Franca Fraternali

According to our database, Franca Fraternali authored at least 13 papers between 2002 and 2022.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2022

PDBe-KB: collaboratively defining the biological context of structural data.

Mihaly Varadi, Stephen Anyango, David R. Armstrong, John M. Berrisford, Preeti Choudhary, Mandar S. Deshpande, Nurul Nadzirin, Sreenath Nair, Lukás Pravda, Ahsan Tanweer, Bissan Al-Lazikani, Claudia Andreini, Geoffrey J. Barton, David Bednar, Karel Berka, Tom L. Blundell, Kelly Brock, José María Carazo, Jirí Damborský, Alessia David, Sucharita Dey, Roland L. Dunbrack Jr., Juan Fernández-Recio, Franca Fraternali, Toby J. Gibson, Manuela Helmer-Citterich, David Hoksza, Thomas A. Hopf, David Jakubec, Natarajan Kannan, Radoslav Krivák, Manjeet Kumar, Emmanuel D. Levy, Nir London, José Ramón Macías, Mallur Srivatsan Madhusudhan, Debora S. Marks, Lennart Martens, Stuart A McGowan, Jake E. McGreig, Vivek Modi, R. Gonzalo Parra, Gerardo Pepe, Damiano Piovesan, Jaime Prilusky, Valeria Putignano, Leandro G. Radusky, Pathmanaban Ramasamy, Atilio O. Rausch, Nathalie Reuter, Luis A. Rodriguez, Nathan J. Rollins, Antonio Rosato, Pawel Rubach, Luis Serrano, Gulzar Singh, Petr Skoda, Carlos Oscar Sánchez Sorzano, Jan Stourac, Joanna I. Sulkowska, Radka Svobodová Vareková, Natalia Tichshenko, Silvio C. E. Tosatto, Wim F. Vranken, Mark N. Wass, Dandan Xue, Daniel Zaidman, Janet M. Thornton, Michael J. E. Sternberg, Christine A. Orengo, Sameer Velankar

Nucleic Acids Res., 2022

2020

PDBe-KB: a community-driven resource for structural and functional annotations.

Mihaly Varadi, John M. Berrisford, Mandar S. Deshpande, Sreenath Nair, Aleksandras Gutmanas, David R. Armstrong, Lukás Pravda, Bissan Al-Lazikani, Stephen Anyango, Geoffrey J. Barton, Karel Berka, Tom L. Blundell, Neera Borkakoti, Jose M. Dana, Sayoni Das, Sucharita Dey, Patrizio Di Micco, Franca Fraternali, Toby J. Gibson, Manuela Helmer-Citterich, David Hoksza, Liang-Chin Huang, Rishabh Jain, Harry Jubb, Christos C. Kannas, Natarajan Kannan, Jaroslav Koca, Radoslav Krivák, Manjeet Kumar, Emmanuel D. Levy, Fábio Madeira, M. S. Madhusudhan, Henry J. Martell, Stuart A. MacGowan, Jake E. McGreig, Saqib Mir, Abhik Mukhopadhyay, Luca Parca, Typhaine Paysan-Lafosse, Leandro G. Radusky, António J. M. Ribeiro, Luis Serrano, Ian Sillitoe, Gulzar Singh, Petr Skoda, Radka Svobodová Vareková, Jonathan D. Tyzack, Alfonso Valencia, Eloy D. Villasclaras-Fernández, Wim F. Vranken, Mark N. Wass, Janet M. Thornton, Michael J. E. Sternberg, Christine A. Orengo, Sameer Velankar

Nucleic Acids Res., 2020

2019

Prediction of Protein-Protein Interactions: Looking Through the Kaleidoscope.

Anna Laddach, Sun Sook Chung, Franca Fraternali

Proceedings of the Encyclopedia of Bioinformatics and Computational Biology - Volume 2, 2019

2018

BRepertoire: a user-friendly web server for analysing antibody repertoire data.

Christian Margreitter, Hui-Chun Lu, Catherine Townsend, Alexander Stewart, Deborah K. Dunn-Walters, Franca Fraternali

Nucleic Acids Res., 2018

In silico identification of rescue sites by double force scanning.

Matteo Tiberti, Alessandro Pandini, Franca Fraternali, Arianna Fornili

Bioinform., 2018

2017

TITINdb - a computational tool to assess titin's role as a disease gene.

Anna Laddach, Mathias Gautel, Franca Fraternali

Bioinform., 2017

2016

PinSnps: structural and functional analysis of SNPs in the context of protein interaction networks.

Hui-Chun Lu, Julián Herrera Braga, Franca Fraternali

Bioinform., 2016

2013

GSATools: analysis of allosteric communication and functional local motions using a structural alphabet.

Alessandro Pandini, Arianna Fornili, Franca Fraternali, Jens Kleinjung

Bioinform., 2013

2008

Multi-Scale Simulations Provide Supporting Evidence for the Hypothesis of Intramolecular Protein Translocation in GroEL/GroES Complexes.

Ivan Coluzza, Alfonso De Simone, Franca Fraternali, Daan Frenkel

PLoS Comput. Biol., 2008

2007

MinSet: a general approach to derive maximally representative database subsets by using fragment dictionaries and its application to the SCOP database.

Alessandro Pandini, Laura Bonati, Franca Fraternali, Jens Kleinjung

Bioinform., 2007

2005

POPSCOMP: an automated interaction analysis of biomolecular complexes.

Jens Kleinjung, Franca Fraternali

Nucleic Acids Res., 2005

2003

POPS: a fast algorithm for solvent accessible surface areas at atomic and residue level.

Luigi Cavallo, Jens Kleinjung, Franca Fraternali

Nucleic Acids Res., 2003

2002

Parameter optimized surfaces (POPS): analysis of key interactions and conformational changes in the ribosome.

Franca Fraternali, Luigi Cavallo

Nucleic Acids Res., 2002