Federico Zambelli

Orcid: 0000-0003-3487-4331

According to our database1, Federico Zambelli authored at least 21 papers between 2006 and 2023.

Collaborative distances:
  • Dijkstra number2 of four.
  • Erdős number3 of four.

Timeline

Legend:

Book 
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Article 
PhD thesis 
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Links

Online presence:

On csauthors.net:

Bibliography

2023
UTRdb 2.0: a comprehensive, expert curated catalog of eukaryotic mRNAs untranslated regions.
Nucleic Acids Res., January, 2023

2022
The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2022 update.
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Nucleic Acids Res., 2022

The Laniakea Dashboard and Storage Encryption Components: A Foundation for Developing On-Demand Cloud Services for Life Science.
Proceedings of the Current Trends in Web Engineering, 2022

2021
Laniakea@ReCaS: exploring the potential of customisable Galaxy on-demand instances as a cloud-based service.
BMC Bioinform., 2021

CorGAT: a tool for the functional annotation of SARS-CoV-2 genomes.
Bioinform., 2021

VINYL: Variant prIoritizatioN bY survivaL analysis.
Bioinform., 2021

Next generation sequencing of SARS-CoV-2 genomes: challenges, applications and opportunities.
Briefings Bioinform., 2021

2020
ELIXIR-IT HPC@CINECA: high performance computing resources for the bioinformatics community.
BMC Bioinform., 2020

Critical assessment of bioinformatics methods for the characterization of pathological repeat expansions with single-molecule sequencing data.
Briefings Bioinform., 2020

2018
INDIGO-DataCloud: a Platform to Facilitate Seamless Access to E-Infrastructures.
J. Grid Comput., 2018

2016
Tools and data services registry: a community effort to document bioinformatics resources.
Nucleic Acids Res., 2016

2013
PscanChIP: finding over-represented transcription factor-binding site motifs and their correlations in sequences from ChIP-Seq experiments.
Nucleic Acids Res., 2013

SpliceAid-F: a database of human splicing factors and their RNA-binding sites.
Nucleic Acids Res., 2013

Motif discovery and transcription factor binding sites before and after the next-generation sequencing era.
Briefings Bioinform., 2013

2012
Cscan: finding common regulators of a set of genes by using a collection of genome-wide ChIP-seq datasets.
Nucleic Acids Res., 2012

2011
ASPicDB: a database of annotated transcript and protein variants generated by alternative splicing.
Nucleic Acids Res., 2011

A Faster Algorithm for Motif Finding in Sequences from ChIP-Seq Data.
Proceedings of the Computational Intelligence Methods for Bioinformatics and Biostatistics, 2011

2009
Pscan: finding over-represented transcription factor binding site motifs in sequences from co-regulated or co-expressed genes.
Nucleic Acids Res., 2009

2007
WeederH: an algorithm for finding conserved regulatory motifs and regions in homologous sequences.
BMC Bioinform., 2007

Prediction of over Represented Transcription Factor Binding Sites in Co-regulated Genes Using Whole Genome Matching Statistics.
Proceedings of the Applications of Fuzzy Sets Theory, 2007

2006
MoD Tools: regulatory motif discovery in nucleotide sequences from co-regulated or homologous genes.
Nucleic Acids Res., 2006


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