Fidel Ramírez

According to our database, Fidel Ramírez authored at least 11 papers between 2007 and 2021.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2021

pyGenomeTracks: reproducible plots for multivariate genomic datasets.

Lucille Lopez-Delisle, Leily Rabbani, Joachim Wolff, Vivek Bhardwaj, Rolf Backofen, Björn A. Grüning, Fidel Ramírez, Thomas Manke

Bioinform., 2021

2018

Galaxy HiCExplorer: a web server for reproducible Hi-C data analysis, quality control and visualization.

Joachim Wolff, Vivek Bhardwaj, Stephan Nothjunge, Gautier Richard, Gina Renschler, Ralf Gilsbach, Thomas Manke, Rolf Backofen, Fidel Ramírez, Björn A. Grüning

Nucleic Acids Res., 2018

2016

deepTools2: a next generation web server for deep-sequencing data analysis.

Fidel Ramírez, Devon Patrick Ryan, Björn A. Grüning, Vivek Bhardwaj, Fabian Kilpert, Andreas S. Richter, Steffen Heyne, Friederike Dündar, Thomas Manke

Nucleic Acids Res., 2016

2014

deepTools: a flexible platform for exploring deep-sequencing data.

Fidel Ramírez, Friederike Dündar, Sarah Diehl, Björn A. Grüning, Thomas Manke

Nucleic Acids Res., 2014

2012

Novel search method for the discovery of functional relationships.

Fidel Ramírez, Glenn Lawyer, Mario Albrecht

Bioinform., 2012

2011

Novel approaches to the integration and analysis of systems biology data.

Fidel Ramírez

PhD thesis, 2011

2009

DASMIweb: online integration, analysis and assessment of distributed protein interaction data.

Hagen Blankenburg, Fidel Ramírez, Joachim Büch, Mario Albrecht

Nucleic Acids Res., 2009

DASMI: exchanging, annotating and assessing molecular interaction data.

Hagen Blankenburg, Robert D. Finn, Andreas Prlic, Andrew M. Jenkinson, Fidel Ramírez, Dorothea Emig, Sven-Eric Schelhorn, Joachim Büch, Thomas Lengauer, Mario Albrecht

Bioinform., 2009

2008

Computing topological parameters of biological networks.

Yassen Assenov, Fidel Ramírez, Sven-Eric Schelhorn, Thomas Lengauer, Mario Albrecht

Bioinform., 2008

Applications of semantic similarity measures.

Andreas Schlicker, Fidel Ramírez, Jörg Rahnenführer, Carola Huthmacher, Alejandro Pironti, Francisco S. Domingues, Thomas Lengauer, Mario Albrecht

Proceedings of the Ontologies and Text Mining for Life Sciences: Current Status and Future Perspectives, 24.03., 2008

2007

Functional evaluation of domain-domain interactions and human protein interaction networks.

Andreas Schlicker, Carola Huthmacher, Fidel Ramírez, Thomas Lengauer, Mario Albrecht

Bioinform., 2007