Frank Eisenhaber

Orcid: 0000-0002-9599-5420

According to our database1, Frank Eisenhaber authored at least 38 papers between 1993 and 2023.

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Bibliography

2023
Generalized metabolic flux analysis framework provides mechanism-based predictions of ophthalmic complications in type 2 diabetes patients.
Health Inf. Sci. Syst., December, 2023

2019
Translational Informatics Management System (TIMS): Towards OMICS based clinical data management for long term curation of clinical studies.
J. Open Source Softw., 2019

In Memory of Vladimir B. Bajic (1952-2019).
Genom. Proteom. Bioinform., 2019

AllerCatPro - prediction of protein allergenicity potential from the protein sequence.
Bioinform., 2019

2015
HPMV: Human protein mutation viewer - relating sequence mutations to protein sequence architecture and function changes.
J. Bioinform. Comput. Biol., 2015

2014
Guest Editorial for the International Conference on Genome Informatics (GIW 2013).
IEEE ACM Trans. Comput. Biol. Bioinform., 2014

10 years for the Journal of Bioinformatics and Computational Biology (2003-2013) - A retrospective.
J. Bioinform. Comput. Biol., 2014

Unix interfaces, Kleisli, bucandin structure, etc. - The heroic beginning of bioinformatics in Singapore.
J. Bioinform. Comput. Biol., 2014

On the necessity of dissecting sequence similarity scores into segment-specific contributions for inferring protein homology, function prediction and annotation.
BMC Bioinform., 2014

2013
SPACER: server for predicting allosteric communication and effects of regulation.
Nucleic Acids Res., 2013

A Simple Shortcut to Unsupervised Alignment-Free phylogenetic genome Groupings, even from Unassembled sequencing reads.
J. Bioinform. Comput. Biol., 2013

Motif Discovery with Data Mining in 3D protein Structure Databases: Discovery, Validation and Prediction of the U-Shape zinc binding ("Huf-zinc") Motif.
J. Bioinform. Comput. Biol., 2013

Automatic phylogenetic Classification of bacterial beta-Lactamase Sequences including Structural and Antibiotic substrate Preference Information.
J. Bioinform. Comput. Biol., 2013

The 24th International Conference on genome Informatics, Giw2013, in Singapore.
J. Bioinform. Comput. Biol., 2013

How bioinformatics influences health informatics: usage of biomolecular sequences, expression profiles and automated microscopic image analyses for clinical needs and public health.
Health Inf. Sci. Syst., 2013

International Conference on Genome Informatics (GIW 2013) in Singapore: introduction to the systems biology contributions.
BMC Syst. Biol., 2013

2012
Transmembrane helix: simple or complex.
Nucleic Acids Res., 2012

Beware of Moving targets: Reference proteome Content Fluctuates substantially over the Years.
J. Bioinform. Comput. Biol., 2012

A Decade after the First Full Human genome sequencing: when will We Understand our Own genome?
J. Bioinform. Comput. Biol., 2012

Tachyon search speeds up retrieval of similar sequences by several orders of magnitude.
Bioinform., 2012

2011
The Janus-Faced E-Values of Hmmer2: Extreme Value Distribution or logistic Function?
J. Bioinform. Comput. Biol., 2011

2010
More Than 1, 001 Problems with Protein Domain Databases: Transmembrane Regions, Signal Peptides and the Issue of Sequence Homology.
PLoS Comput. Biol., 2010

Is Lgi2 the Candidate Gene for Partial Epilepsy with Pericentral Spikes?
J. Bioinform. Comput. Biol., 2010

2009
Brief Overview of Bioinformatics Activities in Singapore.
PLoS Comput. Biol., 2009

ANNIE: integrated <i>de novo</i> protein sequence annotation.
Nucleic Acids Res., 2009

2007
Towards Complete Sets of Farnesylated and Geranylgeranylated Proteins.
PLoS Comput. Biol., 2007

2006
DOUTfinder - identification of distant domain outliers using subsignificant sequence similarity.
Nucleic Acids Res., 2006

Application of a sensitive collection heuristic for very large protein families: Evolutionary relationship between adipose triglyceride lipase (ATGL) and classic mammalian lipases.
BMC Bioinform., 2006

2005
PhyloDome - visualization of taxonomic distributions of domains occurring in eukaryote protein sequence sets.
Nucleic Acids Res., 2005

Proteins with two SUMO-like domains in chromatin-associated complexes: The RENi (Rad60-Esc2-NIP45) family.
BMC Bioinform., 2005

2004
TM or not TM: transmembrane protein prediction with low false positive rate using DAS-TMfilter.
Bioinform., 2004

2003
Prediction of lipid posttranslational modifications and localization signals from protein sequences: big-, NMT and PTS1.
Nucleic Acids Res., 2003

Reannotation of the CELO genome characterizes a set of previously unassigned open reading frames and points to novel modes of host interaction in avian adenoviruses.
BMC Bioinform., 2003

2001
Taxonomy workbench.
Bioinform., 2001

1999
Evaluation of human-readable annotation in biomolecular sequence databases with biological rule libraries.
Bioinform., 1999

1998
Analysis of the position dependent amino acid probabilities and its application to the search for remote homologues.
Proceedings of the Second Annual International Conference on Research in Computational Molecular Biology, 1998

1995
The Double Cubic Lattice Method: Efficient Approaches to Numerical Integration of Surface Area and Volume and to Dot Surface Contouring of Molecular Assemblies.
J. Comput. Chem., 1995

1993
Improved strategy in analytic surface calculation for molecular systems: Handling of singularities and computational efficiency.
J. Comput. Chem., 1993


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