Dina Demner-Fushman

Orcid: 0000-0002-4361-5799

According to our database1, Dina Demner-Fushman authored at least 242 papers between 2002 and 2024.

Collaborative distances:
  • Dijkstra number2 of four.
  • Erdős number3 of four.

Timeline

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Bibliography

2024
On the role of the UMLS in supporting diagnosis generation proposed by Large Language Models.
J. Biomed. Informatics, 2024

Toward Relieving Clinician Burden by Automatically Generating Progress Notes using Interim Hospital Data.
CoRR, 2024

Pedagogically Aligned Objectives Create Reliable Automatic Cloze Tests.
Proceedings of the 2024 Conference of the North American Chapter of the Association for Computational Linguistics: Human Language Technologies (Volume 1: Long Papers), 2024

Towards Answering Health-related Questions from Medical Videos: Datasets and Approaches.
Proceedings of the 2024 Joint International Conference on Computational Linguistics, 2024

Sentence-Aligned Simplification of Biomedical Abstracts.
Proceedings of the Artificial Intelligence in Medicine - 22nd International Conference, 2024

Empowering Language Model with Guided Knowledge Fusion for Biomedical Document Re-ranking.
Proceedings of the Artificial Intelligence in Medicine - 22nd International Conference, 2024

2023
Medical image retrieval via nearest neighbor search on pre-trained image features.
Knowl. Based Syst., October, 2023

The National Library of Medicine indexer assignment dataset: A new large-scale dataset for reviewer assignment research.
J. Assoc. Inf. Sci. Technol., February, 2023

2022
Question-aware transformer models for consumer health question summarization.
J. Biomed. Informatics, 2022

A survey of automated methods for biomedical text simplification.
J. Am. Medical Informatics Assoc., 2022

A Dataset for Plain Language Adaptation of Biomedical Abstracts.
CoRR, 2022

Clinical Language Understanding Evaluation (CLUE).
CoRR, 2022

CHQ-Summ: A Dataset for Consumer Healthcare Question Summarization.
CoRR, 2022

A Dataset for Medical Instructional Video Classification and Question Answering.
CoRR, 2022

Overview of the TREC 2022 Clinical Trials Track.
Proceedings of the Thirty-First Text REtrieval Conference, 2022

Overview of the MedVidQA 2022 Shared Task on Medical Video Question-Answering.
Proceedings of the 21st Workshop on Biomedical Language Processing, 2022

2021
Searching for scientific evidence in a pandemic: An overview of TREC-COVID.
J. Biomed. Informatics, 2021

Goal-Driven Visual Question Generation from Radiology Images.
Inf., 2021

Multi-Task Transfer Learning with Data Augmentation for Recognizing Question Entailment in the Medical Domain.
Proceedings of the 9th IEEE International Conference on Healthcare Informatics, 2021

Evidence-based Fact-Checking of Health-related Claims.
Proceedings of the Findings of the Association for Computational Linguistics: EMNLP 2021, 2021


NLM at BioASQ Synergy 2021: Deep Learning-based Methods for Biomedical Semantic Question Answering about COVID-19.
Proceedings of the Working Notes of CLEF 2021 - Conference and Labs of the Evaluation Forum, Bucharest, Romania, September 21st - to, 2021

A Neural Text Ranking Approach for Automatic MeSH Indexing.
Proceedings of the Working Notes of CLEF 2021 - Conference and Labs of the Evaluation Forum, Bucharest, Romania, September 21st - to, 2021


Overview of the VQA-Med Task at ImageCLEF 2021: Visual Question Answering and Generation in the Medical Domain.
Proceedings of the Working Notes of CLEF 2021 - Conference and Labs of the Evaluation Forum, Bucharest, Romania, September 21st - to, 2021

Overview of the MEDIQA 2021 Shared Task on Summarization in the Medical Domain.
Proceedings of the 20th Workshop on Biomedical Language Processing, 2021

Reproducibility in biomedical natural language processing: A FAIR approach to what we need to know.
Proceedings of the AMIA 2021, American Medical Informatics Association Annual Symposium, San Diego, CA, USA, October 30, 2021, 2021

Reinforcement Learning for Abstractive Question Summarization with Question-aware Semantic Rewards.
Proceedings of the 59th Annual Meeting of the Association for Computational Linguistics and the 11th International Joint Conference on Natural Language Processing, 2021

