David Weese

According to our database1, David Weese authored at least 19 papers between 2000 and 2017.

Collaborative distances:
  • Dijkstra number2 of five.
  • Erdős number3 of four.

Timeline

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Legend:

Book 
In proceedings 
Article 
PhD thesis 
Dataset
Other 

Links

On csauthors.net:

Bibliography

2017
DNA-Seq Error Correction Based on Substring Indices.
Proceedings of the Algorithms for Next-Generation Sequencing Data, Techniques, 2017

Full-Text Indexes for High-Throughput Sequencing.
Proceedings of the Algorithms for Next-Generation Sequencing Data, Techniques, 2017

2015
CIDANE: Comprehensive Isoform Discovery and Abundance Estimation.
Proceedings of the Research in Computational Molecular Biology, 2015

2014
Fiona: a parallel and automatic strategy for read error correction.
Bioinform., 2014

Journaled string tree - a scalable data structure for analyzing thousands of similar genomes on your laptop.
Bioinform., 2014

2013
Indices and Applications in High-Throughput Sequencing.
PhD thesis, 2013

Scalable string similarity search/join with approximate seeds and multiple backtracking.
Proceedings of the Joint 2013 EDBT/ICDT Conferences, 2013

2012
Fast and sensitive read mapping with approximate seeds and multiple backtracking
CoRR, 2012

RazerS 3: Faster, fully sensitive read mapping.
Bioinform., 2012

Detecting genomic indel variants with exact breakpoints in single- and paired-end sequencing data using SplazerS.
Bioinform., 2012

2011
STELLAR: fast and exact local alignments.
BMC Bioinform., 2011

A Novel And Well-Defined Benchmarking Method For Second Generation Read Mapping.
BMC Bioinform., 2011

2010
MicroRazerS: rapid alignment of small RNA reads.
Bioinform., 2010

2009
A consistency-based consensus algorithm for <i>de novo</i> and reference-guided sequence assembly of short reads.
Bioinform., 2009

2008
SeqAn An efficient, generic C++ library for sequence analysis.
BMC Bioinform., 2008

Fast and Adaptive Variable Order Markov Chain Construction.
Proceedings of the Algorithms in Bioinformatics, 8th International Workshop, 2008

Efficient String Mining under Constraints Via the Deferred Frequency Index.
Proceedings of the Advances in Data Mining. Medical Applications, 2008

Segment-based multiple sequence alignment.
Proceedings of the ECCB'08 Proceedings, 2008

2000
Model-based image processing using snakes and mutual information.
Proceedings of the Medical Imaging 2000: Image Processing, 2000


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