Elena Beisswanger

According to our database, Elena Beisswanger authored at least 24 papers between 2006 and 2013.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2013

Developing Ontological Background Knowledge for Biomedicine.

Anna Elena Beißwanger

PhD thesis, 2013

2012

Towards valid and reusable reference alignments - ten basic quality checks for ontology alignments and their application to three different reference data sets.

Elena Beisswanger, Udo Hahn

J. Biomed. Semant., 2012

The Extraction of Pharmacogenetic and Pharmacogenomic Relations - A Case Study Using PharmGKB.

Ekaterina Buyko, Elena Beisswanger, Udo Hahn

Proceedings of the Biocomputing 2012: Proceedings of the Pacific Symposium, 2012

Iterative Refinement and Quality Checking of Annotation Guidelines - How to Deal Effectively with Semantically Sloppy Named Entity Types, such as Pathological Phenomena.

Udo Hahn, Elena Beisswanger, Ekaterina Buyko, Erik Faessler, Jenny Traumüller, Susann Schröder, Kerstin Hornbostel

Proceedings of the Eighth International Conference on Language Resources and Evaluation, 2012

Active Learning-Based Corpus Annotation - The PathoJen Experience.

Udo Hahn, Elena Beisswanger, Ekaterina Buyko, Erik Faessler

Proceedings of the AMIA 2012, 2012

2011

Assessment of NER solutions against the first and second CALBC Silver Standard Corpus.

Dietrich Rebholz-Schuhmann, Antonio Jimeno-Yepes, Chen Li, Senay Kafkas, Ian Lewin, Ning Kang, Peter T. Corbett, David Milward, Ekaterina Buyko, Elena Beisswanger, Kerstin Hornbostel, Alexandre Kouznetsov, René Witte, Jonas B. Laurila, Christopher J. O. Baker, Cheng-Ju Kuo, Simon Clematide, Fabio Rinaldi, Richárd Farkas, György Móra, Kazuo Hara, Laura Inés Furlong, Michael Rautschka, Mariana L. Neves, Alberto D. Pascual-Montano, Qi Wei, Nigel Collier, Md. Faisal Mahbub Chowdhury, Alberto Lavelli, Rafael Berlanga Llavori, Roser Morante, Vincent Van Asch, Walter Daelemans, José Luís Marina, Erik M. van Mulligen, Jan A. Kors, Udo Hahn

J. Biomed. Semant., 2011

2010

Calbc Silver Standard Corpus.

Dietrich Rebholz-Schuhmann, Antonio Jimeno-Yepes, Erik M. van Mulligen, Ning Kang, Jan A. Kors, David Milward, Peter T. Corbett, Ekaterina Buyko, Elena Beisswanger, Udo Hahn

J. Bioinform. Comput. Biol., 2010

Exploiting Relation Extraction for Ontology Alignment.

Elena Beisswanger

Proceedings of the Semantic Web - ISWC 2010 - 9th International Semantic Web Conference, 2010

Aligning UniProt and MeSH - A Case Study on Human Protein Terms.

Elena Beisswanger, Joachim Wermter, Udo Hahn

Proceedings of the MEDINFO 2010, 2010

The CALBC Silver Standard Corpus for Biomedical Named Entities - A Study in Harmonizing the Contributions from Four Independent Named Entity Taggers.

Dietrich Rebholz-Schuhmann, Antonio José Jimeno-Yepes, Erik M. van Mulligen, Ning Kang, Jan A. Kors, David Milward, Peter T. Corbett, Ekaterina Buyko, Katrin Tomanek, Elena Beisswanger, Udo Hahn

Proceedings of the International Conference on Language Resources and Evaluation, 2010

The GeneReg Corpus for Gene Expression Regulation Events - An Overview of the Corpus and its In-Domain and Out-of-Domain Interoperability.

Ekaterina Buyko, Elena Beisswanger, Udo Hahn

Proceedings of the International Conference on Language Resources and Evaluation, 2010

A Proposal for a Configurable Silver Standard.

Udo Hahn, Katrin Tomanek, Elena Beisswanger, Erik Faessler

Proceedings of the Fourth Linguistic Annotation Workshop, 2010

2009

Alignment of the UMLS semantic network with BioTop: methodology and assessment.

Stefan Schulz, Elena Beisswanger, László van den Hoek, Olivier Bodenreider, Erik M. van Mulligen

Bioinform., 2009

MaHCO: an ontology of the major histocompatibility complex for immunoinformatic applications and text mining.

David S. DeLuca, Elena Beisswanger, Joachim Wermter, Peter A. Horn, Udo Hahn, Rainer Blasczyk

Bioinform., 2009

2008

BioTop: An upper domain ontology for the life sciencesA description of its current structure, contents and interfaces to OBO ontologies.

Elena Beisswanger, Stefan Schulz, Holger Stenzhorn, Udo Hahn

Appl. Ontology, 2008

BioTop and ChemTop - Top-Domain Ontologies for Biology and Chemistry.

Holger Stenzhorn, Stefan Schulz, Elena Beisswanger, Udo Hahn, László van den Hoek, Erik M. van Mulligen

Proceedings of the Poster and Demonstration Session at the 7th International Semantic Web Conference (ISWC2008), 2008

Gene Regulation Ontology (GRO): Design Principles and Use Cases.

Elena Beisswanger, Vivian Lee, Jung-Jae Kim, Dietrich Rebholz-Schuhmann, Andrea Splendiani, Olivier Dameron, Stefan Schulz, Udo Hahn

Proceedings of the eHealth Beyond the Horizon, 2008

Semantic Annotations for Biology: a Corpus Development Initiative at the Jena University Language & Information Engineering (JULIE) Lab.

Udo Hahn, Elena Beisswanger, Ekaterina Buyko, Michael Poprat, Katrin Tomanek, Joachim Wermter

Proceedings of the International Conference on Language Resources and Evaluation, 2008

WordNet-Inspired Terminological Resources for Bio-NLP.

Elena Beisswanger, Michael Poprat, Udo Hahn

Proceedings of the Ontologies and Text Mining for Life Sciences: Current Status and Future Perspectives, 24.03., 2008

Building a BioWordNet Using WordNet Data Structures and WordNet's Software Infrastructure-A Failure Story.

Michael Poprat, Elena Beisswanger, Udo Hahn

Proceedings of the Software Engineering, 2008

2007

Towards a Top-Domain Ontology for Linking Biomedical Ontologies.

Holger Stenzhorn, Elena Beisswanger, Stefan Schulz

Proceedings of the MEDINFO 2007 - Proceedings of the 12th World Congress on Health (Medical) Informatics, 2007

An Ontology for Major Histocompatibility Complex (MHC) Alleles and Molecules.

Elena Beisswanger, David S. DeLuca, Rainer Blasczyk, Udo Hahn

Proceedings of the AMIA 2007, 2007

2006

From GENIA to BIOTOP - Towards a Top-Level Ontology for Biology.

Stefan Schulz, Elena Beisswanger, Udo Hahn, Joachim Wermter, Anand Kumar, Holger Stenzhorn

Proceedings of the Formal Ontology in Information Systems, 2006

Towards an Upper-Level Ontology for Molecular Biology.

Stefan Schulz, Elena Beisswanger, Joachim Wermter, Udo Hahn

Proceedings of the AMIA 2006, 2006