Domenica D'Elia

According to our database, Domenica D'Elia authored at least 26 papers between 1999 and 2024.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2024

Exploiting microRNA Expression Data for the Diagnosis of Disease Conditions and the Discovery of Novel Biomarkers.

Daniele Rosa, Antonio Pellicani, Gianvito Pio, Domenica D'Elia, Michelangelo Ceci

Proceedings of the Foundations of Intelligent Systems - 27th International Symposium, 2024

2022

Ten simple rules on how to develop a stakeholder engagement plan.

Susanne Hollmann, Babette Regierer, Jaele Bechis, Lesley Tobin, Domenica D'Elia

PLoS Comput. Biol., October, 2022

2020

Ten simple rules on how to write a standard operating procedure.

Susanne Hollmann, Marcus Frohme, Christoph Endrullat, Andreas Kremer, Domenica D'Elia, Babette Regierer, Alina S. Nechyporenko

PLoS Comput. Biol., 2020

The need for standardisation in life science research - an approach to excellence and trust.

Susanne Hollmann, Andreas Kremer, Spela Baebler, Christophe Trefois, Kristina Gruden, Witold R. Rudnicki, Weida Tong, Aleksandra Gruca, Erik Bongcam-Rudloff, Chris T. A. Evelo, Alina S. Nechyporenko, Marcus Frohme, David Safránek, Babette Regierer, Domenica D'Elia

F1000Research, 2020

Prediction of new associations between ncRNAs and diseases exploiting multi-type hierarchical clustering.

Emanuele Pio Barracchia, Gianvito Pio, Domenica D'Elia, Michelangelo Ceci

BMC Bioinform., 2020

Exploiting transfer learning for the reconstruction of the human gene regulatory network.

Paolo Mignone, Gianvito Pio, Domenica D'Elia, Michelangelo Ceci

Bioinform., 2020

2018

Arena-Idb: a platform to build human non-coding RNA interaction networks.

Vincenzo Bonnici, Giorgio De Caro, Giorgio Constantino, Sabino Liuni, Domenica D'Elia, Nicola Bombieri, Flavio Licciulli, Rosalba Giugno

BMC Bioinform., 2018

Standardization and Quality Assurance in Life-Science Research - Crucially Needed or Unnecessary and Annoying Regulation?

Susanne Hollmann, Teresa K. Attwood, Erik Bongcam-Rudloff, Deborah Duca, Domenica D'Elia, Christoph Endrullat, Marcus Frohme, Katrin Messerschmidt, Babette Regierer

Proceedings of the ICT Innovations 2018. Engineering and Life Sciences, 2018

2017

The joint NETTAB/Integrative Bioinformatics 2015 Meeting: aims, topics and outcomes.

Paolo Romano, Ralf Hofestädt, Matthias Lange, Domenica D'Elia

BMC Bioinform., 2017

2015

ComiRNet: a web-based system for the analysis of miRNA-gene regulatory networks.

Gianvito Pio, Michelangelo Ceci, Donato Malerba, Domenica D'Elia

BMC Bioinform., 2015

2014

Integrating microRNA target predictions for the discovery of gene regulatory networks: a semi-supervised ensemble learning approach.

Gianvito Pio, Donato Malerba, Domenica D'Elia, Michelangelo Ceci

BMC Bioinform., 2014

Learning to Combine miRNA Target Predictions: a Semi-supervised Ensemble Learning Approach.

Gianvito Pio, Michelangelo Ceci, Domenica D'Elia, Donato Malerba

Proceedings of the 22nd Italian Symposium on Advanced Database Systems, 2014

Network Reconstruction for the Identification of miRNA: mRNA Interaction Networks.

Gianvito Pio, Michelangelo Ceci, Domenica D'Elia, Donato Malerba

Proceedings of the Machine Learning and Knowledge Discovery in Databases, 2014

2013

A Novel Biclustering Algorithm for the Discovery of Meaningful Biological Correlations between microRNAs and their Target Genes.

Gianvito Pio, Michelangelo Ceci, Domenica D'Elia, Corrado Loglisci, Donato Malerba

BMC Bioinform., 2013

HOCCLUS2: A Biclustering Algorithm for the Discovery of miRNA: mRNA regulatory modules.

