Dong-Yup Lee

According to our database, Dong-Yup Lee authored at least 17 papers between 2003 and 2018.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of five.

2018

Genome-scale model-driven strain design for dicarboxylic acid production in Yarrowia lipolytica.

Pranjul Mishra, Na-Rae Lee, Meiyappan Lakshmanan, Minsuk Kim, Byung-Gee Kim, Dong-Yup Lee

BMC Syst. Biol., 2018

2017

BeReTa: a systematic method for identifying target transcriptional regulators to enhance microbial production of chemicals.

Minsuk Kim, Gwanggyu Sun, Dong-Yup Lee, Byung-Gee Kim

Bioinform., 2017

2015

Flux-sum analysis identifies metabolite targets for strain improvement.

Meiyappan Lakshmanan, Tae Yong Kim, Bevan Kai-Sheng Chung, Sang Yup Lee, Dong-Yup Lee

BMC Syst. Biol., 2015

SynLinker: an integrated system for designing linkers and synthetic fusion proteins.

Chengcheng Liu, Ju Xin Chin, Dong-Yup Lee

Bioinform., 2015

2014

Codon Optimization OnLine (COOL): a web-based multi-objective optimization platform for synthetic gene design.

Ju Xin Chin, Bevan Kai-Sheng Chung, Dong-Yup Lee

Bioinform., 2014

Software applications for flux balance analysis.

Meiyappan Lakshmanan, Geoffrey Koh, Bevan Chung, Dong-Yup Lee

Briefings Bioinform., 2014

2013

Cofactor Modification Analysis: a Computational Framework to Identify cofactor specificity Engineering targets for strain Improvement.

Meiyappan Lakshmanan, Bevan Kai-Sheng Chung, Chengcheng Liu, Seon-Won Kim, Dong-Yup Lee

J. Bioinform. Comput. Biol., 2013

2012

Computational codon optimization of synthetic gene for protein expression.

Bevan Chung, Dong-Yup Lee

BMC Syst. Biol., 2012

2011

Mathematical modeling and sensitivity analysis of the integrated TNFα-mediated apoptotic pathway for identifying key regulators.

Geoffrey Koh, Dong-Yup Lee

Comput. Biol. Medicine, 2011

Integrative analysis workflow for the structural and functional classification of C-type lectins.

Geoffrey Koh, Ariana Low, Daren Poh, Yujian Yao, Say Ng, Victor Wong, Vincent Vagenende, Kong-Peng Lam, Dong-Yup Lee

BMC Bioinform., 2011

2009

Flux-sum analysis: a metabolite-centric approach for understanding the metabolic network.

Bevan Chung, Dong-Yup Lee

BMC Syst. Biol., 2009

WEbcoli: an interactive and asynchronous web application for <i>in silico</i> design and analysis of genome-scale <i>E.coli</i> model.

Tae-Sung Jung, Hock Chuan Yeo, Satty G. Reddy, Wan-Sup Cho, Dong-Yup Lee

Bioinform., 2009

Web-based applications for building, managing and analysing kinetic models of biological systems.

Dong-Yup Lee, Rajib Saha, Faraaz Noor Khan Yusufi, Wonjun Park, Iftekhar A. Karimi

Briefings Bioinform., 2009

2006

WebCell: a web-based environment for kinetic modeling and dynamic simulation of cellular networks.

Dong-Yup Lee, Choamun Yun, Ayoun Cho, Bo Kyeng Hou, Sunwon Park, Sang Yup Lee

Bioinform., 2006

2005

MFAML: a standard data structure for representing and exchanging metabolic flux models.

Hongseok Yun, Dong-Yup Lee, Joonwoo Jeong, Seunghyun Lee, Sang Yup Lee

Bioinform., 2005

2004

BioSilico: an integrated metabolic database system.

Bo Kyeng Hou, Jin Sik Kim, Ji Hoon Jun, Dong-Yup Lee, Yong Wook Kim, Sujin Chae, Mira Roh, Yong-Ho In, Sang Yup Lee

Bioinform., 2004

2003

MetaFluxNet: the management of metabolic reaction information and quantitative metabolic flux analysis.

Dong-Yup Lee, Hongseok Yun, Sunwon Park, Sang Yup Lee

Bioinform., 2003