Elena Casiraghi

Orcid: 0000-0003-2024-7572

According to our database1, Elena Casiraghi authored at least 76 papers between 2002 and 2024.

Collaborative distances:
  • Dijkstra number2 of four.
  • Erdős number3 of four.

Timeline

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Bibliography

2024
Predicting nutrition and environmental factors associated with female reproductive disorders using a knowledge graph and random forests.
Int. J. Medical Informatics, 2024

SPIREX: Improving LLM-based relation extraction from RNA-focused scientific literature using graph machine learning.
Proceedings of Workshops at the 50th International Conference on Very Large Data Bases, 2024

Initial achievements in relation extraction from RNA-focused scientific papers.
Proceedings of the 32nd Symposium of Advanced Database Systems, 2024

Fine-Tuning of Conditional Transformers Improves the Generation of Functionally Characterized Proteins.
Proceedings of the 17th International Joint Conference on Biomedical Engineering Systems and Technologies, 2024

2023
The promises of large language models for protein design and modeling.
Frontiers Bioinform., May, 2023

An expectation-maximization framework for comprehensive prediction of isoform-specific functions.
Bioinform., April, 2023

A method for comparing multiple imputation techniques: A case study on the U.S. national COVID cohort collaborative.
J. Biomed. Informatics, March, 2023

Ontologizing health systems data at scale: making translational discovery a reality.
npj Digit. Medicine, 2023

GRAPE for fast and scalable graph processing and random-walk-based embedding.
Nat. Comput. Sci., 2023

RNA-KG: An ontology-based knowledge graph for representing interactions involving RNA molecules.
CoRR, 2023

An Open-Source Knowledge Graph Ecosystem for the Life Sciences.
CoRR, 2023

Towards the Construction of an RNA-centered Knowledge Graph.
Proceedings of the 31st Symposium of Advanced Database Systems, 2023

A Meta-Graph for the Construction of an RNA-Centered Knowledge Graph.
Proceedings of the Bioinformatics and Biomedical Engineering, 2023

Degree-Normalization Improves Random-Walk-Based Embedding Accuracy in PPI Graphs.
Proceedings of the Bioinformatics and Biomedical Engineering, 2023

Enhancing Fairness and Accuracy in Machine Learning Through Similarity Networks.
Proceedings of the Cooperative Information Systems - 29th International Conference, 2023

Intrinsic-Dimension Analysis for Guiding Dimensionality Reduction in Multi-Omics Data.
Proceedings of the 16th International Joint Conference on Biomedical Engineering Systems and Technologies, 2023

Patient Similarity Networks Integration for Partial Multimodal Datasets.
Proceedings of the 16th International Joint Conference on Biomedical Engineering Systems and Technologies, 2023

2022
Ontologizing Health Systems Data at Scale: Making Translational Discovery a Reality.
CoRR, 2022

Tell Bennet, Christopher Chute, Peter DeWitt, Kenneth Gersing, Andrew Girvin, Melissa Haendel, Jeremy Harper, Janos Hajagos, Stephanie Hong, Emily Pfaff, Jane Reusch, Corneliu Antoniescu, Kimberly Robaski: A Methodological Framework for the Comparative Evaluation of Multiple Imputation Methods: Multiple Imputation of Race, Ethnicity and Body Mass Index in the U.S. National COVID Cohort Collaborative.
CoRR, 2022

Boosting tissue-specific prediction of active cis-regulatory regions through deep learning and Bayesian optimization techniques.
BMC Bioinform., 2022

Heterogeneous data integration methods for patient similarity networks.
Briefings Bioinform., 2022

ParSMURF-NG: A Machine Learning High Performance Computing System for the Analysis of Imbalanced Big Omics Data.
Proceedings of the Artificial Intelligence Applications and Innovations. AIAI 2022 IFIP WG 12.5 International Workshops, 2022

2021
Table understanding approaches for extracting knowledge from heterogeneous tables.
WIREs Data Mining Knowl. Discov., 2021

15 Years of Stanca Act: Are Italian Public universities websites accessible?
Univers. Access Inf. Soc., 2021

Abdominal Computed Tomography Imaging Findings in Hospitalized COVID-19 Patients: A Year-Long Experience and Associations Revealed by Explainable Artificial Intelligence.
J. Imaging, 2021

Scoping review on automatic color equalization algorithm.
J. Electronic Imaging, 2021

GraPE: fast and scalable Graph Processing and Embedding.
CoRR, 2021

Het-node2vec: second order random walk sampling for heterogeneous multigraphs embedding.
CoRR, 2021

A diagnostic visible/near infrared tool for a fully automated olive ripeness evaluation in a view of a simplified optical system.
Comput. Electron. Agric., 2021

HEMDAG: a family of modular and scalable hierarchical ensemble methods to improve Gene Ontology term prediction.
Bioinform., 2021

A Web Tool for the Semantic Integration of Heterogeneous and Complex Spreadsheet Tables.
Proceedings of the 29th Italian Symposium on Advanced Database Systems, 2021

2020
A cockpit of multiple measures for assessing film restoration quality.
Pattern Recognit. Lett., 2020

Complex Data Imputation by Auto-Encoders and Convolutional Neural Networks - A Case Study on Genome Gap-Filling.
Comput., 2020

Explainable Machine Learning for Early Assessment of COVID-19 Risk Prediction in Emergency Departments.
IEEE Access, 2020

Human Digital Twin for Fitness Management.
IEEE Access, 2020

Bayesian Optimization Improves Tissue-Specific Prediction of Active Regulatory Regions with Deep Neural Networks.
Proceedings of the Bioinformatics and Biomedical Engineering, 2020

