David Murrugarra

According to our database, David Murrugarra authored at least 13 papers between 2010 and 2022.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2022

An information theoretic approach for the inference of Boolean networks and functions from data: BoCSE.

David Murrugarra, Alan Veliz-Cuba

Patterns, 2022

Stability of Linear Boolean Networks.

Karthik Chandrasekhar, Claus Kadelka, Reinhard C. Laubenbacher, David Murrugarra

CoRR, 2022

Revealing the canalizing structure of Boolean functions: Algorithms and applications.

Elena S. Dimitrova, Brandilyn Stigler, Claus Kadelka, David Murrugarra

Autom., 2022

2021

Mathematical modeling of the Candida albicans yeast to hyphal transition reveals novel control strategies.

David J. Wooten, Jorge Gómez Tejeda Zañudo, David Murrugarra, Austin M. Perry, Anna Dongari-Bagtzoglou, Reinhard C. Laubenbacher, Clarissa J. Nobile, Réka Albert

PLoS Comput. Biol., 2021

Quantifying the total effect of edge interventions in discrete multistate networks.

David Murrugarra, Elena S. Dimitrova

Autom., 2021

2016

Identification of control targets in Boolean molecular network models via computational algebra.

David Murrugarra, Alan Veliz-Cuba, Boris Aguilar, Reinhard C. Laubenbacher

BMC Syst. Biol., 2016

2015

Molecular network control through boolean canalization.

David Murrugarra, Elena S. Dimitrova

EURASIP J. Bioinform. Syst. Biol., 2015

2014

Algebraic Models and Their Use in Systems Biology.

Reinhard C. Laubenbacher, Franziska Hinkelmann, David Murrugarra, Alan Veliz-Cuba

Proceedings of the Discrete and Topological Models in Molecular Biology, 2014

Structure and dynamics of acyclic networks.

Alan Veliz-Cuba, David Murrugarra, Reinhard C. Laubenbacher

Discret. Event Dyn. Syst., 2014

2013

Boolean nested canalizing functions: A comprehensive analysis.

Yuan Li, John O. Adeyeye, David Murrugarra, Boris Aguilar, Reinhard C. Laubenbacher

Theor. Comput. Sci., 2013

2012

Modeling stochasticity and variability in gene regulatory networks.

David Murrugarra, Alan Veliz-Cuba, Boris Aguilar, Seda Arat, Reinhard C. Laubenbacher

EURASIP J. Bioinform. Syst. Biol., 2012

2011

Bifurcations in Boolean Networks.

Chris J. Kuhlman, Henning S. Mortveit, David Murrugarra, V. S. Anil Kumar

Proceedings of the 17th International Workshop on Cellular Automata and Discrete Complex Systems, 2011

2010

A Mathematical Framework for Agent Based Models of Complex Biological Networks

Franziska Hinkelmann, David Murrugarra, Abdul Salam Jarrah, Reinhard C. Laubenbacher

CoRR, 2010