Overview of DrugProt task at BioCreative VII: data and methods for large-scale text mining and knowledge graph generation of heterogenous chemical-protein relations.

[BibT_eX]

[DOI]

Antonio Miranda-Escalada

Farrokh Mehryary

Jouni Luoma

Darryl Estrada-Zavala

Database J. Biol. Databases Curation, 2023

2022

Neural Network and Random Forest Models in Protein Function Prediction.

[BibT_eX]

[DOI]

IEEE ACM Trans. Comput. Biol. Bioinform., 2022

2020

Entity-Pair Embeddings for Improving Relation Extraction in the Biomedical Domain.

[BibT_eX]

[DOI]

Proceedings of the 28th European Symposium on Artificial Neural Networks, 2020

2018

Data and systems for medication-related text classification and concept normalization from Twitter: insights from the Social Media Mining for Health (SMM4H)-2017 shared task.

[BibT_eX]

[DOI]

Graciela Gonzalez-Hernandez

J. Am. Medical Informatics Assoc., 2018

Potent pairing: ensemble of long short-term memory networks and support vector machine for chemical-protein relation extraction.

[BibT_eX]

[DOI]

Database J. Biol. Databases Curation, 2018

2017

Detecting mentions of pain and acute confusion in Finnish clinical text.

[BibT_eX]

[DOI]

Proceedings of the BioNLP 2017, Vancouver, Canada, August 4, 2017, 2017

End-to-End System for Bacteria Habitat Extraction.

[BibT_eX]

[DOI]

Proceedings of the BioNLP 2017, Vancouver, Canada, August 4, 2017, 2017

Ensemble of Convolutional Neural Networks for Medicine Intake Recognition in Twitter.

[BibT_eX]

[DOI]

Proceedings of the 2nd Social Media Mining for Health Research and Applications Workshop co-located with the American Medical Informatics Association Annual Symposium (AMIA 2017), 2017

2016

Filtering large-scale event collections using a combination of supervised and unsupervised learning for event trigger classification.

[BibT_eX]

[DOI]

J. Biomed. Semant., 2016

Deep Learning with Minimal Training Data: TurkuNLP Entry in the BioNLP Shared Task 2016.

[BibT_eX]

[DOI]