Francesca Spyrakis

According to our database, Francesca Spyrakis authored at least 6 papers between 2008 and 2023.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2023

Molecular Dynamics and Machine Learning Give Insights on the Flexibility-Activity Relationships in Tyrosine Kinome.

Sarmistha Majumdar, Francesco Di Palma, Francesca Spyrakis, Sergio Decherchi, Andrea Cavalli

J. Chem. Inf. Model., August, 2023

2020

Rational Design of a User-Friendly Aptamer/Peptide-Based Device for the Detection of Staphylococcus aureus.

Luca Ronda, Alessandro Tonelli, Elisa Sogne, Ida Autiero, Francesca Spyrakis, Sara Pellegrino, Giorgio Abbiati, Elisa Maffioli, Carsten Schulte, Riccardo Piano, Pietro Cozzini, Andrea Mozzarelli, Stefano Bettati, Francesca Clerici, Paolo Milani, Cristina Lenardi, Gabriella Tedeschi, Maria Luisa Gelmi

Sensors, 2020

2019

First virtual screening and experimental validation of inhibitors targeting GES-5 carbapenemase.

Francesca Spyrakis, Pierangelo Bellio, Antonio Quotadamo, Pasquale Linciano, Paolo Benedetti, Giulia D'Arrigo, Massimo Baroni, Laura Cendron, Giuseppe Celenza, Donatella Tondi

J. Comput. Aided Mol. Des., 2019

2015

A Pipeline To Enhance Ligand Virtual Screening: Integrating Molecular Dynamics and Fingerprints for Ligand and Proteins.

Francesca Spyrakis, Paolo Benedetti, Sergio Decherchi, Walter Rocchia, Andrea Cavalli, Stefano Alcaro, Francesco Ortuso, Massimo Baroni, Gabriele Cruciani

J. Chem. Inf. Model., 2015

2013

Unintended consequences? Water molecules at biological and crystallographic protein-protein interfaces.

Mostafa H. Ahmed, Mesay Habtemariam, Martin K. Safo, J. Neel Scarsdale, Francesca Spyrakis, Pietro Cozzini, Andrea Mozzarelli, Glen E. Kellogg

Comput. Biol. Chem., 2013

2008

Energy-based prediction of amino acid-nucleotide base recognition.

Anna Marabotti, Francesca Spyrakis, Angelo M. Facchiano, Pietro Cozzini, Saverio Alberti, Glen E. Kellogg, Andrea Mozzarelli

J. Comput. Chem., 2008