AI-NLM exploration of the Acronym Identification Shared Task at SDU@AAAI-21.
Proceedings of the Workshop on Scientific Document Understanding co-located with 35th AAAI Conference on Artificial Inteligence, 2021

Automatic recognition of figurative language in biomedical articles.
Proceedings of the Workshop on Scientific Document Understanding co-located with 35th AAAI Conference on Artificial Inteligence, 2021

2020
TREC-COVID: constructing a pandemic information retrieval test collection.
SIGIR Forum, 2020

Understanding spatial language in radiology: Representation framework, annotation, and spatial relation extraction from chest X-ray reports using deep learning.
J. Biomed. Informatics, 2020

TREC-COVID: rationale and structure of an information retrieval shared task for COVID-19.
J. Am. Medical Informatics Assoc., 2020

A customizable deep learning model for nosocomial risk prediction from critical care notes with indirect supervision.
J. Am. Medical Informatics Assoc., 2020

Consumer health information and question answering: helping consumers find answers to their health-related information needs.
J. Am. Medical Informatics Assoc., 2020

Question-Driven Summarization of Answers to Consumer Health Questions.
CoRR, 2020

Overview of the TREC 2020 Precision Medicine Track.
Proceedings of the Twenty-Ninth Text REtrieval Conference, 2020

NLM at TREC 2020 Health Misinformation and Deep Learning Tracks.
Proceedings of the Twenty-Ninth Text REtrieval Conference, 2020

Towards Zero Shot Conditional Summarization with Adaptive Multi-task Fine-Tuning.
Proceedings of the Findings of the Association for Computational Linguistics: EMNLP 2020, 2020


HOLMS: Alternative Summary Evaluation with Large Language Models.
Proceedings of the 28th International Conference on Computational Linguistics, 2020

Flight of the PEGASUS? Comparing Transformers on Few-shot and Zero-shot Multi-document Abstractive Summarization.
Proceedings of the 28th International Conference on Computational Linguistics, 2020


Overview of the VQA-Med Task at ImageCLEF 2020: Visual Question Answering and Generation in the Medical Domain.
Proceedings of the Working Notes of CLEF 2020, 2020

Automatic MeSH Indexing: Revisiting the Subheading Attachment Problem.
Proceedings of the AMIA 2020, 2020

2019
Spell checker for consumer language (CSpell).
J. Am. Medical Informatics Assoc., 2019

Bridging the Knowledge Gap: Enhancing Question Answering with World and Domain Knowledge.
CoRR, 2019

A question-entailment approach to question answering.
BMC Bioinform., 2019

Overview of the TREC 2019 Precision Medicine Track.
Proceedings of the Twenty-Eighth Text REtrieval Conference, 2019

Overview of the TAC 2019 Track on Drug-Drug Interaction Extraction from Drug Labels.
Proceedings of the 2019 Text Analysis Conference, 2019

Convolutional Neural Network for Automatic MeSH Indexing.
Proceedings of the Machine Learning and Knowledge Discovery in Databases, 2019

On Agreements in Visual Understanding.
Proceedings of the Visually Grounded Interaction and Language (ViGIL), 2019

Bridging the Gap Between Consumers' Medication Questions and Trusted Answers.
Proceedings of the MEDINFO 2019: Health and Wellbeing e-Networks for All, 2019



VQA-Med: Overview of the Medical Visual Question Answering Task at ImageCLEF 2019.
Proceedings of the Working Notes of CLEF 2019, 2019

Overview of the MEDIQA 2019 Shared Task on Textual Inference, Question Entailment and Question Answering.
Proceedings of the 18th BioNLP Workshop and Shared Task, 2019

Evaluation of System for Selective Indexing Classification.
Proceedings of the AMIA 2019, 2019

A High Recall Classifier for Selecting Articles for MEDLINE Indexing.
Proceedings of the AMIA 2019, 2019

Drug-drug Interaction Extraction via Transfer Learning.
Proceedings of the AMIA 2019, 2019

Classification Types: A New Feature in the SPECIALIST Lexicon.
Proceedings of the AMIA 2019, 2019

