Francesca Finotello

According to our database, Francesca Finotello authored at least 12 papers between 2012 and 2022.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of three.

2022

nextNEOpi: a comprehensive pipeline for computational neoantigen prediction.

Dietmar Rieder, Georgios Fotakis, Markus Ausserhofer, Rene Geyeregger, Wolfgang Paster, Zlatko Trajanoski, Francesca Finotello

Bioinform., 2022

2021

Interpretable systems biomarkers predict response to immune-checkpoint inhibitors.

Óscar Lapuente-Santana, Maisa van Genderen, Peter A. J. Hilbers, Francesca Finotello, Federica Eduati

Patterns, 2021

2020

Scirpy: a Scanpy extension for analyzing single-cell T-cell receptor-sequencing data.

Gregor Sturm, Tamás Szabó, Georgios Fotakis, Marlene Haider, Dietmar Rieder, Zlatko Trajanoski, Francesca Finotello

Bioinform., 2020

NeoFuse: predicting fusion neoantigens from RNA sequencing data.

Georgios Fotakis, Dietmar Rieder, Marlene Haider, Zlatko Trajanoski, Francesca Finotello

Bioinform., 2020

2019

Comprehensive evaluation of transcriptome-based cell-type quantification methods for immuno-oncology.

Gregor Sturm, Francesca Finotello, Florent Petitprez, Jitao David Zhang, Jan Baumbach, Wolf-Herman Fridman, Markus List, Tatsiana Aneichyk

Bioinform., 2019

2018

Optimizing PCR primers targeting the bacterial 16S ribosomal RNA gene.

Francesco Sambo, Francesca Finotello, Enrico Lavezzo, Giacomo Baruzzo, Giulia Masi, Elektra Peta, Marco Falda, Stefano Toppo, Luisa Barzon, Barbara Di Camillo

BMC Bioinform., 2018

Measuring the diversity of the human microbiota with targeted next-generation sequencing.

Francesca Finotello, Eleonora Mastrorilli, Barbara Di Camillo

Briefings Bioinform., 2018

2017

Hypoglycemia-induced EEG complexity changes in Type 1 diabetes assessed by fractal analysis algorithm.

Fabio Scarpa, Maria Rubega, Mattia Zanon, Francesca Finotello, Anne-Sophie Sejling, Giovanni Sparacino

Biomed. Signal Process. Control., 2017

TIminer: NGS data mining pipeline for cancer immunology and immunotherapy.

Elias Tappeiner, Francesca Finotello, Pornpimol Charoentong, Clemens Mayer, Dietmar Rieder, Zlatko Trajanoski

Bioinform., 2017

2015

EEG signal features extraction based on fractal dimension.

Francesca Finotello, Fabio Scarpa, Mattia Zanon

Proceedings of the 37th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 2015

2014

Reducing bias in RNA sequencing data: a novel approach to compute counts.

Francesca Finotello, Enrico Lavezzo, Luca Bianco, Luisa Barzon, Paolo Mazzon, Paolo Fontana, Stefano Toppo, Barbara Di Camillo

BMC Bioinform., 2014

2012

Comparative analysis of algorithms for whole-genome assembly of pyrosequencing data.

Francesca Finotello, Enrico Lavezzo, Paolo Fontana, Denis Peruzzo, Alessandro Albiero, Luisa Barzon, Marco Falda, Barbara Di Camillo, Stefano Toppo

Briefings Bioinform., 2012