Eroma Abeysinghe

According to our database, Eroma Abeysinghe authored at least 34 papers between 2016 and 2024.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2024

Python/NEURON code for simulating biophysically realistic thalamocortical dynamics during sleep.

Christian G. Fink, Pavel Sanda, Logan Bayer, Eroma Abeysinghe, Maxim Bazhenov, Giri P. Krishnan

Softw. Impacts, 2024

Enhancing Research Productivity: Seamless Integration of Personal Devices and HPC Resources with the Cybershuttle Notebook Gateway.

Yasith Jayawardana, Dimuthu Wannipurage, Eroma Abeysinghe, Suresh Marru

Proceedings of the Practice and Experience in Advanced Research Computing 2024: Human Powered Computing, 2024

2023

Airavata Metascheduler: A Reliable, Fault Tolerant, and Resource-Aware Job Scheduling Service.

Isuru Ranawaka, Eroma Abeysinghe, Dimuthu Wannipurage, Dinuka De Silva, Emre H. Brookes, Suresh Marru, Marcus Christie, Sudhakar Pamidighantam, Marlon E. Pierce

Proceedings of the Practice and Experience in Advanced Research Computing, 2023

Cybershuttle: An End-to-End Cyberinfrastructure Continuum to Accelerate Discovery in Science and Engineering.

Suresh Marru, Marlon E. Pierce, Beth Plale, Sudhakar Pamidighantam, Dimuthu Wannipurage, Marcus Christie, Isuru Ranawaka, Eroma Abeysinghe, Rob Quick, Emad Tajkhorshid, Seid Koric, Jim Basney, Mariano Spivak, Barry Isralewitz, Rafael C. Bernardi, Diego Enry Barreto Gomes, Giri P. Krishnan, Maxim Bazhenov, Shava Smallen, Amit Majumdar, Anton Arkhipov, Kael Dai, Xiao-Ping Liu, Kenneth Yoshimoto

Proceedings of the Practice and Experience in Advanced Research Computing, 2023

Defining a Cyberinfrastructure for Plasma Science and Space Weather Simulations.

Eroma Abeysinghe, Cameron W. Smith, Liang Wang, James Juno, Matthew Mccall, Marlon E. Pierce, Mark S. Shephard

Proceedings of the Practice and Experience in Advanced Research Computing, 2023

2022

Experiences with managing data parallel computational workflows for High-throughput Fragment Molecular Orbital (FMO) Calculations.

Dimuthu Wannipurage, Indrajit Deb, Eroma Abeysinghe, Sudhakar Pamidighantam, Suresh Marru, Marlon E. Pierce, Aaron T. Frank

CoRR, 2022

SimVascular Gateway for Education and Research.

Justin Tran, Eroma Abeysinghe, John F. LaDisa Jr., Alison L. Marsden, Marlon E. Pierce

Proceedings of the PEARC '22: Practice and Experience in Advanced Research Computing, Boston, MA, USA, July 10, 2022

Building the RNAMake Gateway on PATh: a Student-Led Design Project.

Dinuka De Silva, Derek Weitzel, Joseph Yesselman, Marcus Christie, Robert Quick, Eroma Abeysinghe, Marlon E. Pierce

Proceedings of the PEARC '22: Practice and Experience in Advanced Research Computing, Boston, MA, USA, July 10, 2022

2021

A Multi-Protocol, Secure, and Dynamic Data Storage Integration Frameworkfor Multi-tenanted Science Gateway Middleware.

Dimuthu Wannipurage, Isuru Ranawaka, Eroma Abeysinghe, Marcus Christie, Suresh Marru, Marlon E. Pierce

CoRR, 2021

User-Centric Design and Evolvable Architecture for Science Gateways: A Case Study.

Suresh Marru, Tanya Kuruvilla, Eroma Abeysinghe, Donald F. McMullen, Marlon E. Pierce, David Gene Morgan, Steven L. Tait, Roger W. Innes

Proceedings of the 21st IEEE/ACM International Symposium on Cluster, 2021

2020

Managing authentication and authorization in distributed science gateway middleware.