Deep Learning from Incomplete Data: Detecting Imminent Risk of Hospital-acquired Pneumonia in ICU Patients.
Proceedings of the AMIA 2019, 2019

On the Summarization of Consumer Health Questions.
Proceedings of the 57th Conference of the Association for Computational Linguistics, 2019

2018
Semantic annotation of consumer health questions.
BMC Bioinform., 2018

Overview of the TREC 2018 Precision Medicine Track.
Proceedings of the Twenty-Seventh Text REtrieval Conference, 2018

Overview of the TAC 2018 Drug-Drug Interaction Extraction from Drug Labels Track.
Proceedings of the 2018 Text Analysis Conference, 2018

Clinical, Consumer Health, and Visual Question Answering.
Proceedings of the Information Management and Big Data, 5th International Conference, 2018

NLM at ImageCLEF 2018 Visual Question Answering in the Medical Domain.
Proceedings of the Working Notes of CLEF 2018, 2018

Benchmarking Information Retrieval for Precision Oncology: the TREC Precision Medicine Track.
Proceedings of the AMIA 2018, 2018

Improving Spelling Correction with Consumer Health Terminology.
Proceedings of the AMIA 2018, 2018

Increasing UMLS Coverage and Reducing Ambiguity via Automated Creation of Synonymous Terms.
Proceedings of the AMIA 2018, 2018

Adverse Reactions and Drug-Drug Interaction Extraction tracks at the Text Analysis Conference (TAC).
Proceedings of the AMIA 2018, 2018

Finding medication doses in the literature.
Proceedings of the AMIA 2018, 2018

2017
A protocol-driven approach to automatically finding authoritative answers to consumer health questions in online resources.
J. Assoc. Inf. Sci. Technol., 2017

Automated classification of eligibility criteria in clinical trials to facilitate patient-trial matching for specific patient populations.
J. Am. Medical Informatics Assoc., 2017

MetaMap Lite: an evaluation of a new Java implementation of MetaMap.
J. Am. Medical Informatics Assoc., 2017

12 years on - Is the NLM medical text indexer still useful and relevant?
J. Biomed. Semant., 2017

Information retrieval for biomedical datasets: the 2016 bioCADDIE dataset retrieval challenge.
Database J. Biol. Databases Curation, 2017

A publicly available benchmark for biomedical dataset retrieval: the reference standard for the 2016 bioCADDIE dataset retrieval challenge.
Database J. Biol. Databases Curation, 2017

Overview of the TREC 2017 Precision Medicine Track.
Proceedings of The Twenty-Sixth Text REtrieval Conference, 2017

Overview of the Medical Question Answering Task at TREC 2017 LiveQA.
Proceedings of The Twenty-Sixth Text REtrieval Conference, 2017

Overview of the TAC 2017 Adverse Reaction Extraction from Drug Labels Track.
Proceedings of the 2017 Text Analysis Conference, 2017

NLM_NIH at SemEval-2017 Task 3: from Question Entailment to Question Similarity for Community Question Answering.
Proceedings of the 11th International Workshop on Semantic Evaluation, 2017

NLM at ImageCLEF 2017 Caption Task.
Proceedings of the Working Notes of CLEF 2017, 2017

Named entity recognition in functional neuroimaging literature.
Proceedings of the 2017 IEEE International Conference on Bioinformatics and Biomedicine, 2017

Mining the literature for genes associated with placenta-mediated maternal diseases.
Proceedings of the AMIA 2017, 2017

Information Retrieval for Biomedical Datasets: The 2016 bioCADDIE Challenge.
Proceedings of the AMIA 2017, 2017

New MetaMap Features for Processing Numerical Tables.
Proceedings of the AMIA 2017, 2017

Evaluation of Clinical Text Segmentation to Facilitate Cohort Retrieval.
Proceedings of the AMIA 2017, 2017

CTB: A Custom Taxonomy Builder for Named Entity Extraction.
Proceedings of the AMIA 2017, 2017

TextFlow: A Text Similarity Measure based on Continuous Sequences.
Proceedings of the 55th Annual Meeting of the Association for Computational Linguistics, 2017

2016
Interactive use of online health resources: a comparison of consumer and professional questions.
J. Am. Medical Informatics Assoc., 2016

Preparing a collection of radiology examinations for distribution and retrieval.
J. Am. Medical Informatics Assoc., 2016

