Dietrich Rebholz-Schuhmann
Orcid: 0000-0002-1018-0370Affiliations:
- German National Library of Medicine (ZB MED), Germany
- University of Cologne, Faculty of Medicine, Germany
- Insight Centre for Data Analytics, Galway, Ireland
According to our database1,
Dietrich Rebholz-Schuhmann
authored at least 147 papers
between 1998 and 2024.
Collaborative distances:
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Online presence:
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on zbmath.org
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on orkg.org
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on orcid.org
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on d-nb.info
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Bibliography
2024
Enabling personalised disease diagnosis by combining a patient's time-specific gene expression profile with a biomedical knowledge base.
BMC Bioinform., December, 2024
Proceedings of the 57th Hawaii International Conference on System Sciences, 2024
2023
Briefings Bioinform., September, 2023
CoRR, 2023
OntoClue, a framework to compare vector-based approaches for document relatedness using the RELISH corpus.
Proceedings of the 14th International Conference on Semantic Web Applications and Tools for Health Care and Life Sciences (SWAT4HCLS 2023), 2023
Comparative analysis of protein function text-based embeddings and their applicability to prediction tasks.
Proceedings of the 14th International Conference on Semantic Web Applications and Tools for Health Care and Life Sciences (SWAT4HCLS 2023), 2023
Proceedings of the 14th International Conference on Semantic Web Applications and Tools for Health Care and Life Sciences (SWAT4HCLS 2023), 2023
Proceedings of the 14th International Conference on Semantic Web Applications and Tools for Health Care and Life Sciences (SWAT4HCLS 2023), 2023
A Comparison of Vector-based Approaches for Document Similarity Using the RELISH Corpus.
Proceedings of the 6th Workshop on Semantic Web Solutions for Large-Scale Biomedical Data Analytics co-located with ESWC 2023, 2023
Proceedings of the 3rd Workshop on Metadata and Research (objects) Management for Linked Open Science, 2023
Proceedings of the 3rd Workshop on Metadata and Research (objects) Management for Linked Open Science, 2023
Proceedings of the 1st Conference on Research Data Infrastructure - Connecting Communities, 2023
Proceedings of the 1st Conference on Research Data Infrastructure - Connecting Communities, 2023
Proceedings of the 1st Conference on Research Data Infrastructure - Connecting Communities, 2023
2022
Convolutional Embedded Networks for Population Scale Clustering and Bio-Ancestry Inferencing.
IEEE ACM Trans. Comput. Biol. Bioinform., 2022
Ontology-based identification and prioritization of candidate drugs for epilepsy from literature.
J. Biomed. Semant., 2022
Adversary-Aware Multimodal Neural Networks for Cancer Susceptibility Prediction From Multiomics Data.
IEEE Access, 2022
2021
Briefings Bioinform., 2021
DeepKneeExplainer: Explainable Knee Osteoarthritis Diagnosis From Radiographs and Magnetic Resonance Imaging.
IEEE Access, 2021
Proceedings of the Joint Proceedings of the 2nd International Workshop on Deep Learning meets Ontologies and Natural Language Processing (DeepOntoNLP 2021) & 6th International Workshop on Explainable Sentiment Mining and Emotion Detection (X-SENTIMENT 2021) co-located with co-located with 18th Extended Semantic Web Conference 2021, Hersonissos, Greece, June 6th, 2021
2020
CoRR, 2020
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2020
2019
Predicting knee osteoarthritis severity: comparative modeling based on patient's data and plain X-ray images.
CoRR, 2019
Predicting links between tumor samples and genes using 2-Layered graph based diffusion approach.
BMC Bioinform., 2019
Selected Approaches Ranking Contextual Term for the BioASQ Multi-label Classification (Task6a and 7a).
Proceedings of the Machine Learning and Knowledge Discovery in Databases, 2019
Proceedings of the 9th International Conference on Digital Public Health, 2019
Ranked MSD: A New Feature Ranking and Feature Selection Approach for Biomarker Identification.
