Eivind Almaas

According to our database, Eivind Almaas authored at least 17 papers between 2005 and 2023.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2023

Genome-scale metabolic models reveal determinants of phenotypic differences in non-Saccharomyces yeasts.

Jakob P. Pettersen, Sandra Castillo, Paula Jouhten, Eivind Almaas

BMC Bioinform., December, 2023

2022

csdR, an R package for differential co-expression analysis.

Jakob P. Pettersen, Eivind Almaas

BMC Bioinform., 2022

2021

Genome-scale metabolic modelling when changes in environmental conditions affect biomass composition.

Christian Schulz, Tjasa Kumelj, Emil Karlsen, Eivind Almaas

PLoS Comput. Biol., 2021

Correction to: Automatic reconstruction of metabolic pathways from identified biosynthetic gene clusters.

Snorre Sulheim, Fredrik A. Fossheim, Alexander Wentzel, Eivind Almaas

BMC Bioinform., 2021

Automatic reconstruction of metabolic pathways from identified biosynthetic gene clusters.

Snorre Sulheim, Fredrik A. Fossheim, Alexander Wentzel, Eivind Almaas

BMC Bioinform., 2021

2020

ErrorTracer: an algorithm for identifying the origins of inconsistencies in genome-scale metabolic models.

Nikolay Martyushenko, Eivind Almaas

Bioinform., 2020

2019

Assessment of weighted topological overlap (wTO) to improve fidelity of gene co-expression networks.

André Voigt, Eivind Almaas

BMC Bioinform., December, 2019

ModelExplorer - software for visual inspection and inconsistency correction of genome-scale metabolic reconstructions.

Nikolay Martyushenko, Eivind Almaas

BMC Bioinform., December, 2019

2018

Automated generation of genome-scale metabolic draft reconstructions based on KEGG.

Emil Karlsen, Christian Schulz, Eivind Almaas

BMC Bioinform., 2018

wTO: an R package for computing weighted topological overlap and a consensus network with integrated visualization tool.

Deisy Morselli Gysi, André Voigt, Tiago de Miranda Fragoso, Eivind Almaas, Katja Nowick

BMC Bioinform., 2018

2017

A composite network of conserved and tissue specific gene interactions reveals possible genetic interactions in glioma.

André Voigt, Katja Nowick, Eivind Almaas

PLoS Comput. Biol., 2017

2016

Hypothetical biomolecular probe based on a genetic switch with tunable symmetry and stability.

Nikolay Martyushenko, Sigurd Hagen Johansen, Cheol-Min Ghim, Eivind Almaas

BMC Syst. Biol., 2016

2012

Genome-level transcription data of Yersinia pestis analyzed with a New metabolic constraint-based approach.

Ali Navid, Eivind Almaas

BMC Syst. Biol., 2012

2009

Identifying Dynamic Network Modules with Temporal and Spatial Constraints.

Ruoming Jin, Scott McCallen, Chun-Chi Liu, Yang Xiang, Eivind Almaas, Xianghong Jasmine Zhou

Proceedings of the Biocomputing 2009: Proceedings of the Pacific Symposium, 2009

2008

Genetic noise control via protein oligomerization.

Cheol-Min Ghim, Eivind Almaas

BMC Syst. Biol., 2008

2007

Trend Motif: A Graph Mining Approach for Analysis of Dynamic Complex Networks.

Ruoming Jin, Scott McCallen, Eivind Almaas

Proceedings of the 7th IEEE International Conference on Data Mining (ICDM 2007), 2007

2005

The Activity Reaction Core and Plasticity of Metabolic Networks.

Eivind Almaas, Zoltán N. Oltvai, Albert-László Barabási

PLoS Comput. Biol., 2005