Eve Syrkin Wurtele

According to our database, Eve Syrkin Wurtele authored at least 23 papers between 2002 and 2022.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2022

rmonad: pipelines you can compute on.

Zebulun Arendsee, Jennifer Chang, Eve Syrkin Wurtele

R J., 2022

2021

orfipy: a fast and flexible tool for extracting ORFs.

Urminder Singh, Eve Syrkin Wurtele

Bioinform., 2021

2019

fagin: synteny-based phylostratigraphy and finer classification of young genes.

Zebulun Arendsee, Jing Li, Urminder Singh, Priyanka Bhandary, Arun S. Seetharam, Eve Syrkin Wurtele

BMC Bioinform., 2019

phylostratr: a framework for phylostratigraphy.

Zebulun Arendsee, Jing Li, Urminder Singh, Arun S. Seetharam, Karin S. Dorman, Eve Syrkin Wurtele

Bioinform., 2019

2013

Automatic extraction of biomolecular interactions: an empirical approach.

Lifeng Zhang, Daniel Berleant, Jing Ding, Eve Syrkin Wurtele

BMC Bioinform., 2013

Comprehensive analysis of correlation coefficients estimated from pooling heterogeneous microarray data.

Márcia M. Almeida-de-Macedo, Nick Ransom, Yaping Feng, Jonathan Hurst, Eve Syrkin Wurtele

BMC Bioinform., 2013

2012

BirdsEyeView (BEV): graphical overviews of experimental data.

Lifeng Zhang, Daniel Berleant, Yi Wang, Ling Li, Diane J. Cook, Eve Syrkin Wurtele

BMC Bioinform., 2012

MetNet Online: a novel integrated resource for plant systems biology.

Yves Sucaet, Yi Wang, Jie Li, Eve Syrkin Wurtele

BMC Bioinform., 2012

Meta!Blast computer game: a pipeline from science to 3D art to education.

William Schneller, P. J. Campbell, Diane Bassham, Eve Syrkin Wurtele

Proceedings of the Engineering Reality of Virtual Reality 2012, 2012

2010

MetNetGE: interactive views of biological networks and ontologies.

Ming Jia, Suh-Yeon Choi, Dirk Reiners, Eve Syrkin Wurtele, Julie A. Dickerson

BMC Bioinform., 2010

Visualizing Multivariate Hierarchic Data Using Enhanced Radial Space-Filling Layout.

Ming Jia, Ling Li, Erin Boggess, Eve Syrkin Wurtele, Julie A. Dickerson

Proceedings of the Advances in Visual Computing - 6th International Symposium, 2010

2009

PathBinder - text empirics and automatic extraction of biomolecular interactions.

Lifeng Zhang, Daniel Berleant, Jing Ding, Tuan Cao, Eve Syrkin Wurtele

BMC Bioinform., 2009

Visualization of Gene Regulatory Networks.

Muhieddine El Kaissi, Ming Jia, Dirk Reiners, Julie A. Dickerson, Eve Syrkin Wurtele

Proceedings of the Advances in Visual Computing, 5th International Symposium, 2009

Reaction Centric Layout for Metabolic Networks.

Muhieddine El Kaissi, Ming Jia, Dirk Reiners, Julie A. Dickerson, Eve Syrkin Wurtele

Proceedings of the Advances in Visual Computing, 5th International Symposium, 2009

2007

A tool for comprehensive analysis of protein interaction networks.

Tian Xia, Jie Li, Eve Syrkin Wurtele, Xun Gu

Proceedings of the International Conference on Bioinformatics & Computational Biology, 2007

2006

Identifying differentially expressed genes in unreplicated multiple-treatment microarray timecourse experiments.

Rhonda DeCook, Dan Nettleton, Carol Foster, Eve Syrkin Wurtele

Comput. Stat. Data Anal., 2006

PubMed Assistant: a biologist-friendly interface for enhanced PubMed search.

Jing Ding, Laron M. Hughes, Daniel Berleant, Andy W. Fulmer, Eve Syrkin Wurtele

Bioinform., 2006

Hierarchical visualization of metabolic networks using virtual reality.

Yuting Yang, Eve Syrkin Wurtele, Carolina Cruz-Neira, Julie A. Dickerson

Proceedings of the Proceedings VRCIA 2006 ACM International Conference on Virtual Reality Continuum and its Applications, 2006

2005

Modeling gene expression networks using fuzzy logic.

Pan Du, Jian Gong, Eve Syrkin Wurtele, Julie A. Dickerson

IEEE Trans. Syst. Man Cybern. Part B, 2005

Integration of metabolic networks and gene expression in virtual reality.

Yuting Yang, Levent Engin, Eve Syrkin Wurtele, Carolina Cruz-Neira, Julie A. Dickerson

Bioinform., 2005

Using the biological taxonomy to access biological literature with PathBinderH.

Jing Ding, Karthikeyan Viswanathan, Daniel Berleant, Laron M. Hughes, Eve Syrkin Wurtele, Daniel A. Ashlock, Julie A. Dickerson, Andy W. Fulmer, Patrick S. Schnable

Bioinform., 2005

2003

Creating Metabolic Network Models using Text Mining and Expert Knowledge.

Julie A. Dickerson, Daniel Berleant, Z. Cox, W. Qi, Eve Syrkin Wurtele

Proceedings of the Computational Biology and Genome Informatics, 2003

2002

Mining MEDLINE: Abstracts, Sentences, or Phrases?

Jing Ding, Daniel Berleant, Dan Nettleton, Eve Syrkin Wurtele

Proceedings of the 7th Pacific Symposium on Biocomputing, 2002