State-of-the-art in biomedical literature retrieval for clinical cases: a survey of the TREC 2014 CDS track.
Inf. Retr. J., 2016

Meta-Learning with Selective Data Augmentation for Medical Entity Recognition.
Int. J. Comput. Linguistics Appl., 2016

Overview of the TREC 2016 Clinical Decision Support Track.
Proceedings of The Twenty-Fifth Text REtrieval Conference, 2016

Annotating Logical Forms for EHR Questions.
Proceedings of the Tenth International Conference on Language Resources and Evaluation LREC 2016, 2016

Annotating Named Entities in Consumer Health Questions.
Proceedings of the Tenth International Conference on Language Resources and Evaluation LREC 2016, 2016

Unsupervised Ranking of Knowledge Bases for Named Entity Recognition.
Proceedings of the ECAI 2016 - 22nd European Conference on Artificial Intelligence, 29 August-2 September 2016, The Hague, The Netherlands, 2016

Learning to Read Chest X-Rays: Recurrent Neural Cascade Model for Automated Image Annotation.
Proceedings of the 2016 IEEE Conference on Computer Vision and Pattern Recognition, 2016

A Hybrid Approach to Generation of Missing Abstracts in Biomedical Literature.
Proceedings of the COLING 2016, 2016

Modality Classification for Searching Figures in Biomedical Literature.
Proceedings of the 29th IEEE International Symposium on Computer-Based Medical Systems, 2016

Towards automatic discovery of Genes related to Human Placenta.
Proceedings of the AMIA 2016, 2016

Resource Classification for Medical Questions.
Proceedings of the AMIA 2016, 2016

Combining Open-domain and Biomedical Knowledge for Topic Recognition in Consumer Health Questions.
Proceedings of the AMIA 2016, 2016

Resolving Hierarchical Ambiguity in Indexing Recommendations.
Proceedings of the AMIA 2016, 2016

Natural Language Processing Working Group Pre-Symposium: Graduate Student Consortium and 'Hackathon'.
Proceedings of the AMIA 2016, 2016

Recognizing Question Entailment for Medical Question Answering.
Proceedings of the AMIA 2016, 2016

Aligning Texts and Knowledge Bases with Semantic Sentence Simplification.
Proceedings of the 2nd International Workshop on Natural Language Generation and the Semantic Web, 2016

2015
The role of fine-grained annotations in supervised recognition of risk factors for heart disease from EHRs.
J. Biomed. Informatics, 2015

Literature-based biomedical image classification and retrieval.
Comput. Medical Imaging Graph., 2015

Evaluating performance of biomedical image retrieval systems - An overview of the medical image retrieval task at ImageCLEF 2004-2013.
Comput. Medical Imaging Graph., 2015

A decade of community-wide efforts in advancing medical image understanding and retrieval.
Comput. Medical Imaging Graph., 2015

Annotation of Chest Radiology Reports for Indexing and Retrieval.
Proceedings of the Multimodal Retrieval in the Medical Domain, 2015

Foreign object detection in chest X-rays.
Proceedings of the 2015 IEEE International Conference on Bioinformatics and Biomedicine, 2015

Automatic Classification of Structured Product Labels for Pregnancy Risk Drug Categories, a Machine Learning Approach.
Proceedings of the AMIA 2015, 2015

Automatic Extraction and Post-coordination of Spatial Relations in Consumer Language.
Proceedings of the AMIA 2015, 2015

An Ensemble Method for Spelling Correction in Consumer Health Questions.
Proceedings of the AMIA 2015, 2015

Extracting Characteristics of the Study Subjects from Full-Text Articles.
Proceedings of the AMIA 2015, 2015

Automated searches for personalized evidence to prevent hospital acquired infection.
Proceedings of the AMIA 2015, 2015

2014
Research and applications: Combining structured and unstructured data to identify a cohort of ICU patients who received dialysis.
J. Am. Medical Informatics Assoc., 2014

Multimodal biomedical image indexing and retrieval using descriptive text and global feature mapping.
Inf. Retr., 2014

Interactive cross and multimodal biomedical image retrieval based on automatic region-of-interest (ROI) identification and classification.
Int. J. Multim. Inf. Retr., 2014

