Francesco Pappalardo
Orcid: 0000-0003-1668-3320Affiliations:
- University of Catania, Italy
According to our database1,
Francesco Pappalardo
authored at least 113 papers
between 2000 and 2024.
Collaborative distances:
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Bibliography
2024
Pioneering bioinformatics with agent-based modelling: an innovative protocol to accurately forecast skin or respiratory allergic reactions to chemical sensitizers.
Briefings Bioinform., 2024
ICPR 2024 Competition on Multiple Sclerosis Lesion Segmentation - Methods and Results.
Proceedings of the Pattern Recognition. Competitions - 27th International Conference, 2024
2023
Beyond the state of the art of reverse vaccinology: predicting vaccine efficacy with the universal immune system simulator for influenza.
BMC Bioinform., December, 2023
Comput. Biol. Medicine, July, 2023
Machine Learning techniques application to predict the quality of life degree in breast cancer patients.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2023
Enhancing Multiple Sclerosis Lesion Segmentation in Multimodal MRI Scans with Diffusion Models.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2023
Genetic Algorithm-Based Prediction of Emerging SARS-CoV-2 Variants: A Computational Biology Perspective.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2023
Universal Immune System Simulator Analysis: The Impact of the Variable Approach Technique® on Enhancing Immune Defense Against infectious diseases.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2023
Modeling Cutaneous Leishmaniasis: Insights into M1/M2 Macrophage Dynamics Using the Universal Immune System Simulator.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2023
Predictive Modelling of Allergic Responses to Chemical Sensitizers: Distinguishing Skin and Respiratory Reactions.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2023
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2023
2022
Toward A Regulatory Pathway for the Use of in Silico Trials in the CE Marking of Medical Devices.
IEEE J. Biomed. Health Informatics, 2022
In silico clinical trials for relapsing-remitting multiple sclerosis with MS TreatSim.
BMC Medical Informatics Decis. Mak., 2022
A multi-step and multi-scale bioinformatic protocol to investigate potential SARS-CoV-2 vaccine targets.
Briefings Bioinform., 2022
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2022
Cutaneous Leishmaniasis: discovering new effective therapies using the Universal Immune System Simulator.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2022
Genetic algorithm application for the prediction of potential SARS-CoV-2 new variant of concern.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2022
2021
Possible Contexts of Use for In Silico Trials Methodologies: A Consensus-Based Review.
IEEE J. Biomed. Health Informatics, 2021
Evaluation of word embedding models to extract and predict surgical data in breast cancer.
BMC Bioinform., 2021
Model verification tools: a computational framework for verification assessment of mechanistic agent-based models.
BMC Bioinform., 2021
BMC Bioinform., 2021
Proceedings of the NANOCOM '21: The Eighth Annual ACM International Conference on Nanoscale Computing and Communication, Virtual Event, Italy, September 7, 2021
PEAK: A Clever Python Tool for Exploratory, Regression, and Classification Data. A Case Study for COVID-19.
Proceedings of the Bioengineering and Biomedical Signal and Image Processing, 2021
A multi-step and multi-scale bioinformatic approach to investigate potential source of cross-reactive immunity against SARS-CoV-2 UK variant.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2021
Uncertainty quantification and sensitivity analysis for in silico trial platform: a preliminary application on UISS-MS.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2021
2020
IEEE J. Biomed. Health Informatics, 2020
In Silico Trial to test COVID-19 candidate vaccines: a case study with UISS platform.
CoRR, 2020
Moving forward through the in silico modeling of tuberculosis: a further step with UISS-TB.
BMC Bioinform., 2020
In silico trial to test COVID-19 candidate vaccines: a case study with UISS platform.
BMC Bioinform., 2020
Computational modeling of the immune response in multiple sclerosis using epimod framework.
BMC Bioinform., 2020
BMC Bioinform., 2020
Evaluation of the predictive capability of PETAL tool: a retrospective study on potential tyrosine kinases drug resistance targets.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2020
Modeling, simulation and prediction of protein structures for the design of oncolytic viruses.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2020
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2020
2019
A computational approach based on the colored Petri net formalism for studying multiple sclerosis.
