Dzhoshkun I. Shakir

According to our database, Dzhoshkun I. Shakir authored at least 21 papers between 2011 and 2022.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2022

Intraoperative Needle Tip Tracking with an Integrated Fibre-Optic Ultrasound Sensor.

Christian Baker, Miguel Xochicale, Fang-Yu Lin, Sunish Mathews, Francois Joubert, Dzhoshkun I. Shakir, Richard Miles, Charles A. Mosse, Tianrui Zhao, Weidong Liang, Yada Kunpalin, Brian Dromey, Talisa Mistry, Neil J. Sebire, Edward Zhang, Sébastien Ourselin, Paul C. Beard, Anna L. David, Adrien E. Desjardins, Tom Vercauteren, Wenfeng Xia

Sensors, 2022

2021

Zero-Shot Super-Resolution With a Physically-Motivated Downsampling Kernel for Endomicroscopy.

Agnieszka Barbara Szczotka, Dzhoshkun Ismail Shakir, Matthew J. Clarkson, Stephen P. Pereira, Tom Vercauteren

IEEE Trans. Medical Imaging, 2021

2020

Active Annotation of Informative Overlapping Frames in Video Mosaicking Applications.

Loïc Peter, Marcel Tella-Amo, Dzhoshkun Ismail Shakir, Jan Deprest, Sébastien Ourselin, Juan Eugenio Iglesias, Tom Vercauteren

CoRR, 2020

Learning from irregularly sampled data for endomicroscopy super-resolution: a comparative study of sparse and dense approaches.

Agnieszka Barbara Szczotka, Dzhoshkun Ismail Shakir, Daniele Ravì, Matthew J. Clarkson, Stephen P. Pereira, Tom Vercauteren

Int. J. Comput. Assist. Radiol. Surg., 2020

2018

NiftyNet: a deep-learning platform for medical imaging.

Eli Gibson, Wenqi Li, Carole H. Sudre, Lucas Fidon, Dzhoshkun I. Shakir, Guotai Wang, Zach Eaton-Rosen, Robert J. Gray, Tom Doel, Yipeng Hu, Tom Whyntie, Parashkev Nachev, Marc Modat, Dean C. Barratt, Sébastien Ourselin, M. Jorge Cardoso, Tom Vercauteren

Comput. Methods Programs Biomed., 2018

Effective deep learning training for single-image super-resolution in endomicroscopy exploiting video-registration-based reconstruction.

Daniele Ravì, Agnieszka Barbara Szczotka, Dzhoshkun Ismail Shakir, Stephen P. Pereira, Tom Vercauteren

Int. J. Comput. Assist. Radiol. Surg., 2018

Retrieval and registration of long-range overlapping frames for scalable mosaicking of in vivo fetoscopy.

Loïc Peter, Marcel Tella-Amo, Dzhoshkun Ismail Shakir, George Attilakos, Ruwan Wimalasundera, Jan Deprest, Sébastien Ourselin, Tom Vercauteren

Int. J. Comput. Assist. Radiol. Surg., 2018

Technical note: probabilistic visual and electromagnetic data fusion for robust drift-free sequential mosaicking. Application to fetoscopy.

Marcel Tella-Amo, Loïc Peter, Dzhoshkun I. Shakir, Jan Deprest, Danail Stoyanov, Juan Eugenio Iglesias, Tom Vercauteren, Sébastien Ourselin

Proceedings of the Medical Imaging 2018: Image-Guided Procedures, 2018

2017

Bruker2nifti: Magnetic Resonance Images converter from Bruker ParaVision to Nifti format.

Sebastiano Ferraris, Dzhoshkun Ismail Shakir, Johannes L. van der Merwe, Willy Gsell, Jan Deprest, Tom Vercauteren

J. Open Source Softw., 2017

NiftyNet: a deep-learning platform for medical imaging.

Eli Gibson, Wenqi Li, Carole H. Sudre, Lucas Fidon, Dzhoshkun I. Shakir, Guotai Wang, Zach Eaton-Rosen, Robert J. Gray, Tom Doel, Yipeng Hu, Tom Whyntie, Parashkev Nachev, Dean C. Barratt, Sébastien Ourselin, M. Jorge Cardoso, Tom Vercauteren

CoRR, 2017

GIFT-Cloud: A data sharing and collaboration platform for medical imaging research.

