Eileen E. M. Furlong

According to our database, Eileen E. M. Furlong authored at least 10 papers between 2007 and 2017.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2017

Dynamix: dynamic visualization by automatic selection of informative tracks from hundreds of genomic datasets.

Matthias Monfort, Eileen E. M. Furlong, Charles Girardot

Bioinform., 2017

2016

Qualitative Dynamical Modelling Can Formally Explain Mesoderm Specification and Predict Novel Developmental Phenotypes.

Abibatou Mbodj, Eleanor Hilary Gustafson, Lucia Ciglar, Guillaume Junion, Aitor González, Charles Girardot, Laurent Perrin, Eileen E. M. Furlong, Denis Thieffry

PLoS Comput. Biol., 2016

Je, a versatile suite to handle multiplexed NGS libraries with unique molecular identifiers.

Charles Girardot, Jelle Scholtalbers, Sajoscha Sauer, Shu-Yi Su, Eileen E. M. Furlong

BMC Bioinform., 2016

2015

FourCSeq: analysis of 4C sequencing data.

Felix A. Klein, Tibor Pakozdi, Simon Anders, Yad Ghavi-Helm, Eileen E. M. Furlong, Wolfgang Huber

Bioinform., 2015

2012

Predicting Spatial and Temporal Gene Expression Using an Integrative Model of Transcription Factor Occupancy and Chromatin State.

Bartek Wilczynski, Ya-Hsin Liu, Zhen Xuan Yeo, Eileen E. M. Furlong

PLoS Comput. Biol., 2012

easyRNASeq: a bioconductor package for processing RNA-Seq data.

Nicolas Delhomme, Ismaël Padioleau, Eileen E. M. Furlong, Lars M. Steinmetz

Bioinform., 2012

2010

Model-based method for transcription factor target identification with limited data.

Antti Honkela, Charles Girardot, Eleanor Hilary Gustafson, Ya-Hsin Liu, Eileen E. M. Furlong, Neil D. Lawrence, Magnus Rattray

Proc. Natl. Acad. Sci. USA, 2010

2008

4D<i>Xpress</i>: a database for cross-species expression pattern comparisons.

Yannick Haudry, Hugo Bérubé, Ivica Letunic, Paul-Daniel Weeber, Julien Gagneur, Charles Girardot, Misha Kapushesky, Detlev Arendt, Peer Bork, Alvis Brazma, Eileen E. M. Furlong, Joachim Wittbrodt, Thorsten Henrich

Nucleic Acids Res., 2008

Comparing and Analysing Gene Expression Patterns Across Animal Species Using 4DXpress.

Yannick Haudry, Chuang Kee Ong, Laurence Ettwiller, Hugo Bérubé, Ivica Letunic, Misha Kapushesky, Paul-Daniel Weeber, Xi Wang, Julien Gagneur, Charles Girardot, Detlev Arendt, Peer Bork, Alvis Brazma, Eileen E. M. Furlong, Joachim Wittbrodt, Thorsten Henrich

Proceedings of the 6th Asia-Pacific Bioinformatics Conference, 2008

2007

CoCo: a web application to display, store and curate ChIP-on-chip data integrated with diverse types of gene expression data.

Charles Girardot, Oleg Sklyar, Sophie Grosz, Wolfgang Huber, Eileen E. M. Furlong

Bioinform., 2007