Integrating visual words as bunch of n-grams for effective biomedical image classification.
Proceedings of the IEEE Winter Conference on Applications of Computer Vision, 2014

Annotating Question Decomposition on Complex Medical Questions.
Proceedings of the Ninth International Conference on Language Resources and Evaluation, 2014

A contour-based shape descriptor for biomedical image classification and retrieval.
Proceedings of the Document Recognition and Retrieval XXI, 2014

Extraction and labeling high-resolution images from PDF documents.
Proceedings of the Document Recognition and Retrieval XXI, 2014

Recent Enhancements to the NLM Medical Text Indexer.
Proceedings of the Working Notes for CLEF 2014 Conference, 2014

An MRF Model for Biomedical Image Segmentation.
Proceedings of the 2014 IEEE 27th International Symposium on Computer-Based Medical Systems, 2014

Does Figure-Text Improve Biomedical Article Retrieval? A Pilot Study.
Proceedings of the 2014 IEEE 27th International Symposium on Computer-Based Medical Systems, 2014

Body Segment Classification for Visible Human Cross Section Slices.
Proceedings of the 2014 IEEE 27th International Symposium on Computer-Based Medical Systems, 2014

Decomposing Consumer Health Questions.
Proceedings of BioNLP, Baltimore, Maryland, USA, 2014

Coreference Resolution for Structured Drug Product Labels.
Proceedings of BioNLP, Baltimore, Maryland, USA, 2014

Biomedical image segmentation for semantic visual feature extraction.
Proceedings of the 2014 IEEE International Conference on Bioinformatics and Biomedicine, 2014

Facilitating Reconciliation of Inter-Annotator Disagreements.
Proceedings of the AMIA 2014, 2014

Automatically Classifying Question Types for Consumer Health Questions.
Proceedings of the AMIA 2014, 2014

Error Propagation in EHRs via Copy/Paste: An Analysis of Relative Dates.
Proceedings of the AMIA 2014, 2014

Vocabulary Density Method for Customized Indexing of MEDLINE Journals.
Proceedings of the AMIA 2014, 2014

Addressing some statistical challenges of using EHR data for clinical research.
Proceedings of the AMIA 2014, 2014

2013
Image retrieval from scientific publications: Text and image content processing to separate multipanel figures.
J. Assoc. Inf. Sci. Technol., 2013

Extracting drug indication information from structured product labels using natural language processing.
J. Am. Medical Informatics Assoc., 2013

Multimodal biomedical image retrieval using hierarchical classification and modality fusion.
Int. J. Multim. Inf. Retr., 2013

Continual Development of a Personalized Decision Support System.
Proceedings of the MEDINFO 2013, 2013

Classification of CT Figures in Biomedical Articles Based on Body Segments.
Proceedings of the IEEE International Conference on Healthcare Informatics, 2013

A robust pointer segmentation in biomedical images toward building a visual ontology for biomedical article retrieval.
Proceedings of the Document Recognition and Retrieval XX, 2013

Annotating image ROIs with text descriptions for multimodal biomedical document retrieval.
Proceedings of the Document Recognition and Retrieval XX, 2013

ITI's Participation in the 2013 Medical Track of ImageCLEF.
Proceedings of the Working Notes for CLEF 2013 Conference , 2013

Overview of the ImageCLEF 2013 Medical Tasks.
Proceedings of the Working Notes for CLEF 2013 Conference , 2013

Interpreting Consumer Health Questions: The Role of Anaphora and Ellipsis.
Proceedings of the 2013 Workshop on Biomedical Natural Language Processing, 2013

Comparison and combination of several MeSH indexing approaches.
Proceedings of the AMIA 2013, 2013

Mining MEDLINE for problems associated with vitamin D.
Proceedings of the AMIA 2013, 2013

A simple method to extract key maternal data from neonatal clinical notes.
Proceedings of the AMIA 2013, 2013

2012
A One-Size-Fits-All Indexing Method Does Not Exist: Automatic Selection Based on Meta-Learning.
J. Comput. Sci. Eng., 2012

Design and Development of a Multimodal Biomedical Information Retrieval System.
J. Comput. Sci. Eng., 2012

A mutation-centric approach to identifying pharmacogenomic relations in text.
J. Biomed. Informatics, 2012

Standardizing clinical laboratory data for secondary use.
J. Biomed. Informatics, 2012