Tom Doel, Dzhoshkun I. Shakir, Rosalind Pratt, Michael Aertsen, James Moggridge, Erwin Bellon, Anna L. David, Jan Deprest, Tom Vercauteren, Sébastien Ourselin

Comput. Methods Programs Biomed., 2017

Acquisition models in intraoperative positron surface imaging.

Frederic Monge, Dzhoshkun I. Shakir, Florence Lejeune, Xavier Morandi, Nassir Navab, Pierre Jannin

Int. J. Comput. Assist. Radiol. Surg., 2017

2016

Partition-based acquisition model for speed up navigated beta-probe surface imaging.

Frédéric Monge, Dzhoshkun I. Shakir, Nassir Navab, Pierre Jannin

Proceedings of the Medical Imaging 2016: Image-Guided Procedures, Robotic Interventions, and Modeling, San Diego, California, United States, 27 February, 2016

Real-time mosaicing of fetoscopic videos using SIFT.

Pankaj Daga, François Chadebecq, Dzhoshkun I. Shakir, Luis Carlos García-Peraza-Herrera, Marcel Tella, George Dwyer, Anna L. David, Jan Deprest, Danail Stoyanov, Tom Vercauteren, Sébastien Ourselin

Proceedings of the Medical Imaging 2016: Image-Guided Procedures, Robotic Interventions, and Modeling, San Diego, California, United States, 27 February, 2016

A Combined EM and Visual Tracking Probabilistic Model for Robust Mosaicking: Application to Fetoscopy.

Marcel Tella-Amo, Pankaj Daga, François Chadebecq, Stephen A. Thompson, Dzhoshkun I. Shakir, George Dwyer, Ruwan Wimalasundera, Jan Deprest, Danail Stoyanov, Tom Vercauteren, Sébastien Ourselin

Proceedings of the 2016 IEEE Conference on Computer Vision and Pattern Recognition Workshops, 2016

2014

Intra-operative Nuclear Imaging Based on Positron-emitting Radiotracers (Intra-operative Nuklearmedizinische Bildgebung anhand Positronen-emittierender radioaktiver Tracer)

Dzhoshkun Ismail Shakir

PhD thesis, 2014

2013

Freehand Tomographic Nuclear Imaging Using Tracked High-Energy Gamma Probes.

Asli Okur, Dzhoshkun I. Shakir, Philipp Matthies, Alexander Hartl, Sibylle Ilse Ziegler, Markus Essler, Tobias Lasser, Nassir Navab

Proceedings of the Bildverarbeitung für die Medizin 2013 - Algorithmen - Systeme, 2013

2012

Two new ad-hoc models of detection physics and their evaluation for navigated beta probe surface imaging.

Dzhoshkun I. Shakir, Alexander Hartl, Florian R. Schneider, Jozef Pulko, Sibylle Ilse Ziegler, Nassir Navab, Tobias Lasser

Proceedings of the Medical Imaging 2012: Image-Guided Procedures, 2012

Freehand SPECT reconstructions using look up tables.

Alexander Hartl, Dzhoshkun I. Shakir, Risto Kojchev, Nassir Navab, Sibylle Ilse Ziegler, Tobias Lasser

Proceedings of the Medical Imaging 2012: Image-Guided Procedures, 2012

Towards Intra-operative PET for Head and Neck Cancer: Lymph Node Localization Using High-Energy Probes.

Dzhoshkun I. Shakir, Asli Okur, Alexander Hartl, Philipp Matthies, Sibylle Ilse Ziegler, Markus Essler, Tobias Lasser, Nassir Navab

Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2012, 2012

2011

Evaluation of an ad hoc model of detection physics for navigated beta-probe surface imaging.

Dzhoshkun I. Shakir, Alexander Hartl, Nassir Navab, Sibylle Ilse Ziegler

Proceedings of the Medical Imaging 2011: Visualization, 2011