Proceedings of the Machine Learning and Knowledge Extraction, 2019
2018
CoRR, 2018
Disease mentions in airport and hospital geolocations expose dominance of news events for disease concerns.
J. Biomed. Semant., 2018
Improving data workflow systems with cloud services and use of open data for bioinformatics research.
Briefings Bioinform., 2018
Extending LargeRDFBench for Multi-Source Data at Scale for SPARQL Endpoint Federation.
Proceedings of the Emerging Topics in Semantic Technologies, 2018
Proceedings of the 17th IEEE International Conference on Machine Learning and Applications, 2018
Proceedings of the Semantic Web: ESWC 2018 Satellite Events, 2018
Using Machine Learning to Distinguish Infected from Non-infected Subjects at an Early Stage Based on Viral Inoculation.
Proceedings of the Data Integration in the Life Sciences - 13th International Conference, 2018
Linked Data Based Multi-omics Integration and Visualization for Cancer Decision Networks.
Proceedings of the Data Integration in the Life Sciences - 13th International Conference, 2018
Proceedings of the Big Data Analytics and Knowledge Discovery, 2018
Proceedings of the IEEE/ACM 2018 International Conference on Advances in Social Networks Analysis and Mining, 2018
2017
J. Biomed. Semant., 2017
Towards precision medicine: discovering novel gynecological cancer biomarkers and pathways using linked data.
J. Biomed. Semant., 2017
J. Biomed. Semant., 2017
A Deep Learning Approach to Genomics Data for Population Scale Clustering and Ethnicity Prediction.
Proceedings of the Workshop on Semantic Web Solutions for Large-scale Biomedical Data Analytics co-located with 14th Extended Semantic Web Conference, 2017
Proceedings of the Workshop on Semantic Web Solutions for Large-scale Biomedical Data Analytics co-located with 14th Extended Semantic Web Conference, 2017
Proceedings of the Semantic Web: ESWC 2017 Satellite Events - ESWC 2017 Satellite Events, Portorož, Slovenia, May 28, 2017
Quantifying the Content of Biomedical Semantic Resources as a Core for Drug Discovery Platforms.
Proceedings of the Workshop on Semantic Web Solutions for Large-scale Biomedical Data Analytics co-located with 14th Extended Semantic Web Conference, 2017
Proceedings of the 2017 IEEE International Conference on Big Data (IEEE BigData 2017), 2017
2016
Proceedings of the Data Management and Analytics for Medicine and Healthcare, 2016
Proceedings of the Second International Workshop on Visualization and Interaction for Ontologies and Linked Data co-located with the 15th International Semantic Web Conference, 2016
2015
Extending the evaluation of Genia Event task toward knowledge base construction and comparison to Gene Regulation Ontology task.
BMC Bioinform., December, 2015
A multilingual gold-standard corpus for biomedical concept recognition: the Mantra GSC.
J. Am. Medical Informatics Assoc., 2015
Database J. Biol. Databases Curation, 2015
The semantic web in translational medicine: current applications and future directions.
Briefings Bioinform., 2015
Linked Functional Annotation For Differentially Expressed Gene (DEG) Demonstrated using Illumina Body Map 2.0.
Proceedings of the 8th Semantic Web Applications and Tools for Life Sciences International Conference, 2015
2014
J. Biomed. Semant., 2014
Biological network extraction from scientific literature: state of the art and challenges.
Briefings Bioinform., 2014
Collaboratively Annotating Multilingual Parallel Corpora in the Biomedical Domain―some MANTRAs.
Proceedings of the Ninth International Conference on Language Resources and Evaluation, 2014
2013
Evaluating gold standard corpora against gene/protein tagging solutions and lexical resources.