Screening nonrandomized studies for medical systematic reviews: A comparative study of classifiers.
Artif. Intell. Medicine, 2012

NLM at TREC 2012 Medical Records Track.
Proceedings of The Twenty-First Text REtrieval Conference, 2012

MEDLINE MeSH indexing: lessons learned from machine learning and future directions.
Proceedings of the ACM International Health Informatics Symposium, 2012

An Interactive Image Retrieval Framework for Biomedical Articles Based on Visual Region-of- Interest (ROI) Identification and Classification.
Proceedings of the 2012 IEEE Second International Conference on Healthcare Informatics, 2012

Syntactic-Semantic Frames for Clinical Cohort Identification Queries.
Proceedings of the Data Integration in the Life Sciences - 8th International Conference, 2012

ITI's Participation in the ImageCLEF 2012 Medical Retrieval and Classification Tasks.
Proceedings of the CLEF 2012 Evaluation Labs and Workshop, 2012

Overview of the ImageCLEF 2012 Medical Image Retrieval and Classification Tasks.
Proceedings of the CLEF 2012 Evaluation Labs and Workshop, 2012

Domain Adaptation of Coreference Resolution for Radiology Reports.
Proceedings of the 2012 Workshop on Biomedical Natural Language Processing, 2012

Window Classification of Brain CT Images in Biomedical Articles.
Proceedings of the AMIA 2012, 2012

Towards the Creation of a Visual Ontology of Biomedical Imaging Entities.
Proceedings of the AMIA 2012, 2012

Research Designs in Mesh and Emtree: A Comparative Study of Coverage.
Proceedings of the AMIA 2012, 2012

Biomedical Text Mining: A Survey of Recent Progress.
Proceedings of the Mining Text Data, 2012

2011
An image feature-based approach to automatically find images for application to clinical decision support.
Comput. Medical Imaging Graph., 2011

A Knowledge-Based Approach to Medical Records Retrieval.
Proceedings of The Twentieth Text REtrieval Conference, 2011

Biomedical Image Retrieval Using Multimodal Context and Concept Feature Spaces.
Proceedings of the Medical Content-Based Retrieval for Clinical Decision Support, 2011

Detecting Figure-Panel Labels in Medical Journal Articles Using MRF.
Proceedings of the 2011 International Conference on Document Analysis and Recognition, 2011

Automatic identification of ROI in figure images toward improving hybrid (text and image) biomedical document retrieval.
Proceedings of the Document Recognition and Retrieval XVIII, 2011

Text and Content-based Approaches to Image Modality Classification and Retrieval for the ImageCLEF 2011 Medical Retrieval Track.
Proceedings of the CLEF 2011 Labs and Workshop, 2011

Automatic Extraction of Lexico-Syntactic Patterns for Detection of Negation and Speculation Scopes.
Proceedings of the 49th Annual Meeting of the Association for Computational Linguistics: Human Language Technologies, Proceedings of the Conference, 19-24 June, 2011, Portland, Oregon, USA, 2011

2010
Interactive publication: The document as a research tool.
J. Web Semant., 2010

UMLS content views appropriate for NLP processing of the biomedical literature vs. clinical text.
J. Biomed. Informatics, 2010

Extracting Rx information from clinical narrative.
J. Am. Medical Informatics Assoc., 2010

Identifying contextual information in clinical texts: a study of two domains.
Proceedings of the Fourth International Symposium for Semantic Mining in Biomedicine, 2010

Towards Automating the Initial Screening Phase of a Systematic Review.
Proceedings of the MEDINFO 2010, 2010

Biomedical article retrieval using multimodal features and image annotations in region-based CBIR.
Proceedings of the Document Recognition and Retrieval XVII, 2010

Text- and Content-based Approaches to Image Modality Detection and Retrieval for the ImageCLEF 2010 Medical Retrieval Track.
Proceedings of the CLEF 2010 LABs and Workshops, 2010

2009
Automatic summarization of MEDLINE citations for evidence-based medical treatment: A topic-oriented evaluation.
J. Biomed. Informatics, 2009

What can natural language processing do for clinical decision support?
J. Biomed. Informatics, 2009

Viewpoint Paper: Towards Automatic Recognition of Scientifically Rigorous Clinical Research Evidence.
J. Am. Medical Informatics Assoc., 2009