BMC Bioinform., December, 2019
BMC Bioinform., December, 2019
Proceedings of the Encyclopedia of Bioinformatics and Computational Biology - Volume 2, 2019
CoRR, 2019
Predicting the artificial immunity induced by RUTI® vaccine against tuberculosis using universal immune system simulator (UISS).
BMC Bioinform., 2019
BMC Bioinform., 2019
EpiMethEx: a tool for large-scale integrated analysis in methylation hotspots linked to genetic regulation.
BMC Bioinform., 2019
Computational modeling reveals MAP3K8 as mediator of resistance to vemurafenib in thyroid cancer stem cells.
Bioinform., 2019
Proceedings of the 27th Euromicro International Conference on Parallel, 2019
Multiple Sclerosis Disease: A Computational Approach for Investigating Its Drug Interactions.
Proceedings of the Computational Intelligence Methods for Bioinformatics and Biostatistics, 2019
In Silico Evaluation of Daclizumab and Vitamin D Effects in Multiple Sclerosis Using Agent Based Models.
Proceedings of the Computational Intelligence Methods for Bioinformatics and Biostatistics, 2019
Gene expression and pathway bioinformatics analysis detect a potential predictive value of MAP3K8 in thyroid cancer progression.
Proceedings of the 2019 IEEE International Conference on Bioinformatics and Biomedicine, 2019
Evaluation of the efficacy of RUTI and ID93/GLA-SE vaccines in tuberculosis treatment: in silico trial through UISS-TB simulator.
Proceedings of the 2019 IEEE International Conference on Bioinformatics and Biomedicine, 2019
Exploiting Stochastic Petri Net formalism to capture the Relapsing Remitting Multiple Sclerosis variability under Daclizumab administration.
Proceedings of the 2019 IEEE International Conference on Bioinformatics and Biomedicine, 2019
Proceedings of the 2019 IEEE International Conference on Bioinformatics and Biomedicine, 2019
A MapReduce tool for in-depth analysis of KEGG pathways: identification and visualization of therapeutic target candidates.
Proceedings of the 2019 IEEE International Conference on Bioinformatics and Biomedicine, 2019
2018
IEEE ACM Trans. Comput. Biol. Bioinform., 2018
Briefings Bioinform., 2018
Combining Parallel Genetic Algorithms and Machine Learning to Improve the Research of Optimal Vaccination Protocols.
Proceedings of the 26th Euromicro International Conference on Parallel, 2018
BIOESOnet: A Tool for the Generation of Personalized Human Metabolic Pathways from 23andMe Exome Data.
Proceedings of the Intelligent Computing Theories and Application, 2018
GPU Accelerated Analysis of Treg-Teff Cross Regulation in Relapsing-Remitting Multiple Sclerosis.
Proceedings of the Euro-Par 2018: Parallel Processing Workshops, 2018
Efficient and Settings-Free Calibration of Detailed Kinetic Metabolic Models with Enzyme Isoforms Characterization.
Proceedings of the Computational Intelligence Methods for Bioinformatics and Biostatistics, 2018
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2018
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2018
Agent based modeling of relapsing multiple sclerosis: a possible approach to predict treatment outcome.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2018
An agent based modeling approach for the analysis of tuberculosis - immune system dynamics.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2018
2017
Combining agent based-models and virtual screening techniques to predict the best citrus-derived vaccine adjuvants against human papilloma virus.
BMC Bioinform., 2017
Proceedings of the Intelligent Computing Theories and Application, 2017
2DIs: A SBML Compliant Web Platform for the Design and Modeling of Immune System Interactions.
Proceedings of the Intelligent Computing Theories and Application, 2017
Introducing scale factor adjustments on agent-based simulations of the immune system.
