Model for Joint Segmentation and Registration of Sparse Cardiac Cine MR Image Stacks.
Proceedings of the Statistical Atlases and Computational Models of the Heart. Imaging and Modelling Challenges, 2011

Feasibility and Advantages of Diffusion Weighted Imaging Atlas Construction in Q-Space.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2011, 2011

Impact of RF inhomogeneity correction on image registration of micro MRI rodent brain images.
Proceedings of the 8th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2011

2010
Nonrigid Image Registration Using Conditional Mutual Information.
IEEE Trans. Medical Imaging, 2010

Automatic 3-D Breath-Hold Related Motion Correction of Dynamic Multislice MRI.
IEEE Trans. Medical Imaging, 2010

Semisupervised Probabilistic Clustering of Brain MR Images Including Prior Clinical Information.
Proceedings of the Medical Computer Vision. Recognition Techniques and Applications in Medical Imaging, 2010

SPARC: unified framework for automatic segmentation, probabilistic atlas construction, registration and clustering of brain MR images.
Proceedings of the 2010 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2010

Voxel based nonrigid image registration using local and partial volume similarity measures.
Proceedings of the 2010 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2010

2009
Validation of nonrigid registration for multi-tracer PET-CT treatment planning in rectal cancer radiotherapy.
Proceedings of the Medical Imaging 2009: Image Processing, 2009

The Minimal Entropy Prior for Simultaneous Reconstruction and Segmentation of in Vivo Microct Trabecular Bone Images.
Proceedings of the 2009 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, Boston, MA, USA, June 28, 2009

2008
Three-Dimensional Cardiac Strain Estimation Using Spatio-Temporal Elastic Registration of Ultrasound Images: A Feasibility Study.
IEEE Trans. Medical Imaging, 2008

On the construction of an inter-subject diffusion tensor magnetic resonance atlas of the healthy human brain.
NeuroImage, 2008

Model-Based Segmentation Using Graph Representations.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2008

Adaptive Boundary Conditions for Physically Based Follow-Up Breast MR Image Registration.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2008

A statistical framework for the registration of 3D knee implant components to single-plane X-ray images.
Proceedings of the IEEE Conference on Computer Vision and Pattern Recognition, 2008

2007
Minimal Shape and Intensity Cost Path Segmentation.
IEEE Trans. Medical Imaging, 2007

Linear normalization of MR brain images in pediatric patients with periventricular leukomalacia.
NeuroImage, 2007

Predicting soft tissue deformations for a maxillofacial surgery planning system: From computational strategies to a complete clinical validation.
Medical Image Anal., 2007

Visual enhancement of interval changes using a temporal subtraction technique.
Proceedings of the Medical Imaging 2007: Image Processing, 2007

Evaluation of a Novel Calibration Technique for Optically Tracked Oblique Laparoscopes.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2007, 10th International Conference, Brisbane, Australia, October 29, 2007

Atlas-to-Image Non-rigid Registration by Minimization of Conditional Local Entropy.
Proceedings of the Information Processing in Medical Imaging, 2007

2006
An information theoretic approach for non-rigid image registration using voxel class probabilities.
Medical Image Anal., 2006

Nonrigid Registration of Multitemporal CT and MR Images for Radiotherapy Treatment Planning.
Proceedings of the Biomedical Image Registration, Third International Workshop, 2006

Comparison Between Parzen Window Interpolation and Generalised Partial Volume Estimation for Nonrigid Image Registration Using Mutual Information.
Proceedings of the Biomedical Image Registration, Third International Workshop, 2006

A Unified Framework for Atlas Based Brain Image Segmentation and Registration.
Proceedings of the Biomedical Image Registration, Third International Workshop, 2006

Non-rigid brain image registration using a statistical deformation model.
Proceedings of the Medical Imaging 2006: Image Processing, 2006

Large-scale validation of non-rigid registration algorithms for atlas-based brain image segmentation.
Proceedings of the Medical Imaging 2006: Image Processing, 2006

Image segmentation using local shape and gray-level appearance models.
Proceedings of the Medical Imaging 2006: Image Processing, 2006

Pre-operative simulation and post-operative validation of soft-tissue deformations for breast implantation planning.
Proceedings of the Medical Imaging 2006: Visualization, 2006

3D soft tissue predictions with a tetrahedral mass tensor model for a maxillofacial planning system: a quantitative validation study.
Proceedings of the Medical Imaging 2006: Visualization, 2006

Biomechanically Based Elastic Breast Registration Using Mass Tensor Simulation.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2006

Image Based Musculoskeletal Modeling Allows Personalized Biomechanical Analysis of Gait.
Proceedings of the Biomedical Simulation, Third International Symposium, 2006

Simulation of Soft-Tissue Deformations for Breast Augmentation Planning.
Proceedings of the Biomedical Simulation, Third International Symposium, 2006

Parameter Optimisation of a Linear Tetrahedral Mass Tensor Model for a Maxillofacial Soft Tissue Simulator.
Proceedings of the Biomedical Simulation, Third International Symposium, 2006

