Eytan Ruppin
Orcid: 0000-0002-7862-3940Affiliations:
- Tel Aviv University, Blavatnik School of Computer Science, Israel
According to our database1,
Eytan Ruppin
authored at least 118 papers
between 1990 and 2024.
Collaborative distances:
Collaborative distances:
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Bibliography
2024
Reusability report: Leveraging supervised learning to uncover phenotype-relevant biology from single-cell RNA sequencing data.
Nat. Mac. Intell., 2024
2023
A SSIM Guided cGAN Architecture For Clinically Driven Generative Image Synthesis of Multiplexed Spatial Proteomics Channels.
Proceedings of the IEEE Conference on Computational Intelligence in Bioinformatics and Computational Biology, 2023
2022
A SSIM Guided cGAN Architecture For Clinically Driven Generative Image Synthesis of Multiplexed Spatial Proteomics Channels.
CoRR, 2022
2017
PLoS Comput. Biol., 2017
2016
Systems-Wide Prediction of Enzyme Promiscuity Reveals a New Underground Alternative Route for Pyridoxal 5'-Phosphate Production in <i>E</i>. <i>coli</i>.
PLoS Comput. Biol., 2016
PLoS Comput. Biol., 2016
2014
A Novel Nutritional Predictor Links Microbial Fastidiousness with Lowered Ubiquity, Growth Rate, and Cooperativeness.
PLoS Comput. Biol., 2014
2012
Enhancing the Prioritization of Disease-Causing Genes through Tissue Specific Protein Interaction Networks.
PLoS Comput. Biol., 2012
J. Comput. Biol., 2012
2011
PLoS Comput. Biol., 2011
Genome-Scale Metabolic Modeling Elucidates the Role of Proliferative Adaptation in Causing the Warburg Effect.
PLoS Comput. Biol., 2011
PLoS Comput. Biol., 2011
J. Comput. Biol., 2011
Bioinform., 2011
Proceedings of the Research in Computational Molecular Biology, 2011
2010
PLoS Comput. Biol., 2010
Decoupling Environment-Dependent and Independent Genetic Robustness across Bacterial Species.
PLoS Comput. Biol., 2010
MuD: an interactive web server for the prediction of non-neutral substitutions using protein structural data.
Nucleic Acids Res., 2010
Reconstructing Ancestral Genomic Sequences by Co-Evolution: Formal Definitions, Computational Issues, and Biological Examples.
J. Comput. Biol., 2010
Integrating quantitative proteomics and metabolomics with a genome-scale metabolic network model.
Bioinform., 2010
2009
J. Comput. Biol., 2009
Bioinform., 2009
Co-evolutionary Models for Reconstructing Ancestral Genomic Sequences: Computational Issues and Biological Examples.
Proceedings of the Comparative Genomics, International Workshop, 2009
2008
Proceedings of the Protein-protein Interactions and Networks: Identification, 2008
2007
Determinants of Protein Abundance and Translation Efficiency in <i>S. cerevisiae</i>.
PLoS Comput. Biol., 2007
Evolutionary conservation and over-representation of functionally enriched network patterns in the yeast regulatory network.
BMC Syst. Biol., 2007
A supervised approach for identifying discriminating genotype patterns and its application to breast cancer data.
Bioinform., 2007
Constraint-based functional similarity of metabolic genes: going beyond network topology.
Bioinform., 2007
Proceedings of the Proceedings 15th International Conference on Intelligent Systems for Molecular Biology (ISMB) & 6th European Conference on Computational Biology (ECCB), 2007
SPINE: a framework for signaling-regulatory pathway inference from cause-effect experiments.
Proceedings of the Proceedings 15th International Conference on Intelligent Systems for Molecular Biology (ISMB) & 6th European Conference on Computational Biology (ECCB), 2007
2006
Gene Expression of <i>Caenorhabditis elegans</i> Neurons Carries Information on Their Synaptic Connectivity.
PLoS Comput. Biol., 2006
Conservation of Expression and Sequence of Metabolic Genes Is Reflected by Activity Across Metabolic States.