J. Biomed. Semant., 2013
J. Biomed. Semant., 2013
Database J. Biol. Databases Curation, 2013
Proceedings of the 10th International Workshop on OWL: Experiences and Directions (OWLED 2013) co-located with 10th Extended Semantic Web Conference (ESWC 2013), 2013
Proceedings of the 3rd Workshop on Semantic Publishing, 2013
A Discourse-Driven Content Model for Summarising Scientific Articles Evaluated in a Complex Question Answering Task.
Proceedings of the 2013 Conference on Empirical Methods in Natural Language Processing, 2013
Multilingual Semantic Resources and Parallel Corpora in the Biomedical Domain: the CLEF-ER Challenge.
Proceedings of the Working Notes for CLEF 2013 Conference , 2013
Entity Recognition in Parallel Multi-lingual Biomedical Corpora: The CLEF-ER Laboratory Overview.
Proceedings of the Information Access Evaluation. Multilinguality, Multimodality, and Visualization, 2013
Proceedings of the Working Notes for CLEF 2013 Conference , 2013
An Evaluation of the Concept Retrieval Annotation for Spanish-English CLEFER Parallel Corpora.
Proceedings of the Working Notes for CLEF 2013 Conference , 2013
Proceedings of the Information Access Evaluation. Multilinguality, Multimodality, and Visualization, 2013
Proceedings of the Working Notes for CLEF 2013 Conference , 2013
Proceedings of the Working Notes for CLEF 2013 Conference , 2013
Proceedings of the BioNLP Shared Task 2013 Workshop, Sofia, 2013
2012
Poseidon: An information retrieval and extraction system for metagenomic marine science.
Ecol. Informatics, 2012
Quantitative comparison of mapping methods between Human and Mammalian Phenotype Ontology.
J. Biomed. Semant., 2012
Automatic recognition of conceptualization zones in scientific articles and two life science applications.
Bioinform., 2012
Bioinform., 2012
Linking PharmGKB to Phenotype Studies and Animal Models of Disease for Drug Repurposing.
Proceedings of the Biocomputing 2012: Proceedings of the Pacific Symposium, 2012
Proceedings of the Eighth International Conference on Language Resources and Evaluation, 2012
Proceedings of the Eighth International Conference on Language Resources and Evaluation, 2012
Proceedings of the COLING 2012, 2012
Finding small molecule and protein pairs in scientific literature using a bootstrapping method.
Proceedings of the 2012 Workshop on Biomedical Natural Language Processing, 2012
2011
BMC Bioinform., 2011
J. Biomed. Semant., 2011
Assessment of NER solutions against the first and second CALBC Silver Standard Corpus.
J. Biomed. Semant., 2011
Improving the extraction of complex regulatory events from scientific text by using ontology-based inference.
J. Biomed. Semant., 2011
Ontology design patterns to disambiguate relations between genes and gene products in GENIA.
J. Biomed. Semant., 2011
Bioinform., 2011
Proceedings of the 2nd International Conference on Biomedical Ontology, 2011
Exploring the Generation and Integration of Publishable Scientific Facts Using the Concept of Nano-publications.
Proceedings of the 1st Workshop on Semantic Publishing 2011, 2011
Exploitation of Cross-References between Terminological Resources within the CALBC Context.
Proceedings of the 2011 Database and Expert Systems Applications, 2011
2010
Measuring prediction capacity of individual verbs for the identification of protein interactions.
J. Biomed. Informatics, 2010
Wrestling with Biomedical Research Results: Language Resources and Literature Analysis.
J. Bioinform. Comput. Biol., 2010
Functional variation of alternative splice forms in their protein interaction networks: a literature mining approach.
BMC Bioinform., 2010
Proceedings of the Workshop on Semantic Web Applications and Tools for Life Sciences, 2010
Proceedings of the Workshop on Semantic Web Applications and Tools for Life Sciences, 2010
Proceedings of the Fourth International Symposium for Semantic Mining in Biomedicine, 2010
Proceedings of the 7th International Workshop on OWL: Experiences and Directions (OWLED 2010), 2010
The CALBC Silver Standard Corpus for Biomedical Named Entities - A Study in Harmonizing the Contributions from Four Independent Named Entity Taggers.
