Eric Y. Chuang

According to our database, Eric Y. Chuang authored at least 33 papers between 2004 and 2024.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2024

NURECON: A Novel Online System for Determining Nutrition Requirements Based on Microbial Composition.

Zhao-Qi Hu, Yuan-Mao Hung, Li-Han Chen, Liang-Chuan Lai, Min-Hsiung Pan, Eric Y. Chuang, Mong-Hsun Tsai

IEEE ACM Trans. Comput. Biol. Bioinform., 2024

2023

Multi-ethnic Imputation System (MI-System): A genotype imputation server for high-dimensional data.

Amrita Chattopadhyay, Chien-Yueh Lee, Ying-Cheng Shen, Kuan-Chen Lu, Tzu-Hung Hsiao, Ching-Heng Lin, Liang-Chuan Lai, Mong-Hsun Tsai, Tzu-Pin Lu, Eric Y. Chuang

J. Biomed. Informatics, 2023

2022

16S-ITGDB: An Integrated Database for Improving Species Classification of Prokaryotic 16S Ribosomal RNA Sequences.

Yu-Peng Hsieh, Yuan-Mao Hung, Mong-Hsun Tsai, Liang-Chuan Lai, Eric Y. Chuang

Frontiers Bioinform., 2022

To compare the performance of prokaryotic taxonomy classifiers using curated 16S full-length rRNA sequences.

Yuan-Mao Hung, Wei-Ni Lyu, Ming-Lin Tsai, Chiang-Lin Liu, Liang-Chuan Lai, Mong-Hsun Tsai, Eric Y. Chuang

Comput. Biol. Medicine, 2022

CLIN_SKAT: an R package to conduct association analysis using functionally relevant variants.

Amrita Chattopadhyay, Ching-Yu Shih, Yu-Chen Hsu, Jyh-Ming Jimmy Juang, Eric Y. Chuang, Tzu-Pin Lu

BMC Bioinform., 2022

Join Classifier of Type and Index Mutation on Lung Cancer DNA Using Sequential Labeling Model.

Untari Novia Wisesty, Ayu Purwarianti, Adi Pancoro, Amrita Chattopadhyay, Nam Nhut Phan, Eric Y. Chuang, Tati Rajab Mengko

IEEE Access, 2022

2021

RNASeqR: An R Package for Automated Two-Group RNA-Seq Analysis Workflow.

Kuan-Hao Chao, Yi-Wen Hsiao, Yi-Fang Lee, Chien-Yueh Lee, Liang-Chuan Lai, Mong-Hsun Tsai, Tzu-Pin Lu, Eric Y. Chuang

IEEE ACM Trans. Comput. Biol. Bioinform., 2021

CNVIntegrate: the first multi-ethnic database for identifying copy number variations associated with cancer.

Amrita Chattopadhyay, Zi Han Teoh, Chi-Yun Wu, Jyh-Ming Jimmy Juang, Liang-Chuan Lai, Mong-Hsun Tsai, Chia-Hsin Wu, Tzu-Pin Lu, Eric Y. Chuang

Database J. Biol. Databases Curation, 2021

High-performance deep learning pipeline predicts individuals in mixtures of DNA using sequencing data.

Nam Nhut Phan, Amrita Chattopadhyay, Tsui-Ting Lee, Hsiang-I Yin, Tzu-Pin Lu, Liang-Chuan Lai, Hsiao-Lin Hwa, Mong-Hsun Tsai, Eric Y. Chuang

Briefings Bioinform., 2021

ATTRACTIVE - An Auto-Updating Database for Experimental Protocols in Regenerative Medicine.

Yuan-Mao Hung, Mong-Hsun Tsai, Liang-Chuan Lai, Eric Y. Chuang

IEEE Access, 2021

2019

anamiR: integrated analysis of MicroRNA and gene expression profiling.

Ti-Tai Wang, Chien-Yueh Lee, Liang-Chuan Lai, Mong-Hsun Tsai, Tzu-Pin Lu, Eric Y. Chuang

BMC Bioinform., 2019

VariED: the first integrated database of gene annotation and expression profiles for variants related to human diseases.

Chien-Yueh Lee, Amrita Chattopadhyay, Li-Mei Chiang, Jyh-Ming Jimmy Juang, Liang-Chuan Lai, Mong-Hsun Tsai, Tzu-Pin Lu, Eric Y. Chuang

Database J. Biol. Databases Curation, 2019

2018

Analyzing Differential Regulatory Networks Modulated by Continuous-State Genomic Features in Glioblastoma Multiforme.

Yu-Chiao Chiu, Tzu-Hung Hsiao, Li-Ju Wang, Yidong Chen, Eric Y. Chuang

IEEE ACM Trans. Comput. Biol. Bioinform., 2018

CellExpress: a comprehensive microarray-based cancer cell line and clinical sample gene expression analysis online system.

Yi-Fang Lee, Chien-Yueh Lee, Liang-Chuan Lai, Mong-Hsun Tsai, Tzu-Pin Lu, Eric Y. Chuang

Database J. Biol. Databases Curation, 2018

2017

iGC - an integrated analysis package of gene expression and copy number alteration.

Yi-Pin Lai, Liang-Bo Wang, Wei-An Wang, Liang-Chuan Lai, Mong-Hsun Tsai, Tzu-Pin Lu, Eric Y. Chuang

BMC Bioinform., 2017

Differential correlation analysis of glioblastoma reveals immune ceRNA interactions predictive of patient survival.