Gianvito Pio, Michelangelo Ceci, Domenica D'Elia, Corrado Loglisci, Donato Malerba

Proceedings of the 21st Italian Symposium on Advanced Database Systems, 2013

2012

Hierarchical and Overlapping Co-Clustering of mRNA: miRNA Interactions.

Gianvito Pio, Michelangelo Ceci, Corrado Loglisci, Domenica D'Elia, Donato Malerba

Proceedings of the ECAI 2012, 2012

2011

Mining Spatial Association Rules for Composite Motif Discovery.

Michelangelo Ceci, Corrado Loglisci, Eliana Salvemini, Domenica D'Elia, Donato Malerba

Proceedings of the Mathematical Approaches to Polymer Sequence Analysis and Related Problems, 2011

2009

Computational annotation of UTR cis-regulatory modules through Frequent Pattern Mining.

Antonio Turi, Corrado Loglisci, Eliana Salvemini, Giorgio Grillo, Donato Malerba, Domenica D'Elia

BMC Bioinform., 2009

The 20^th anniversary of EMBnet: 20 years of bioinformatics for the Life Sciences community.

Domenica D'Elia, Andreas Gisel, Nils-Einar Eriksson, Sophia Kossida, Kimmo Mattila, Lubos Klucar, Erik Bongcam-Rudloff

BMC Bioinform., 2009

Mining Frequent Patterns of Biological Spaced Motifs.

Corrado Loglisci, Eliana Salvemini, Antonio Turi, Giorgio Grillo, Donato Malerba, Domenica D'Elia

Proceedings of the Seventeenth Italian Symposium on Advanced Database Systems, 2009

2006

MitoRes: a resource of nuclear-encoded mitochondrial genes and their products in Metazoa.

Domenico Catalano, Flavio Licciulli, Antonio Turi, Giorgio Grillo, Cecilia Saccone, Domenica D'Elia

BMC Bioinform., 2006

2000

Update of KEYnet: a gene and protein names database for biosequences functional organisation.

Domenico Catalano, Flavio Licciulli, Domenica D'Elia, Marcella Attimonelli

Nucleic Acids Res., 2000

MitBASE : a comprehensive and integrated mitochondrial DNA database. The present status.

Marcella Attimonelli, N. Altamura, R. Benne, A. Brennicke, J. M. Cooper, Domenica D'Elia, A. de Montalvo, B. de Pinto, Mariateresa De Robertis, Pawel Golik, Volker Knoop, Cecilia Lanave, Jaga Lazowska, Flavio Licciulli, B. S. Malladi, F. Memeo, M. Monnerot, R. Pasimeni, Sandrine Pilbout, A. H. V. Schapira, P. Sloof, Cecilia Saccone

Nucleic Acids Res., 2000

1999

KEYnet: a keywords database for biosequences functional organization.

Flavio Licciulli, Domenico Catalano, Domenica D'Elia, V. Lorusso, Marcella Attimonelli

Nucleic Acids Res., 1999

Update of the Human MitBASE database.

Marcella Attimonelli, J. M. Cooper, Domenica D'Elia, A. de Montalvo, Mariateresa De Robertis, Heikki Lehväslaiho, S. B. Malladi, F. Memeo, K. Stevens, A. H. V. Schapira, Cecilia Saccone

Nucleic Acids Res., 1999

MitBASE: a comprehensive and integrated mitochondrial DNA database.

Marcella Attimonelli, N. Altamura, R. Benne, C. Boyen, A. Brennicke, A. Carone, J. M. Cooper, Domenica D'Elia, A. de Montalvo, B. de Pinto, Mariateresa De Robertis, Pawel Golik, J. M. Grienenberger, Volker Knoop, Cecilia Lanave, Jaga Lazowska, A. Lemagnen, B. S. Malladi, F. Memeo, M. Monnerot, Sandrine Pilbout, A. H. V. Schapira, P. Sloof, Piotr P. Slonimski, K. Stevens, Cecilia Saccone

Nucleic Acids Res., 1999