2005
An augmented reality system for patient-specific guidance of cardiac catheter ablation procedures.
IEEE Trans. Medical Imaging, 2005

Feature-based statistical analysis of structural MR data for automatic detection of focal cortical dysplastic lesions.
NeuroImage, 2005

Automatic analysis of cerebral asymmetry: an exploratory study of the relationship between brain torque and planum temporale asymmetry.
NeuroImage, 2005

Catheter based calibration for augmented reality guidance of cardiac thermo-ablation procedures.
Proceedings of the Medical Imaging 2005: Visualization, 2005

Plaque and Stent Artifact Reduction in Subtraction CT Angiography Using Nonrigid Registration and a Volume Penalty.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2005

Construction and Validation of Mean Shape Atlas Templates for Atlas-Based Brain Image Segmentation.
Proceedings of the Information Processing in Medical Imaging, 2005

2004
Effects of Anatomical Asymmetry in Spatial Priors on Model-Based Segmentation of the Brain MRI: A Validation Study.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention -- MICCAI 2004, 2004

Construction of a Brain Template from MR Images Using State-of-the-Art Registration and Segmentation Techniques.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention -- MICCAI 2004, 2004

Nonrigid Image Registration Using Free-Form Deformations with a Local Rigidity Constraint.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention -- MICCAI 2004, 2004

Non-rigid Atlas-to-Image Registration by Minimization of Class-Conditional Image Entropy.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention -- MICCAI 2004, 2004

Feature Based Statistical Analysis of Structural MR Data for Automatic Detection of Focal Cortical Dysplastic (FCD) Lesions.
Proceedings of the 2004 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2004

2003
Temporal subtraction of thorax CR-images using a statistical deformation model.
IEEE Trans. Medical Imaging, 2003

A Unifying Framework for Partial Volume Segmentation of Brain MR Images.
IEEE Trans. Medical Imaging, 2003

Medical image registration using mutual information.
Proc. IEEE, 2003

A viscous fluid model for multimodal non-rigid image registration using mutual information.
Medical Image Anal., 2003

Free-Form Registration Using Mutual Information and Curvature Regularization.
Proceedings of the Biomedical Image Registration, Second International Workshop, 2003

Visualizing electrocardiographic information on a patient specific model of the heart.
Proceedings of the Medical Imaging 2003: Visualization, 2003

An Automated 3D Algorithm for Neo-cortical Thickness Measurement.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2003

Temporal Subtraction of Thorax CR Images.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2003

An Augmented Reality Approach Using Pre-operative Patient Specific Images to Guide Thermo-Ablation Procedures.
Proceedings of the Surgery Simulation and Soft Tissue Modeling, International Symposium, 2003

Non-rigid Image Registration Using a Statistical Spline Deformation Model.
Proceedings of the Information Processing in Medical Imaging, 2003

2002
Retrospective correction of the heel effect in hand radiographs.
Medical Image Anal., 2002

Evaluation of image features and search strategies for segmentation of bone structures in radiographs using Active Shape Models.
Medical Image Anal., 2002

2001
Automated Segmentation of Multiple Sclerosis Lesions by Model Outlier Detection.
IEEE Trans. Medical Imaging, 2001

Validation of Nonlinear Spatial Filtering to Improve Tissue Segmentation of MR Brain Images.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2001

A Statistical Framework for Partial Volume Segmentation.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 2001

2000
Emerging Possibilities of Image Processing and how this will influence Radiological-Clinical Cooperation.
Proceedings of the From PACS to Internet/Intranet, 2000

1999
Automated Model-Based Tissue Classification of MR Images of the Brain.
IEEE Trans. Medical Imaging, 1999

Automated model-based bias field correction of MR images of the brain.
IEEE Trans. Medical Imaging, 1999

Automatic 3D Segmentation of Internal Structures on the Head in MR Images Using a Combination of Similarity and Free Form Transormations: Part I, Metholody and Validation on Normal Subjects.
IEEE Trans. Medical Imaging, 1999

Comparative evaluation of multiresolution optimization strategies for multimodality image registration by maximization of mutual information.
Medical Image Anal., 1999

Quantification of Cerebral Grey and White Matter Asymmetry from MRI.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 1999

Automated Segmentation of MS Lesions from Multi-channel MR Images.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 1999

Active Shape Model-Based Segmentation of Digital X-ray Images.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 1999

1998
The EASI project-improving the effectiveness and quality of image-guided surgery.
IEEE Trans. Inf. Technol. Biomed., 1998

Automatic 3D segmentation of internal structures of the head in MR images using a combination of similarity and free-form transformations.
Proceedings of the Medical Imaging 1998: Image Processing, 1998

Automatic Segmentation of Brain Tissues and MR Bias Field Correction Using a Cigital Brain Atlas.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 1998

Non-rigid Multimodal Image Registration Using Mutual Information.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention, 1998

1997
Multimodality Image Registration by Maximization of Mutual Information.
IEEE Trans. Medical Imaging, 1997

1996

1995
Computer-Aided Interactive Object Delineation Using an Intelligent Paintbrush Technique.
Proceedings of the Computer Vision, 1995


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