Yu-Chiao Chiu, Li-Ju Wang, Tzu-Pin Lu, Tzu-Hung Hsiao, Eric Y. Chuang, Yidong Chen

BMC Bioinform., 2017

2016

A simple gene set-based method accurately predicts the synergy of drug pairs.

Yu-Ching Hsu, Yu-Chiao Chiu, Yidong Chen, Tzu-Hung Hsiao, Eric Y. Chuang

BMC Syst. Biol., 2016

2015

Patho-finder - A fast and accurate program for pathogen identification through RNA-seq.

Chin-Ting Wu, Tzu-Hung Hsiao, Yu-Chiao Chiu, Yu-Ching Hsu, Eric Y. Chuang, Yidong Chen

Proceedings of the 2015 IEEE International Conference on Bioinformatics and Biomedicine, 2015

Analyzing differential regulatory networks modulated by continuous-state genomic features in glioblastoma multiforme.

Yu-Chiao Chiu, Kai-Wen Liang, Tzu-Hung Hsiao, Yidong Chen, Eric Y. Chuang

Proceedings of the 2015 IEEE International Conference on Bioinformatics and Biomedicine, 2015

2014

Estrogen receptor status prediction by gene component regression: a comparative study.

Chi-Cheng Huang, Shih-Hsin Tu, Heng-Hui Lien, Jaan-Yeh Jeng, Jung-Sen Liu, Ching-Shui Huang, Liang-Chuan Lai, Eric Y. Chuang

Int. J. Data Min. Bioinform., 2014

2013

Concurrent analysis of copy number variation and gene expression: application in paired non-smoking female lung cancer patients.

Pei-Chun Chen, Tzu-Pin Lu, Jung-Chih Chang, Liang-Chuan Lai, Mong-Hsun Tsai, Chuhsing Kate Hsiao, Eric Y. Chuang

Int. J. Data Min. Bioinform., 2013

Identification of reproducible gene expression signatures in lung adenocarcinoma.

Tzu-Pin Lu, Eric Y. Chuang, James J. Chen

BMC Bioinform., 2013

Gene Regulation, Modulation, and Their Applications in Gene Expression Data Analysis.

Mario Flores, Tzu-Hung Hsiao, Yu-Chiao Chiu, Eric Y. Chuang, Yufei Huang, Yidong Chen

Adv. Bioinformatics, 2013

Characterization of conditions for competing endogenous RNA regulation in GBM.

Yu-Chiao Chiu, Eric Y. Chuang, Tzu-Hung Hsiao, Yidong Chen

Proceedings of the 2013 IEEE International Workshop on Genomic Signal Processing and Statistics, 2013

Modeling competing endogenous RNA regulatory networks in glioblastoma multiforme.

Yu-Chiao Chiu, Eric Y. Chuang, Tzu-Hung Hsiao, Yidong Chen

Proceedings of the 2013 IEEE International Conference on Bioinformatics and Biomedicine, 2013

2012

Using gene sets to identify putative drugs for breast cancer.

Tzu-Hung Hsiao, Hung-I Harry Chen, Yidong Chen, Yu-Heng Chen, Eric Y. Chuang

Proceedings of the 2012 IEEE International Conference on Bioinformatics and Biomedicine, 2012

2011

DBCAT: Database of CpG Islands and Analytical Tools for Identifying Comprehensive Methylation Profiles in Cancer Cells.

Hsien-Chi Kuo, Po-Yu Lin, Ting-Chiun Chung, Chin-Mei Chao, Liang-Chuan Lai, Mong-Hsun Tsai, Eric Y. Chuang

J. Comput. Biol., 2011

2010

Concurrent analysis of copy number variations and expression profiles to identify genes associated with tumorigenesis and survival outcome in lung adenocarcinoma.

Tzu-Pin Lu, Liang-Chuan Lai, Chuhsing Kate Hsiao, Pei-Chun Chen, Mong-Hsun Tsai, Eric Y. Chuang

Proceedings of the 2010 IEEE International Conference on Bioinformatics and Biomedicine, 2010

Utilizing Cox regression model to assess the relations between predefined gene sets and the survival outcome of lung adenocarcinoma.

Jo-Yang Lu, Eric Y. Chuang, Chuhsing Kate Hsiao, Mong-Hsun Tsai, Liang-Chuan Lai, Pei-Chun Chen

Proceedings of the 2010 IEEE International Conference on Bioinformatics and Biomedicine, 2010

Projecting partial least square and principle component regression across microarray studies.

Chi-Cheng Huang, Heng-Hui Lien, Eric Y. Chuang, Shih-Hsin Tu, Ching-Shui Huang, Liang-Chuan Lai

Proceedings of the 2010 IEEE International Conference on Bioinformatics and Biomedicine Workshops, 2010

Comparison of triple negative breast cancer between Asian and western data sets.

Lee H. Chen, Liang-Chuan Lai, Chuhsing Kate Hsiao, Pei-Chun Chen, Mong-Hsun Tsai, Wen-Hung Kuo, King-Jen Chang, Eric Y. Chuang

Proceedings of the 2010 IEEE International Conference on Bioinformatics and Biomedicine Workshops, 2010

2008

A probe-density-based analysis method for array CGH data: simulation, normalization and centralization.

Hung-I Harry Chen, Fang-Han Hsu, Yuan Jiang, Mong-Hsun Tsai, Pan-Chyr Yang, Paul S. Meltzer, Eric Y. Chuang, Yidong Chen

Bioinform., 2008

2004

Correcting log ratios for signal saturation in cDNA microarrays.

Lori E. Dodd, Edward L. Korn, Lisa M. McShane, G. V. R. Chandramouli, Eric Y. Chuang

Bioinform., 2004