Eugene Kolker

According to our database, Eugene Kolker authored at least 21 papers between 2002 and 2018.

Collaborative distances:

• Dijkstra number of three.
• Erdős number of three.

2018

Data Science Community Matures with Diversity: Conference Observations, Highlights, and Interviews - Strata Data Conference, New York, September 11-13, 2018.

Eugene Kolker

Big Data, 2018

2016

Genic insights from integrated human proteomics in GeneCards.

Simon Fishilevich, Shahar Zimmerman, Asher Kohn, Tsippi Iny Stein, Tsviya Olender, Eugene Kolker, Marilyn Safran, Doron Lancet

Database J. Biol. Databases Curation, 2016

A Case Study: Analyzing City Vitality with Four Pillars of Activity - <i>Live</i>, <i>Work</i>, <i>Shop</i>, and <i>Play</i>.

Matt Griffin, Blake W. Nordstrom, Jon Scholes, Kate Joncas, Patrick Gordon, Elliott Krivenko, Winston Haynes, Roger Higdon, Elizabeth Stewart, Natali Kolker, Elizabeth Montague, Eugene Kolker

Big Data, 2016

2015

Beyond protein expression, MOPED goes multi-omics.

Elizabeth Montague, Imre Janko, Larissa Stanberry, Elaine Lee, John Choiniere, Nathaniel Anderson, Elizabeth Stewart, William Broomall, Roger Higdon, Natali Kolker, Eugene Kolker

Nucleic Acids Res., 2015

2014

Optimizing high performance computing workflow for protein functional annotation.

Larissa Stanberry, Bhanu Rekepalli, Yuan Liu, Paul Giblock, Roger Higdon, Elizabeth Montague, William Broomall, Natali Kolker, Eugene Kolker

Concurr. Comput. Pract. Exp., 2014

Visualizing the Protein Sequence Universe.

Larissa Stanberry, Roger Higdon, Winston Haynes, Natali Kolker, William Broomall, Saliya Ekanayake, Adam Hughes, Yang Ruan, Judy Qiu, Eugene Kolker, Geoffrey C. Fox

Concurr. Comput. Pract. Exp., 2014

Healthcare Analytics: Creating a Prioritized Improvement System with Performance Benchmarking.

Eugene Kolker, Evelyne Kolker

Big Data, 2014

2013

Differential Expression Analysis for Pathways.

Winston A. Haynes, Roger Higdon, Larissa Stanberry, Dwayne Collins, Eugene Kolker

PLoS Comput. Biol., 2013

Delsa Workshop IV: Launching the Quantified Human Initiative.

Elizabeth Stewart, Todd Smith, Andrea De Souza, Jack Faris, Lennart Martens, Sophie Mohin, Vural Özdemir, Courtney MacNealy-Koch, Eugene Kolker

Big Data, 2013

Metadata Checklist for the Integrated Personal Omics Study: <i>Proteomics and Metabolomics Experiments</i>.

Michael Snyder, George Mias, Larissa Stanberry, Eugene Kolker

Big Data, 2013

Toward More Transparent and Reproducible Omics Studies Through a Common Metadata Checklist and Data Publications.

Eugene Kolker, Vural Özdemir, Lennart Martens, William Hancock, Gordon A. Anderson, Nathaniel Anderson, Sukru Aynacioglu, Ancha V. Baranova, Shawn R. Campagna, Rui Chen, John Choiniere, Stephen P. Dearth, Wu-Chun Feng, Lynnette Ferguson, Geoffrey C. Fox, Dmitrij Frishman, Robert Grossman, Allison P. Heath, Roger Higdon, Mara H. Hutz, Imre Janko, Lihua Jiang, Sanjay Joshi, Alexander E. Kel, Joseph W. Kemnitz, Isaac S. Kohane, Natali Kolker, Doron Lancet, Elaine Lee, Weizhong Li, Andrey Lisitsa, Adrian Llerena, Courtney MacNealy-Koch, Jean-Claude Marshall, Paola Masuzzo, Amanda May, George Mias, Matthew E. Monroe, Elizabeth Montague, Sean D. Mooney, Alexey I. Nesvizhskii, Santosh Noronha, Gilbert S. Omenn, Harsha Rajasimha, Preveen Ramamoorthy, Jerry Sheehan, Larry Smarr, Charles V. Smith, Todd Smith, Michael Snyder, Srikanth Rapole, Sanjeeva Srivastava, Larissa Stanberry, Elizabeth Stewart, Stefano Toppo, Peter Uetz, Kenneth Verheggen, Brynn H. Voy, Louise Warnich, Steven W. Wilhelm, Gregory Yandl

Big Data, 2013

Predictive Analytics In Healthcare: <i>Medications as a Predictor of Medical Complexity</i>.

Roger Higdon, Elizabeth Stewart, Jared C. Roach, Caroline Dombrowski, Larissa Stanberry, Holly Clifton, Natali Kolker, Gerald van Belle, Mark A. Del Beccaro, Eugene Kolker

Big Data, 2013

Unraveling the Complexities of Life Sciences Data.

Roger Higdon, Winston Haynes, Larissa Stanberry, Elizabeth Stewart, Gregory Yandl, Chris Howard, William Broomall, Natali Kolker, Eugene Kolker

Big Data, 2013

Introducing a Metadata Checklist for Omics Data.

Edd Dumbill, Eugene Kolker

Big Data, 2013

2012

MOPED: Model Organism Protein Expression Database.

Eugene Kolker, Roger Higdon, Winston Haynes, Dean Welch, William Broomall, Doron Lancet, Larissa Stanberry, Natali Kolker

Nucleic Acids Res., 2012

2010

The necessity of adjusting tests of protein category enrichment in discovery proteomics.

Brenton Louie, Roger Higdon, Eugene Kolker

Bioinform., 2010

Modeling sequence and function similarity between proteins for protein functional annotation.

Roger Higdon, Brenton Louie, Eugene Kolker

Proceedings of the 19th ACM International Symposium on High Performance Distributed Computing, 2010

2008

A note on the false discovery rate and inconsistent comparisons between experiments.

Roger Higdon, Gerald van Belle, Eugene Kolker

Bioinform., 2008

2007

A predictive model for identifying proteins by a single peptide match.

Roger Higdon, Eugene Kolker

Bioinform., 2007

2005

Integration of Data for Gene Annotation Using the BioMediator System.

Brenton Louie, Peter Mork, Ron Shaker, Natali Kolker, Eugene Kolker, Peter Tarczy-Hornoch

Proceedings of the AMIA 2005, 2005

2002

Identifying operons and untranslated regions of transcripts using Escherichia coli RNA expression analysis.

Brian Tjaden, David R. Haynor, Sergey Stolyar, Carsten Rosenow, Eugene Kolker

Proceedings of the Tenth International Conference on Intelligent Systems for Molecular Biology, 2002