Davide Risso

Orcid: 0000-0001-8508-5012

According to our database1, Davide Risso authored at least 14 papers between 2009 and 2024.

Collaborative distances:
  • Dijkstra number2 of five.
  • Erdős number3 of four.

Timeline

Legend:

Book 
In proceedings 
Article 
PhD thesis 
Dataset
Other 

Links

Online presence:

On csauthors.net:

Bibliography

2024
Improving replicability in single-cell RNA-Seq cell type discovery with Dune.
BMC Bioinform., December, 2024

2023
benchdamic: benchmarking of differential abundance methods for microbiome data.
Bioinform., January, 2023

Curated single cell multimodal landmark datasets for R/Bioconductor.
PLoS Comput. Biol., 2023

2022
SpatialExperiment: infrastructure for spatially-resolved transcriptomics data in R using Bioconductor.
Bioinform., 2022

2021
mbkmeans: Fast clustering for single cell data using mini-batch k-means.
PLoS Comput. Biol., 2021

Per-sample standardization and asymmetric winsorization lead to accurate clustering of RNA-seq expression profiles.
Bioinform., 2021

PsiNorm: a scalable normalization for single-cell RNA-seq data.
Bioinform., 2021

2018
clusterExperiment and RSEC: A Bioconductor package and framework for clustering of single-cell and other large gene expression datasets.
PLoS Comput. Biol., 2018

2011
GC-Content Normalization for RNA-Seq Data.
BMC Bioinform., 2011

Statistical Test of Expression Pattern (STEPath): a new strategy to integrate gene expression data with genomic information in individual and meta-analysis studies.
BMC Bioinform., 2011

A novel approach to the clustering of microarray data via nonparametric density estimation.
BMC Bioinform., 2011

2009
A comparison on effects of normalisations in the detection of differentially expressed genes.
BMC Bioinform., 2009

A-MADMAN: Annotation-based microarray data meta-analysis tool.
BMC Bioinform., 2009

A modified LOESS normalization applied to microRNA arrays: a comparative evaluation.
Bioinform., 2009


  Loading...