Dominik Gront

According to our database, Dominik Gront authored at least 15 papers between 2005 and 2021.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2021

VisuaLife: library for interactive visualization in rich web applications.

Justyna Krys, Dominik Gront

Bioinform., 2021

2020

Better together: Elements of successful scientific software development in a distributed collaborative community.

Julia Koehler Leman, Brian D. Weitzner, P. Douglas Renfrew, Steven M. Lewis, Rocco Moretti, Andrew M. Watkins, Vikram Khipple Mulligan, Sergey Lyskov, Jared Adolf-Bryfogle, Jason W. Labonte, Justyna Krys, RosettaCommons Consortium, Christopher Bystroff, William R. Schief, Dominik Gront, Ora Schueler-Furman, David Baker, Philip Bradley, Roland L. Dunbrack Jr., Tanja Kortemme, Andrew Leaver-Fay, Charlie E. M. Strauss, Jens Meiler, Brian Kuhlman, Jeffrey J. Gray, Richard Bonneau

PLoS Comput. Biol., 2020

Practical Considerations for Atomistic Structure Modeling with Cryo-EM Maps.

Doo Nam Kim, Dominik Gront, Karissa Y. Sanbonmatsu

J. Chem. Inf. Model., 2020

2014

BioShell-Threading: versatile Monte Carlo package for protein 3D threading.

Pawel Gniewek, Andrzej Kolinski, Andrzej Kloczkowski, Dominik Gront

BMC Bioinform., 2014

2012

BioShell Threader: protein homology detection based on sequence profiles and secondary structure profiles.

Dominik Gront, Maciej Blaszczyk, Piotr Wojciechowski, Andrzej Kolinski

Nucleic Acids Res., 2012

Optimization of Profile-to-Profile Alignment Parameters for One-Dimensional Threading.

Pawel Gniewek, Andrzej Kolinski, Dominik Gront

J. Comput. Biol., 2012

2008

Fast and accurate methods for predicting short-range constraints in protein models.

Dominik Gront, Andrzej Kolinski

J. Comput. Aided Mol. Des., 2008

Utility library for structural bioinformatics.

Dominik Gront, Andrzej Kolinski

Bioinform., 2008

2007

Backbone building from quadrilaterals: A fast and accurate algorithm for protein backbone reconstruction from alpha carbon coordinates.

Dominik Gront, Sebastian Kmiecik, Andrzej Kolinski

J. Comput. Chem., 2007

Comparative modeling without implicit sequence alignments.

Andrzej Kolinski, Dominik Gront

Bioinform., 2007

T-Pile - a package for thermodynamic calculations for biomolecules.

Dominik Gront, Andrzej Kolinski

Bioinform., 2007

2006

BioShell - a package of tools for structural biology computations.

Dominik Gront, Andrzej Kolinski

Bioinform., 2006

2005

Protein structure prediction by tempering spatial constraints.

Dominik Gront, Andrzej Kolinski, Ulrich H. E. Hansmann

J. Comput. Aided Mol. Des., 2005

HCPM - program for hierarchical clustering of protein models.

Dominik Gront, Andrzej Kolinski

Bioinform., 2005

A new approach to prediction of short-range conformational propensities in proteins.

Dominik Gront, Andrzej Kolinski

Bioinform., 2005