2019
UNIPred-Web: a web tool for the integration and visualization of biomolecular networks for protein function prediction.
BMC Bioinform., 2019

ki67 nuclei detection and ki67-index estimation: a novel automatic approach based on human vision modeling.
BMC Bioinform., 2019

A Survey on Digital Twin: Definitions, Characteristics, Applications, and Design Implications.
IEEE Access, 2019

Virtual Assistants for End-User Development in the Internet of Things.
Proceedings of the End-User Development - 7th International Symposium, 2019

2018
A novel computational method for automatic segmentation, quantification and comparative analysis of immunohistochemically labeled tissue sections.
BMC Bioinform., 2018

A Graphical Tool for the Exploration and Visual Analysis of Biomolecular Networks.
Proceedings of the Computational Intelligence Methods for Bioinformatics and Biostatistics, 2018

2017
Linear Regularized Compression of Deep Convolutional Neural Networks.
Proceedings of the Image Analysis and Processing - ICIAP 2017, 2017

2015
Neighborhood Selection for Dimensionality Reduction.
Proceedings of the Image Analysis and Processing - ICIAP 2015, 2015

2014
DANCo: An intrinsic dimensionality estimator exploiting angle and norm concentration.
Pattern Recognit., 2014

2013
Local Intrinsic Dimensionality Based Features for Clustering.
Proceedings of the Image Analysis and Processing - ICIAP 2013, 2013

2012
Novel Fisher discriminant classifiers.
Pattern Recognit., 2012

Novel high intrinsic dimensionality estimators.
Mach. Learn., 2012

DANCo: Dimensionality from Angle and Norm Concentration
CoRR, 2012

A Novel Intrinsic Dimensionality Estimator Based on Rank-Order Statistics.
Proceedings of the Clustering High-Dimensional Data - First International Workshop, 2012

2011
A Novel Ensemble Technique for Protein Subcellular Location Prediction.
Proceedings of the Ensembles in Machine Learning Applications, 2011

Automatic Alignment of Gel 2D Images.
Proceedings of the Neural Nets WIRN11, 2011

A Novel Approach for Geometric Clustering based on Tensor Voting Framework.
Proceedings of the Neural Nets WIRN11, 2011

Minimum Neighbor Distance Estimators of Intrinsic Dimension.
Proceedings of the Machine Learning and Knowledge Discovery in Databases, 2011

IDEA: Intrinsic Dimension Estimation Algorithm.
Proceedings of the Image Analysis and Processing - ICIAP 2011, 2011

2010
O-IPCAC and its Application to EEG Classification.
Proceedings of the First Workshop on Applications of Pattern Analysis, 2010

A segmentation framework for abdominal organs from CT scans.
Artif. Intell. Medicine, 2010

2009
The Neighbors Voting Algorithm and Its Applications.
Proceedings of the Applications of Supervised and Unsupervised Ensemble Methods, 2009

Liver segmentation from computed tomography scans: A survey and a new algorithm.
Artif. Intell. Medicine, 2009

Novel IPCA-Based Classifiers and Their Application to Spam Filtering.
Proceedings of the Ninth International Conference on Intelligent Systems Design and Applications, 2009

2008
3D Volume Reconstruction and Biometric Analysis of Fetal Brain from MR Images.
Proceedings of the Computational Intelligence Methods for Bioinformatics and Biostatistics, 2008

Fully Automatic Segmentation of Abdominal Organs from CT Images Using Fast Marching Methods.
Proceedings of the Twenty-First IEEE International Symposium on Computer-Based Medical Systems, 2008

Curvature Estimation and Curve Inference with Tensor Voting: A New Approach.
Proceedings of the Advanced Concepts for Intelligent Vision Systems, 2008

2007
Liver Segmentation from CT Scans: A Survey.
Proceedings of the Applications of Fuzzy Sets Theory, 2007

3D <i>alpha</i> -Expansion and Graph Cut Algorithms for Automatic Liver Segmentation from CT Images.
Proceedings of the Knowledge-Based Intelligent Information and Engineering Systems, 2007

Automatic Segmentation of Abdominal Organs from CT Scans.
Proceedings of the 19th IEEE International Conference on Tools with Artificial Intelligence (ICTAI 2007), 2007

Automatic liver segmentation from abdominal CT scans.
Proceedings of the 14th International Conference on Image Analysis and Processing (ICIAP 2007), 2007

2006
A Fully Automated Method for Lung Nodule Detection From Postero-Anterior Chest Radiographs.
IEEE Trans. Medical Imaging, 2006

2005
Support vector machines for candidate nodules classification.
Neurocomputing, 2005

An Automatic Feature Based Face Authentication System, .
Proceedings of the Neural Nets, 16th Italian Workshop on Neural Nets, 2005

Lung nodules detection and classification.
Proceedings of the 2005 International Conference on Image Processing, 2005

Lung Field Segmentation in Digital Postero-Anterior Chest Radiographs.
Proceedings of the Pattern Recognition and Image Analysis, 2005

2004
Pruning the Nodule Candidate Set in Postero Anterior Chest Radiographs.
Proceedings of the Biological and Artificial Intelligence Environments, 2004

Nodule Detection in Postero Anterior Chest Radiographs.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention -- MICCAI 2004, 2004

2003
A Face Detection System Based on Color and Support Vector Machines.
Proceedings of the Neural Nets, 14th Italian Workshop on Neural Nets, 2003

2002
Detection of Facial Features.
Proceedings of the Neural Nets, 13th Italian Workshop on Neural Nets, 2002


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