Marcus A. Christie, Anuj Bhandar, Supun Nakandala, Suresh Marru, Eroma Abeysinghe, Sudhakar Pamidighantam, Marlon E. Pierce

Future Gener. Comput. Syst., 2020

A Science Gateway for Simulating the Economics of Carbon Sequestration Technologies: SimCCS2.0.

Sudhakar Pamidighantam, Jun Wang, Marcus Christie, Eroma Abeysinghe, Kevin M. Ellett, Ryan Kammer, Sean Yaw, Richard S. Middleton, Brendan A. Hoover

Proceedings of the PEARC '20: Practice and Experience in Advanced Research Computing, 2020

Online Single-cell RNA-seq Data Denoising with Transfer Learning.

Bowei Kang, Eroma Abeysinghe, Divyansh Agarwal, Quanli Wang, Sudhakar Pamidighantam, Mo Huang, Nancy Ruonan Zhang, Jingshu Wang

Proceedings of the PEARC '20: Practice and Experience in Advanced Research Computing, 2020

FutureWater Indiana: A science gateway for spatio-temporal modeling of water in Wabash basin with a focus on climate change.

Jennifer R. Dierauer, Chen Zhu, Lei Gong, Alan Walsh, Sudhakar Pamidighantam, Jun Wang, Marcus Christie, Eroma Abeysinghe

Proceedings of the PEARC '20: Practice and Experience in Advanced Research Computing, 2020

An extensible Django-based web portal for Apache Airavata.

Marcus Christie, Suresh Marru, Eroma Abeysinghe, Dimuthu Upeksha, Sudhakar Pamidighantam, Stephen Paul Adithela, Eldho Mathulla, Aarushi Bisht, Shivam Rastogi, Marlon E. Pierce

Proceedings of the PEARC '20: Practice and Experience in Advanced Research Computing, 2020

TopPIC Gateway: A Web Gateway for Top-Down Mass Spectrometry Data Interpretation.

In Kwon Choi, Eroma Abeysinghe, Eric Coulter, Suresh Marru, Marlon E. Pierce, Xiaowen Liu

Proceedings of the PEARC '20: Practice and Experience in Advanced Research Computing, 2020

2019

Implementing a Flexible, Fault Tolerant Job Management System for Science Gateways.

Dimuthu Wannipurage, Suresh Marru, Marlon E. Pierce, Eroma Abeysinghe, Sudhakar Pamidighantam, Marcus Christie, Gourav Shenoy, Ajinkya Dhamnaskar, Lahiru Jayathilaka

Proceedings of the Practice and Experience in Advanced Research Computing on Rise of the Machines (learning), 2019

The Distant Reader: Tool for Reading.

Eric Lease Morgan, Eroma Abeysinghe, Sudhakar Pamidighantam, Eric Coulter, Suresh Marru, Marlon E. Pierce

Proceedings of the Practice and Experience in Advanced Research Computing on Rise of the Machines (learning), 2019

Experiences from scaling scale Science Gateway operations.

Suresh Marru, Marlon E. Pierce, Eroma Abeysinghe, Sudhakar Pamidighantam, Marcus Christie, Dimuthu Wannipurage

Proceedings of the Practice and Experience in Advanced Research Computing on Rise of the Machines (learning), 2019

The USD Science Gateway: A Bridge Between Research and Advanced Computing.

Adison A. Kleinsasser, Sudhakar Pamidighantam, Douglas M. Jennewein, Joseph D. Madison, Marcus Christie, Eroma Abeysinghe, Suresh Marru, Marlon E. Pierce

Proceedings of the Practice and Experience in Advanced Research Computing on Rise of the Machines (learning), 2019

InterACTWEL Science Gateway for Adaptation Planning in Food-Energy-Water Sectors of Local Communities.

Meghna Babbar-Sebens, Samuel J. Rivera, Eroma Abeysinghe, Suresh Marru, Marlon E. Pierce, Eric Coulter, Majid Farahani, Dimuthu Wannipurage, Marcus Christie

Proceedings of the Practice and Experience in Advanced Research Computing on Rise of the Machines (learning), 2019

LSU Computational System Biology Gateway for Education.

