Deeptak Verma

According to our database, Deeptak Verma authored at least 9 papers between 2008 and 2021.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2021

Building blocks and blueprints for bacterial autolysins.

Spencer J. Mitchell, Deeptak Verma, Karl E. Griswold, Chris Bailey-Kellogg

PLoS Comput. Biol., 2021

2020

Deep Dive into Machine Learning Models for Protein Engineering.

Yuting Xu, Deeptak Verma, Robert P. Sheridan, Andy Liaw, Junshui Ma, Nicholas M. Marshall, John McIntosh, Edward C. Sherer, Vladimir Svetnik, Jennifer M. Johnston

J. Chem. Inf. Model., 2020

2019

Pareto Optimization of Combinatorial Mutagenesis Libraries.

Deeptak Verma, Gevorg Grigoryan, Chris Bailey-Kellogg

IEEE ACM Trans. Comput. Biol. Bioinform., 2019

2016

OCoM-SOCoM: Combinatorial Mutagenesis Library Design Optimally Combining Sequence and Structure Information.

Deeptak Verma, Gevorg Grigoryan, Chris Bailey-Kellogg

Proceedings of the 7th ACM International Conference on Bioinformatics, 2016

2013

Variations within Class-A β-Lactamase Physiochemical Properties Reflect Evolutionary and Environmental Patterns, but not Antibiotic Specificity.

Deeptak Verma, Donald J. Jacobs, Dennis R. Livesay

PLoS Comput. Biol., 2013

A visual analytics approach to exploring protein flexibility subspaces.

Scott Barlowe, Jing Yang, Donald J. Jacobs, Dennis R. Livesay, Jamal Alsakran, Ye Zhao, Deeptak Verma, James Mottonen

Proceedings of the IEEE Pacific Visualization Symposium, 2013

2012

Changes in Lysozyme Flexibility upon Mutation Are Frequent, Large and Long-Ranged.

Deeptak Verma, Donald J. Jacobs, Dennis R. Livesay

PLoS Comput. Biol., 2012

2011

WaveMap: Interactively Discovering Features From Protein Flexibility Matrices Using Wavelet-based Visual Analytics.

Scott Barlowe, Yujie Liu, Jing Yang, Dennis R. Livesay, Donald J. Jacobs, James Mottonen, Deeptak Verma

Comput. Graph. Forum, 2011

2008

Docking-MM-GB/SA and ADME Screening of HIV-1 NNRTI Inhibitor: Nevirapine and its Analogues.

Dipankar Sengupta, Deeptak Verma, Pradeep Kumar Naik

Silico Biol., 2008