Annotation and retrieval of clinically relevant images.
Int. J. Medical Informatics, 2009

The potential for automated question answering in the context of genomic medicine: an assessment of existing resources and properties of answers.
BMC Bioinform., 2009

Towards Automatic Image Region Annotation - Image Region Textual Coreference Resolution.
Proceedings of the Human Language Technologies: Conference of the North American Chapter of the Association of Computational Linguistics, Proceedings, May 31, 2009

Multi-modal Query Expansion Based on Local Analysis for Medical Image Retrieval.
Proceedings of the Medical Content-Based Retrieval for Clinical Decision Support, 2009

Using Non-Lexical Features to Identify Effective Indexing Terms for Biomedical Illustrations.
Proceedings of the EACL 2009, 12th Conference of the European Chapter of the Association for Computational Linguistics, Proceedings of the Conference, Athens, Greece, March 30, 2009

Figure content analysis for improved biomedical article retrieval.
Proceedings of the Document Recognition and Retrieval XVI, 2009

Text- and Content-based Approaches to Image Retrieval for the ImageCLEF 2009 Medical Retrieval Track.
Proceedings of the Working Notes for CLEF 2009 Workshop co-located with the 13th European Conference on Digital Libraries (ECDL 2009) , Corfù, Greece, September 30, 2009

2008
Themes in biomedical natural language processing: BioNLP08.
BMC Bioinform., 2008

Exploring use of images in clinical articles for decision support in evidence-based medicine.
Proceedings of the Document Recognition and Retrieval XV, 2008

Toward Automatic Recognition of High Quality Clinical Evidence.
Proceedings of the AMIA 2008, 2008

A Prototype System to Support Evidence-based Practice.
Proceedings of the AMIA 2008, 2008

Methodology for Creating UMLS Content Views Appropriate for Biomedical Natural Language Processing.
Proceedings of the AMIA 2008, 2008

Adapting Naturally Occurring Test Suites for Evaluation of Clinical Question Answering.
Proceedings of the Software Engineering, 2008

2007
Research Paper: Knowledge-based Methods to Help Clinicians Find Answers in MEDLINE.
J. Am. Medical Informatics Assoc., 2007

Application of Information Technology: Essie: A Concept-based Search Engine for Structured Biomedical Text.
J. Am. Medical Informatics Assoc., 2007

Research Paper: Using Wireless Handheld Computers to Seek Information at the Point of Care: An Evaluation by Clinicians.
J. Am. Medical Informatics Assoc., 2007

Answering Clinical Questions with Knowledge-Based and Statistical Techniques.
Comput. Linguistics, 2007

Frontiers of biomedical text mining: current progress.
Briefings Bioinform., 2007

Combining Resources to Find Answers to Biomedical Questions.
Proceedings of The Sixteenth Text REtrieval Conference, 2007

Session Introduction.
Proceedings of the Biocomputing 2007, 2007

Extracting Semantic Predications from Medline Citations for Pharmacogenomics.
Proceedings of the Biocomputing 2007, 2007

Automatically Finding Images for Clinical Decision Support.
Proceedings of the Workshops Proceedings of the 7th IEEE International Conference on Data Mining (ICDM 2007), 2007

Interpreting comparative constructions in biomedical text.
Proceedings of the Biological, translational, and clinical language processing, 2007

From indexing the biomedical literature to coding clinical text: experience with MTI and machine learning approaches.
Proceedings of the Biological, translational, and clinical language processing, 2007

Semantic Clustering of Answers to Clinical Questions.
Proceedings of the AMIA 2007, 2007

2006
Word sense disambiguation by selecting the best semantic type based on Journal Descriptor Indexing: Preliminary experiment.
J. Assoc. Inf. Sci. Technol., 2006

Research Paper: Automatically Identifying Health Outcome Information in MEDLINE Records.
J. Am. Medical Informatics Assoc., 2006

Methods for automatically evaluating answers to complex questions.
Inf. Retr., 2006

Finding Relevant Passages in Scientific Articles: Fusion of Automatic Approaches vs. an Interactive Team Effort.
Proceedings of the Fifteenth Text REtrieval Conference, 2006