PLoS Comput. Biol., 2006
BMC Bioinform., 2006
BMC Bioinform., 2006
Artif. Life, 2006
Proceedings of the Algorithms in Bioinformatics, 6th International Workshop, 2006
Proceedings of the Advances in Neural Information Processing Systems 19, 2006
Proceedings of the Proceedings 14th International Conference on Intelligent Systems for Molecular Biology 2006, 2006
2005
PLoS Comput. Biol., 2005
Cogn. Syst. Res., 2005
Proceedings of the Systems Biology and Regulatory Genomics, 2005
Proceedings of the IJCAI-05, Proceedings of the Nineteenth International Joint Conference on Artificial Intelligence, Edinburgh, Scotland, UK, July 30, 2005
Proceedings of the Fourth International IEEE Computer Society Computational Systems Bioinformatics Conference, 2005
2004
Neural Comput., 2004
Neurocomputing, 2004
Neurocomputing, 2004
Proceedings of the 3rd International IEEE Computer Society Computational Systems Bioinformatics Conference, 2004
2003
Artif. Life, 2003
Proceedings of the Advances in Neural Information Processing Systems 16 [Neural Information Processing Systems, 2003
Proceedings of the Advances in Artificial Life, 7th European Conference, 2003
Proceedings of the Advances in Artificial Life, 7th European Conference, 2003
Proceedings of the Advances in Artificial Life, 7th European Conference, 2003
2002
Actor-critic models of the basal ganglia: new anatomical and computational perspectives.
Neural Networks, 2002
Evolution of reinforcement learning in foraging bees: a simple explanation for risk averse behavior.
Neurocomputing, 2002
Evolution of Reinforcement Learning in Uncertain Environments: A Simple Explanation for Complex Foraging Behaviors.
Adapt. Behav., 2002
Proceedings of the Advances in Neural Information Processing Systems 15 [Neural Information Processing Systems, 2002
2001
Neural Comput., 2001
Neural Comput., 2001
Evolution of Reinforcement Learning in Uncertain Environments: Emergence of Risk-Aversion and Matching.
Proceedings of the Advances in Artificial Life, 6th European Conference, 2001
Proceedings of the Advances in Artificial Life, 6th European Conference, 2001
2000
Global vs. local processing of compressed representations: A computational model of visual search.
Neurocomputing, 2000
Neuronal normalization provides effective learning through ineffective synaptic learning rules.
Neurocomputing, 2000
Proceedings of the Advances in Neural Information Processing Systems 13, 2000
1999
Neural Comput., 1999
Neurocomputing, 1999
Neuronal regulation: A biologically plausible mechanism for efficient synaptic pruning in development.
Neurocomputing, 1999
Comput. Biol. Medicine, 1999
Proceedings of the Advances in Neural Information Processing Systems 12, [NIPS Conference, Denver, Colorado, USA, November 29, 1999
Proceedings of the Advances in Neural Information Processing Systems 12, [NIPS Conference, Denver, Colorado, USA, November 29, 1999
Spontaneous Evolution of Command Neurons, Place Cells and Memory Mechanisms in Autonomous Agents.
Proceedings of the Advances in Artificial Life, 5th European Conference, 1999
1998
Neural Comput., 1998
Seeking order in disorder: computational studies of neurologic and psychiatric diseases.
Artif. Intell. Medicine, 1998
Proceedings of the Advances in Neural Information Processing Systems 11, [NIPS Conference, Denver, Colorado, USA, November 30, 1998
Proceedings of the Algorithms and Architectures., 1998
1997
Proceedings of the Advances in Neural Information Processing Systems 10, 1997
Proceedings of the Advances in Neural Information Processing Systems 10, 1997
1996
Neural Comput., 1996
Frequency-Spatial Transformation: A Proposal for Parsimonious Intra-Cortical Communication.
Int. J. Neural Syst., 1996
Biol. Cybern., 1996
Proceedings of 1996 IEEE International Conference on Evolutionary Computation, 1996
1995
Neural Comput., 1995
Neural Comput., 1995
1994
Proceedings of the Advances in Neural Information Processing Systems 7, 1994
Proceedings of the Advances in Neural Information Processing Systems 7, 1994
1993
PhD thesis, 1993
Neural Comput., 1993
Examining the volume efficiency of the cortical architecture in a multi-processor network model.
Biol. Cybern., 1993
Proceedings of the Advances in Neural Information Processing Systems 6, 1993
1992
Proceedings of the Advances in Neural Information Processing Systems 5, [NIPS Conference, Denver, Colorado, USA, November 30, 1992
Proceedings of the Advances in Neural Information Processing Systems 5, [NIPS Conference, Denver, Colorado, USA, November 30, 1992
1990
Proceedings of the Advances in Neural Information Processing Systems 3, 1990
Proceedings of the IJCNN 1990, 1990