Proceedings of the International Conference on Language Resources and Evaluation, 2010
Proceedings of the Ontology Theory, Management and Design - Advanced Tools and Models., 2010
2009
Annotation of protein residues based on a literature analysis: cross-validation against UniProtKb.
BMC Bioinform., 2009
Reuse of terminological resources for efficient ontological engineering in Life Sciences.
BMC Bioinform., 2009
BMC Bioinform., 2009
Response to comment on 'MeSH-up: effective MeSH text classification for improved document retrieval'.
Bioinform., 2009
Bioinform., 2009
Proceedings of the Distributed Computing, 2009
Proceedings of the 3rd International Universal Communication Symposium, 2009
How Feasible and Robust is the Automatic Extraction of Gene Regulation Events? A Cross-Method Evaluation under Lab and Real-Life Conditions.
Proceedings of the BioNLP Workshop, BioNLP@HLT-NAACL 2009, 2009
Proceedings of the Information Retrieval in Biomedicine, 2009
2008
Combining Evidence, Specificity, and Proximity towards the Normalization of Gene Ontology Terms in Text.
EURASIP J. Bioinform. Syst. Biol., 2008
Facilitating the development of controlled vocabularies for metabolomics technologies with text mining.
BMC Bioinform., 2008
BMC Bioinform., 2008
Integrating protein-protein interactions and text mining for protein function prediction.
BMC Bioinform., 2008
MedEvi: Retrieving textual evidence of relations between biomedical concepts from Medline.
Bioinform., 2008
Categorization of services for seeking information in biomedical literature: a typology for improvement of practice.
Briefings Bioinform., 2008
Proceedings of the Workshop on Semantic Web Applications and Tools for Life Sciences ( SWAT4LS ) Edinburgh, 2008
Proceedings of the On the Move to Meaningful Internet Systems: OTM 2008 Workshops, 2008
Proceedings of the eHealth Beyond the Horizon, 2008
08131 Executive Summary -- Ontologies and Text Mining for Life Sciences : Current Status and Future Perspectives.
Proceedings of the Ontologies and Text Mining for Life Sciences: Current Status and Future Perspectives, 24.03., 2008
2007
IEEE Trans. Inf. Technol. Biomed., 2007
Int. J. Medical Informatics, 2007
SYMBIOmatics: Synergies in Medical Informatics and Bioinformatics - exploring current scientific literature for emerging topics.
BMC Bioinform., 2007
2006
Int. J. Medical Informatics, 2006
Proceedings of the Second International Symposium on Semantic Mining in Biomedicine, 2006
Annotation and Disambiguation of Semantic Types in Biomedical Text: A Cascaded Approach to Named Entity Recognition.
Proceedings of the 5th Workshop on NLP and XML: Multi-Dimensional Markup in Natural Language Processing, 2006
2005
Proceedings of the Connecting Medical Informatics and Bio-Informatics - Proceedings of MIE 2005, 2005
2004
Proceedings of the International Joint Workshop on Natural Language Processing in Biomedicine and its Applications, 2004
1999
Interact. Comput., 1999
1998
Automatic segmentation of the bronchial tract from spiral CT data for virtual reality representation.
Proceedings of the Medical Imaging 1998: Image Processing, 1998
Course tracking and contour extraction of retinal vessels from color fundus photographs: most efficient use of steerable filters for model-based image analysis.
Proceedings of the Medical Imaging 1998: Image Processing, 1998
Einsatz von steuerbaren Filtern zur modellbasierten Segmentation von Fundusphotographien.
Proceedings of the Bildverarbeitung für die Medizin: Algorithmen, 1998