Proceedings of the 2017 IEEE International Conference on Bioinformatics and Biomedicine, 2017
Optimization and analisys of vaccination schedules using simulated annealing and agent based models.
Proceedings of the 2017 IEEE International Conference on Bioinformatics and Biomedicine, 2017
2016
SHyFTA, a Stochastic Hybrid Fault Tree Automaton for the modelling and simulation of dynamic reliability problems.
Expert Syst. Appl., 2016
A methodological approach for using high-level Petri Nets to model the immune system response.
BMC Bioinform., 2016
A computational model to predict the immune system activation by citrus-derived vaccine adjuvants.
Bioinform., 2016
2015
Computational modeling of the expansion of human cord blood CD133<sup>+</sup> hematopoietic stem/progenitor cells with different cytokine combinations.
Bioinform., 2015
Targeting the Minimum Vertex Set Problem with an Enhanced Genetic Algorithm Improved with Local Search Strategies.
Proceedings of the Intelligent Computing Theories and Methodologies, 2015
2014
Bioinform., 2014
Proceedings of the Knowledge Engineering and the Semantic Web, 2014
Relapsing-remitting multiple scleroris and the role of vitamin D: an agent based model.
Proceedings of the 5th ACM Conference on Bioinformatics, 2014
2013
Agent based modeling of Treg-Teff cross regulation in relapsing-remitting multiple sclerosis.
BMC Bioinform., 2013
Proceedings of the SIMULTECH 2013, 2013
Proceedings of the ACM Conference on Bioinformatics, 2013
2012
BMC Medical Informatics Decis. Mak., 2012
BMC Bioinform., 2012
Proceedings of the Sixth International Conference on Complex, 2012
2011
Proceedings of the Bio-Inspired Computing and Applications, 2011
2010
BMC Bioinform., 2010
Proceedings of the Advanced Intelligent Computing Theories and Applications, 2010
Proceedings of the Advanced Intelligent Computing Theories and Applications, 2010
Proceedings of the First ACM International Conference on Bioinformatics and Computational Biology, 2010
2009
ImmunoGrid, an integrative environment for large-scale simulation of the immune system for vaccine discovery, design and optimization.
Briefings Bioinform., 2009
Proceedings of the Ninth International Conference on Intelligent Systems Design and Applications, 2009
Proceedings of the Emerging Intelligent Computing Technology and Applications. With Aspects of Artificial Intelligence, 2009
Proceedings of the Artificial Immune Systems, 8th International Conference, 2009
Proceedings of the CSIE 2009, 2009 WRI World Congress on Computer Science and Information Engineering, March 31, 2009
Proceedings of the Computational Intelligence Methods for Bioinformatics and Biostatistics, 2009
2008
2007
Optimization of HAART with genetic algorithms and agent-based models of HIV infection.
Bioinform., 2007
Proceedings of the Applications of Fuzzy Sets Theory, 2007
Proceedings of the Advanced Intelligent Computing Theories and Applications. With Aspects of Artificial Intelligence, 2007
2006
Discovery of cancer vaccination protocols with a genetic algorithm driving an agent based simulator.
BMC Bioinform., 2006
Proceedings of the Advances in Natural Computation, Second International Conference, 2006
2005
Proceedings of the Fuzzy Logic and Applications, 6th International Workshop, 2005
Proceedings of the Advances in Natural Computation, First International Conference, 2005
2004
Algoritmi evolutivi per l'approssimazione di problemi di ottimizzazione combinatorica.
PhD thesis, 2004
2003
Proceedings of the 2003 IEEE Swarm Intelligence Symposium, 2003
The Hitting Set Problem and Evolutionary Algorithmic Techniques with ad-hoc Viruses (HEAT-V).
Proceedings of the Genetic and Evolutionary Computation, 2003
2002
An evolutionary algorithm for the T-constrained variation of Minimum Hitting Set problem.
Proceedings of the 2002 Congress on Evolutionary Computation, 2002
2000
Proceedings of the 4th Annual Linux Showcase & Conference 2000, 2000