Dmitri Beglov

According to our database, Dmitri Beglov authored at least 12 papers between 2009 and 2024.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2024

Expanding FTMap for Fragment-Based Identification of Pharmacophore Regions in Ligand Binding Sites.

Omeir Khan, George Jones, Maria Lazou, Diane Joseph-McCarthy, Dima Kozakov, Dmitri Beglov, Sandor Vajda

J. Chem. Inf. Model., 2024

2020

Benchmark Sets for Binding Hot Spot Identification in Fragment-Based Ligand Discovery.

Amanda E. Wakefield, Christine Yueh, Dmitri Beglov, Marcelo Santos Castilho, Dima Kozakov, György M. Keserü, Adrian Whitty, Sandor Vajda

J. Chem. Inf. Model., 2020

2018

Protein-ligand docking using FFT based sampling: D3R case study.

Dzmitry Padhorny, David R. Hall, Hanieh Mirzaei, Artem B. Mamonov, Mohammad Moghadasi, Andrey Alekseenko, Dmitri Beglov, Dima Kozakov

J. Comput. Aided Mol. Des., 2018

2017

ClusPro PeptiDock: efficient global docking of peptide recognition motifs using FFT.

Kathryn A. Porter, Bing Xia, Dmitri Beglov, Tanggis Bohnuud, Nawsad Alam, Ora Schueler-Furman, Dima Kozakov

Bioinform., 2017

2014

Docking Server for the Identification of Heparin Binding Sites on Proteins.

Scott E. Mottarella, Dmitri Beglov, Natalia Beglova, Matthew A. Nugent, Dima Kozakov, Sandor Vajda

J. Chem. Inf. Model., 2014

2013

FTFlex: accounting for binding site flexibility to improve fragment-based identification of druggable hot spots.

Laurie E. Grove, David R. Hall, Dmitri Beglov, Sandor Vajda, Dima Kozakov

Bioinform., 2013

Flexible refinement of protein-ligand docking on manifolds.

Hanieh Mirzaei, Elizabeth A. Villar, Scott E. Mottarella, Dmitri Beglov, Ioannis Ch. Paschalidis, Sandor Vajda, Dima Kozakov, Pirooz Vakili

Proceedings of the 52nd IEEE Conference on Decision and Control, 2013

2012

FTMAP: extended protein mapping with user-selected probe molecules.

Chi-Ho Ngan, Tanggis Bohnuud, Scott E. Mottarella, Dmitri Beglov, Elizabeth A. Villar, David R. Hall, Dima Kozakov, Sandor Vajda

Nucleic Acids Res., 2012

Application of asymmetric statistical potentials to antibody-protein docking.

Ryan Brenke, David R. Hall, Gwo-Yu Chuang, Stephen R. Comeau, Tanggis Bohnuud, Dmitri Beglov, Ora Schueler-Furman, Sandor Vajda, Dima Kozakov

Bioinform., 2012

A new approach to rigid body minimization with application to molecular docking.

Hanieh Mirzaei, Dima Kozakov, Dmitri Beglov, Ioannis Ch. Paschalidis, Sandor Vajda, Pirooz Vakili

Proceedings of the 51th IEEE Conference on Decision and Control, 2012

2009

Detection of ligand binding hot spots on protein surfaces via fragment-based methods: application to DJ-1 and glucocerebrosidase.

Melissa R. Landon, Raquel L. Lieberman, Quyen Q. Hoang, Shulin Ju, Jose M. M. Caaveiro, Susan D. Orwig, Dima Kozakov, Ryan Brenke, Gwo-Yu Chuang, Dmitri Beglov, Sandor Vajda, Gregory A. Petsko, Dagmar Ringe

J. Comput. Aided Mol. Des., 2009

Fragment-based identification of druggable 'hot spots' of proteins using Fourier domain correlation techniques.

Ryan Brenke, Dima Kozakov, Gwo-Yu Chuang, Dmitri Beglov, David R. Hall, Melissa R. Landon, Carla Mattos, Sandor Vajda

Bioinform., 2009