Dongjun Chung

According to our database, Dongjun Chung authored at least 20 papers between 2011 and 2024.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2024

Analysis of community connectivity in spatial transcriptomics data.

Juan Xie, Kyeong Joo Jung, Carter Allen, Yuzhou Chang, Subhadeep Paul, Zihai Li, Qin Ma, Dongjun Chung

Frontiers Appl. Math. Stat., 2024

Collaborative Design for Job-Seekers with Autism: A Conceptual Framework for Future Research.

Sungsoo Ray Hong, Marcos Zampieri, Brittany N. Hand, Vivian Motti, Dongjun Chung, Özlem Uzuner

CoRR, 2024

Network-based Topic Structure Visualization.

Yeseul Jeon, Jina Park, Ick-Hoon Jin, Dongjun Chung

CoRR, 2024

Collaborative Job Seeking for People with Autism: Challenges and Design Opportunities.

Zinat Ara, Amrita Ganguly, Donna Peppard, Dongjun Chung, Slobodan Vucetic, Vivian Genaro Motti, Sungsoo Ray Hong

Proceedings of the CHI Conference on Human Factors in Computing Systems, 2024

2023

multi-GPA-Tree: Statistical approach for pleiotropy informed and functional annotation tree guided prioritization of GWAS results.

Aastha Khatiwada, Ayse Selen Yilmaz, Bethany J. Wolf, Maciej Pietrzak, Dongjun Chung

PLoS Comput. Biol., December, 2023

Inference of disease-associated microbial gene modules based on metagenomic and metatranscriptomic data.

Zhaoqian Liu, Qi Wang, Anjun Ma, Shaohong Feng, Dongjun Chung, Jing Zhao, Qin Ma, Bingqiang Liu

Comput. Biol. Medicine, October, 2023

LRT: Integrative analysis of scRNA-seq and scTCR-seq data to investigate clonal differentiation heterogeneity.

Juan Xie, Hyeongseon Jeon, Gang Xin, Qin Ma, Dongjun Chung

PLoS Comput. Biol., 2023

2022

GPA-Tree: statistical approach for functional-annotation-tree-guided prioritization of GWAS results.

Aastha Khatiwada, Bethany J. Wolf, Ayse Selen Yilmaz, Paula S. Ramos, Maciej Pietrzak, Andrew Lawson, Kelly J. Hunt, Hang J. Kim, Dongjun Chung

Bioinform., 2022

2021

Graph-based Trajectory Visualization for Text Mining of COVID-19 Biomedical Literature.

Yeseul Jeon, Dongjun Chung, Jina Park, Ick-Hoon Jin

CoRR, 2021

IRIS-FGM: an integrative single-cell RNA-Seq interpretation system for functional gene module analysis.

Yuzhou Chang, Carter Allen, Changlin Wan, Dongjun Chung, Chi Zhang, Zihai Li, Qin Ma

Bioinform., 2021

2020

PALMER: improving pathway annotation based on the biomedical literature mining with a constrained latent block model.

Jin Hyun Nam, Daniel Couch, Willian A. da Silveira, Zhenning Yu, Dongjun Chung

BMC Bioinform., December, 2020

BiMM tree: a decision tree method for modeling clustered and longitudinal binary outcomes.

Jaime Lynn Speiser, Bethany J. Wolf, Dongjun Chung, Constantine J. Karvellas, David G. Koch, Valerie L. Durkalski

Commun. Stat. Simul. Comput., 2020

2019

Predicting daily outcomes in acetaminophen-induced acute liver failure patients with machine learning techniques.

Jaime Lynn Speiser, Constantine J. Karvellas, Bethany J. Wolf, Dongjun Chung, David G. Koch, Valerie L. Durkalski

Comput. Methods Programs Biomed., 2019

2018

Improving SNP prioritization and pleiotropic architecture estimation by incorporating prior knowledge using graph-GPA.

Hang J. Kim, Zhenning Yu, Andrew Lawson, Hongyu Zhao, Dongjun Chung

Bioinform., 2018

2017

graph-GPA: A graphical model for prioritizing GWAS results and investigating pleiotropic architecture.

Dongjun Chung, Hang J. Kim, Hongyu Zhao

PLoS Comput. Biol., 2017

2015

Accurate ensemble pruning with PL-bagging.

Dongjun Chung, Hyunjoong Kim

Comput. Stat. Data Anal., 2015

2013

dPeak: High Resolution Identification of Transcription Factor Binding Sites from PET and SET ChIP-Seq Data.

Dongjun Chung, Dan Park, Kevin Myers, Jeffrey Grass, Patricia J. Kiley, Robert Landick, Sündüz Keles

PLoS Comput. Biol., 2013

2011

Discovering Transcription Factor Binding Sites in Highly Repetitive Regions of Genomes with Multi-Read Analysis of ChIP-Seq Data.

Dongjun Chung, Pei Fen Kuan, Bo Li, Rajendran Sanalkumar, Kun Liang, Emery H. Bresnick, Colin N. Dewey, Sündüz Keles

PLoS Comput. Biol., 2011

Robust classification ensemble method for microarray data.

Dongjun Chung, Hyunjoong Kim

Int. J. Data Min. Bioinform., 2011

eQTL Mapping for Functional Classes of <i>Saccharomyces cerevisiae</i> Genes with Multivariate Sparse Partial Least Squares Regression.

Dongjun Chung, Sündüz Keles

Proceedings of the Handbook of Statistical Bioinformatics., 2011