Eroma Abeysinghe, Michal Brylinski, Marcus Christie, Suresh Marru, Marlon E. Pierce

Proceedings of the Practice and Experience in Advanced Research Computing on Rise of the Machines (learning), 2019

2018

Using a Science Gateway to Deliver SimVascular Software as a Service for Classroom Instruction.

Nathan M. Wilson, Suresh Marru, Eroma Abeysinghe, Marcus A. Christie, Gabriel D. Maher, Adam R. Updegrove, Marlon E. Pierce, Alison L. Marsden

Proceedings of the Practice and Experience on Advanced Research Computing, 2018

A New Science Gateway to Provide Decision Support on Carbon Capture and Storage Technologies.

Yinzhi Wang, Sudhakar Pamidighantam, Sean Yaw, Eroma Abeysinghe, Suresh Marru, Marcus Christie, Kevin M. Ellett, Marlon E. Pierce, Richard S. Middleton

Proceedings of the Practice and Experience on Advanced Research Computing, 2018

Building a Science Gateway For Processing and Modeling Sequencing Data Via Apache Airavata.

Zhong Wang, Marcus A. Christie, Eroma Abeysinghe, Tinyi Chu, Suresh Marru, Marlon E. Pierce, Charles G. Danko

Proceedings of the Practice and Experience on Advanced Research Computing, 2018

Simplifying Access to Campus Resources at Southern Illinois University with a Science Gateway.

Sai Susheel Sunkara, Chet Langin, Marlon E. Pierce, Eroma Abeysinghe, Sudhakar Pamidighantam, Suresh Marru

Proceedings of the Practice and Experience on Advanced Research Computing, 2018

PHASTA Science Gateway for High Performance Computational Fluid Dynamics.

Cameron W. Smith, Eroma Abeysinghe, Suresh Marru, Kenneth E. Jansen

Proceedings of the Practice and Experience on Advanced Research Computing, 2018

Supporting Science Gateways Using Apache Airavata and SciGaP Services.

Marlon E. Pierce, Suresh Marru, Eroma Abeysinghe, Sudhakar Pamidighantam, Marcus Christie, Dimuthu Wannipurage

Proceedings of the Practice and Experience on Advanced Research Computing, 2018

Science Gateway Implementation at the University of South Dakota: Applications in Research and Education.

Joseph D. Madison, Eroma Abeysinghe, Sudhakar Pamidighantam, Suresh Marru, Marcus Christie, Douglas M. Jennewein, Marlon E. Pierce

Proceedings of the Practice and Experience on Advanced Research Computing, 2018

Searching the Sequence Read Archive using Jetstream and Wrangler.

Kyle Levi, Mats Rynge, Eroma Abeysinghe, Robert A. Edwards

Proceedings of the Practice and Experience on Advanced Research Computing, 2018

The CSBG - LSU Gateway: Web based Hosted Gateway for Computational System Biology Application Tools from Louisiana State University.

Eroma Abeysinghe, Michal Brylinski, Marcus Christie, Suresh Marru, Marlon E. Pierce

Proceedings of the Practice and Experience on Advanced Research Computing, 2018

2017

The PHASTA Science Gateway: Web-based Execution of Adaptive Computational Fluid Dynamics Simulations.

Cameron W. Smith, Eroma Abeysinghe

Proceedings of the Practice and Experience in Advanced Research Computing 2017: Sustainability, 2017

2016

Anatomy of the SEAGrid Science Gateway.

Supun Nakandala, Sudhakar Pamidighantam, Shameera Yodage, Nipurn Doshi, Eroma Abeysinghe, Chathuri Peli Kankanamalage, Suresh Marru, Marlon E. Pierce

Proceedings of the XSEDE16 Conference on Diversity, 2016

Community Science Exemplars in SEAGrid Science Gateway: Apache Airavata Based Implementation of Advanced Infrastructure.

Sudhakar Pamidighantam, Supun Nakandala, Eroma Abeysinghe, Chathuri Wimalasena, Shameera Rathnayaka, Suresh Marru, Marlon E. Pierce

Proceedings of the International Conference on Computational Science 2016, 2016