Evangelos A. Coutsias

According to our database, Evangelos A. Coutsias authored at least 20 papers between 1996 and 2023.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2023

Numerically stable algorithm for Inverse Kinematics of 6R problem and its applications to macrocycles.

Xin Cao, Mikhail Ignatov, George Jones, Sara N. Pollock, Evangelos A. Coutsias, Dima Kozakov

Proceedings of the 14th ACM International Conference on Bioinformatics, 2023

2021

Kinematic Reconstruction of Cyclic Peptides and Protein Backbones from Partial Data.

Mosavverul Hassan, Evangelos A. Coutsias

J. Chem. Inf. Model., 2021

Protein secondary structure motifs: A kinematic construction.

Mosavverul Hassan, Evangelos A. Coutsias

J. Comput. Chem., 2021

2020

Sampling and refinement protocols for template-based macrocycle docking: 2018 D3R Grand Challenge 4.

Sergei Kotelnikov, Andrey Alekseenko, Cong Liu, Mikhail Ignatov, Dzmitry Padhorny, Emiliano Brini, Mark Lukin, Evangelos A. Coutsias, Ken A. Dill, Dima Kozakov

J. Comput. Aided Mol. Des., 2020

2019

RMSD and Symmetry.

Evangelos A. Coutsias, Michael J. Wester

J. Comput. Chem., 2019

2018

Laguerre-Intersection Method for Implicit Solvation.

Michelle Hatch Hummel, Bihua Yu, Carlos Simmerling, Evangelos A. Coutsias

Int. J. Comput. Geom. Appl., 2018

2017

Characterization of Biomolecular Helices and Their Complementarity Using Geometric Analysis.

Kevin Hauser, Yiqing He, Miguel Garcia-Diaz, Carlos Simmerling, Evangelos A. Coutsias

J. Chem. Inf. Model., 2017

2016

Accurate <i>de novo</i> design of hyperstable constrained peptides.

Gaurav Bhardwaj, Vikram Khipple Mulligan, Christopher D. Bahl, Jason M. Gilmore, Peta J. Harvey, Olivier Cheneval, Garry W. Buchko, Surya V. S. R. K. Pulavarti, Quentin Kaas, Alexander Eletsky, Po-Ssu Huang, William A. Johnsen, Per Greisen, Gabriel J. Rocklin, Yifan Song, Thomas W. Linsky, Andrew M. Watkins, Stephen A. Rettie, Xianzhong Xu, Lauren P. Carter, Richard Bonneau, James M. Olson, Evangelos A. Coutsias, Colin E. Correnti, Thomas Szyperski, David J. Craik, David Baker

Nat., 2016

Flexibility of Bricard's linkages and other structures via resultants and computer algebra.

Robert H. Lewis, Evangelos A. Coutsias

Math. Comput. Simul., 2016

2015

Bricard flexible octahedra and the canonical cyclohexane.

Evangelos A. Coutsias

ACM Commun. Comput. Algebra, 2015

2011

The FALC-Loop web server for protein loop modeling.

Junsu Ko, Dongseon Lee, Hahnbeom Park, Evangelos A. Coutsias, Julian Lee, Chaok Seok

Nucleic Acids Res., 2011

2008

Scaffold Topologies. 2. Analysis of Chemical Databases.

Michael J. Wester, Sara N. Pollock, Evangelos A. Coutsias, Tharun Kumar Allu, Sorel Muresan, Tudor I. Oprea

J. Chem. Inf. Model., 2008

Scaffold Topologies. 1. Exhaustive Enumeration up to Eight Rings.

Sara N. Pollock, Evangelos A. Coutsias, Michael J. Wester, Tudor I. Oprea

J. Chem. Inf. Model., 2008

2006

Spectral element modeling of semiconductor heterostructures.

Gregory von Winckel, Sanjay Krishna, Evangelos A. Coutsias

Math. Comput. Model., 2006

Algorithmic Search for Flexibility Using Resultants of Polynomial Systems.

Robert H. Lewis, Evangelos A. Coutsias

Proceedings of the Automated Deduction in Geometry, 2006

2005

Rotational superposition and least squares: The SVD and quaternions approaches yield identical results. Reply to the preceding comment by G. Kneller.

Evangelos A. Coutsias, Chaok Seok, Ken A. Dill

J. Comput. Chem., 2005

2004

A kinematic view of loop closure.

Evangelos A. Coutsias, Chaok Seok, Matthew P. Jacobson, Ken A. Dill

J. Comput. Chem., 2004

Using quaternions to calculate RMSD.

Evangelos A. Coutsias, Chaok Seok, Ken A. Dill

J. Comput. Chem., 2004

1999

Pseudospectral Solution of the Two-Dimensional Navier-Stokes Equations in a Disk.

David J. Torres, Evangelos A. Coutsias

SIAM J. Sci. Comput., 1999

1996

An efficient spectral method for ordinary differential equations with rational function coefficients.

Evangelos A. Coutsias, Thomas M. Hagstrom, David J. Torres

Math. Comput., 1996