Exploring the limits of single-iteration clarification dialogs.
Proceedings of the SIGIR 2006: Proceedings of the 29th Annual International ACM SIGIR Conference on Research and Development in Information Retrieval, 2006

The role of knowledge in conceptual retrieval: a study in the domain of clinical medicine.
Proceedings of the SIGIR 2006: Proceedings of the 29th Annual International ACM SIGIR Conference on Research and Development in Information Retrieval, 2006

Will Pyramids Built of Nuggets Topple Over?.
Proceedings of the Human Language Technology Conference of the North American Chapter of the Association of Computational Linguistics, 2006

Generative Content Models for Structural Analysis of Medical Abstracts.
Proceedings of the Workshop on Linking Natural Language and Biology, 2006

Semantic Processing to Enhance Retrieval of Diagnosis Citations from Medline.
Proceedings of the AMIA 2006, 2006

Evaluation of PICO as a Knowledge Representation for Clinical Questions.
Proceedings of the AMIA 2006, 2006

Preliminary Comparison of Three Search Engines for Point of Care Access to MEDLINE<sup>®</sup> Citations.
Proceedings of the AMIA 2006, 2006

MEDLINE as a Source of Just-in-Time Answers to Clinical Questions.
Proceedings of the AMIA 2006, 2006

Answer Extraction, Semantic Clustering, and Extractive Summarization for Clinical Question Answering.
Proceedings of the ACL 2006, 2006

2005
A Menagerie of Tracks at Maryland: HARD, Enterprise, QA, and Genomics, Oh My!
Proceedings of the Fourteenth Text REtrieval Conference, 2005

Fusion of Knowledge-Intensive and Statistical Approaches for Retrieving and Annotating Textual Genomics Documents.
Proceedings of the Fourteenth Text REtrieval Conference, 2005

Automatically Evaluating Answers to Definition Questions.
Proceedings of the HLT/EMNLP 2005, 2005

Semantic characteristics of MEDLINE citations useful for therapeutic decision-making.
Proceedings of the AMIA 2005, 2005

"Bag of Words" is not enough for Strength of Evidence Classification.
Proceedings of the AMIA 2005, 2005

The Role of Title, Metadata and Abstract in Identifying Clinically Relevant Journal Articles.
Proceedings of the AMIA 2005, 2005

Evaluating Summaries and Answers: Two Sides of the Same Coin?
Proceedings of the Workshop on Intrinsic and Extrinsic Evaluation Measures for Machine Translation and/or Summarization@ACL 2005, 2005

2004
Improving Passage Retrieval Using Interactive Elicition and Statistical Modeling.
Proceedings of the Thirteenth Text REtrieval Conference, 2004

Knowledge-Intensive and Statistical Approaches to the Retrieval and Annotation of Genomics MEDLINE Citations.
Proceedings of the Thirteenth Text REtrieval Conference, 2004

PubMed on Tap: Discovering Design Principles for Online Information Delivery to Handheld Computers.
Proceedings of the MEDINFO 2004, 2004

Organizing Literature Information for Clinical Decision Support.
Proceedings of the MEDINFO 2004, 2004

A Usability Study of the PubMed on Tap User Interface for PDAs.
Proceedings of the MEDINFO 2004, 2004

A Testbed System for Mobile Point-of-Care Information Delivery.
Proceedings of the 17th IEEE Symposium on Computer-Based Medical Systems (CBMS 2004), 2004

2003
Making MIRACLEs: Interactive translingual search for Cebuano and Hindi.
ACM Trans. Asian Lang. Inf. Process., 2003

Methods for Accurate Retrieval of MEDLINE Citations in Functional Genomics.
Proceedings of The Twelfth Text REtrieval Conference, 2003

HARD Experiment at Maryland: From Need Negotiation to Automated HARD Process.
Proceedings of The Twelfth Text REtrieval Conference, 2003

The Effect of Bilingual Term List Size on Dictionary-Based Cross-Language Information Retrieval.
Proceedings of the 36th Hawaii International Conference on System Sciences (HICSS-36 2003), 2003

Correcting OCR text by association with historical datasets.
Proceedings of the Document Recognition and Retrieval X, 2003

2002
Cross-Language Access to Recorded Speech in the MALACH Project.
Proceedings of the Text, Speech and Dialogue, 5th International Conference, 2002


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