David Kleinfeld

According to our database, David Kleinfeld authored at least 16 papers between 2004 and 2024.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of three.

2024

CellBoost: A pipeline for machine assisted annotation in neuroanatomy.

Kui Qian, Beth Friedman, Jun Takatoh, Alexander Groisman, Fan Wang, David Kleinfeld, Yoav Freund

AI Open, 2024

Towards Explainable Automated Neuroanatomy.

Kui Qian, Litao Qiao, Beth Friedman, Edward O'Donnell, David Kleinfeld, Yoav Freund

Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2024, 2024

2021

Voxelized simulation of cerebral oxygen perfusion elucidates hypoxia in aged mouse cortex.

Grant Hartung, Shoale Badr, Mohammad Moeini, Frédéric Lesage, David Kleinfeld, Ali Alaraj, Andreas A. Linninger

PLoS Comput. Biol., 2021

Contribution of animal models toward understanding resting state functional connectivity.

Patricia Pais-Roldán, Celine Mateo, Wen-Ju Pan, Benjamin T. Acland, David Kleinfeld, Lawrence H. Snyder, Xin Yu, Shella D. Keilholz

NeuroImage, 2021

2018

Comparing two classes of biological distribution systems using network analysis.

Lia Papadopoulos, Pablo Blinder, Henrik Ronellenfitsch, Florian Klimm, Eleni Katifori, David Kleinfeld, Danielle S. Bassett

PLoS Comput. Biol., 2018

Simulations of blood as a suspension predicts a depth dependent hematocrit in the circulation throughout the cerebral cortex.

Grant Hartung, Claudia Vesel, Ryan Morley, Ali Alaraj, John G. Sled, David Kleinfeld, Andreas A. Linninger

PLoS Comput. Biol., 2018

Robust Landmark Detection for Alignment of Mouse Brain Section Images.

Yuncong Chen, David Kleinfeld, Martyn Goulding, Yoav Freund

CoRR, 2018

2017

Depth-dependent flow and pressure characteristics in cortical microvascular networks.

Franca Schmid, Philbert S. Tsai, David Kleinfeld, Patrick Jenny, Bruno Weber

PLoS Comput. Biol., 2017

The impact of vessel size, orientation and intravascular contribution on the neurovascular fingerprint of BOLD bSSFP fMRI.

Mario Gilberto Báez-Yánez, Philipp Ehses, Christian C. Mirkes, Philbert S. Tsai, David Kleinfeld, Klaus Scheffler

NeuroImage, 2017

The Active Atlas: Combining 3D Anatomical Models with Texture Detectors.

Yuncong Chen, David Kleinfeld, Yoav Freund

CoRR, 2017

The Active Atlas: Combining 3D Anatomical Models with Texture Detectors.

Yuncong Chen, Lauren McElvain, Alex Tolpygo, Daniel Ferrante, Harvey J. Karten, Partha P. Mitra, David Kleinfeld, Yoav Freund

Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2017, 2017

2012

Vectorization of optically sectioned brain microvasculature: Learning aids completion of vascular graphs by connecting gaps and deleting open-ended segments.

John P. Kaufhold, Philbert Tsai, Pablo Blinder, David Kleinfeld

Medical Image Anal., 2012

2010

Rapid determination of particle velocity from space-time images using the Radon transform.

Patrick J. Drew, Pablo Blinder, Gert Cauwenberghs, Andy Y. Shih, David Kleinfeld

J. Comput. Neurosci., 2010

2009

A Proposal for a Coordinated Effort for the Determination of Brainwide Neuroanatomical Connectivity in Model Organisms at a Mesoscopic Scale.

Jason W. Bohland, Caizhi Wu, Helen Barbas, Hemant Bokil, Mihail Bota, Hans C. Breiter, Hollis T. Cline, John C. Doyle, Peter J. Freed, Ralph J. Greenspan, Suzanne N. Haber, Michael Hawrylycz, Daniel G. Herrera, Claus C. Hilgetag, Z. Josh Huang, Allan Jones, Edward G. Jones, Harvey J. Karten, David Kleinfeld, Rolf Kötter, Henry A. Lester, John M. Lin, Brett D. Mensh, Shawn Mikula, Jaak Panksepp, Joseph L. Price, Joseph Safdieh, Clifford B. Saper, Nicholas D. Schiff, Jeremy D. Schmahmann, Bruce W. Stillman, Karel Svoboda, Larry W. Swanson, Arthur W. Toga, David C. Van Essen, James D. Watson, Partha P. Mitra

PLoS Comput. Biol., 2009

2008

Computational Intelligence in Electrophysiology: Trends and Open Problems.

Cengiz Günay, Tomasz G. Smolinski, William W. Lytton, Thomas M. Morse, Padraig Gleeson, Sharon M. Crook, Volker Steuber, Angus Silver, Horatiu Voicu, Peter Andrews, Hemant Bokil, Hiren Maniar, Catherine Loader, Samar Mehta, David Kleinfeld, David J. Thomson, Partha P. Mitra, Gloster Aaron, Jean-Marc Fellous

Proceedings of the Applications of Computational Intelligence in Biology: Current Trends and Open Problems, 2008

2004

Quantitative Analysis of Volumetric TPLSM Data.

Agustin Ifarraguerri, Beverly Thompson, Philbert Tsai, Beth Friedman, Chris Schaffer, Varda Lev-Ram, Roger Tsien, David Kleinfeld, Jeff Squier

Proceedings of the 2004 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2004