David J. Sherman

J. Bioinform. Comput. Biol., 2015

Mimoza: web-based semantic zooming and navigation in metabolic networks.

[BibT_eX]

[DOI]

BMC Syst. Biol., 2015

2014

Knowledge-based Generalization of Metabolic Models.

[BibT_eX]

[DOI]

J. Comput. Biol., 2014

Knowledge-based generalization of metabolic networks: A practical study.

[BibT_eX]

[DOI]

J. Bioinform. Comput. Biol., 2014

Modeling acclimatization by hybrid systems: Condition changes alter biological system behavior models.

[BibT_eX]

[DOI]

Biosyst., 2014

2013

Implementing biological hybrid systems: Allowing composition and avoiding stiffness.

[BibT_eX]

[DOI]

Rodrigo Assar

Appl. Math. Comput., 2013

2012

A genome-scale metabolic model of the lipid-accumulating yeast Yarrowia lipolytica.

[BibT_eX]

[DOI]

BMC Syst. Biol., 2012

Reusing and composing models of cell fate regulation of human bone precursor cells.

[BibT_eX]

[DOI]

Biosyst., 2012

2010

Reconciling Competing Models: A Case Study of Wine Fermentation Kinetics.

[BibT_eX]

[DOI]

Rodrigo Assar

Felipe A. Vargas

Proceedings of the Algebraic and Numeric Biology - 4th International Conference, 2010

2009

Génolevures: protein families and synteny among complete hemiascomycetous yeast proteomes and genomes.

[BibT_eX]

[DOI]

Nucleic Acids Res., 2009

Mining the Semantics of Genome Super-Blocks to Infer Ancestral Architectures.

[BibT_eX]

[DOI]

Géraldine Jean

J. Comput. Biol., 2009

Swarming along the evolutionary branches sheds light on genome rearrangement scenarios.

[BibT_eX]

[DOI]

Proceedings of the Genetic and Evolutionary Computation Conference, 2009

2008

Fusion and Fission of Genes Define a Metric between Fungal Genomes.

[BibT_eX]

[DOI]

Pascal Durrens

PLoS Comput. Biol., 2008

An efficient probabilistic population-based descent for the median genome problem.

[BibT_eX]

[DOI]

Adrien Goëffon

Proceedings of the Genetic and Evolutionary Computation Conference, 2008

2007

How to decide which are the most pertinent overly-represented features during gene set enrichment analysis.

[BibT_eX]

[DOI]

Roland Barriot

Isabelle Dutour

BMC Bioinform., 2007

Family relationships: should consensus reign? - consensus clustering for protein families.

[BibT_eX]

[DOI]

Bioinform., 2007

2006

Génolevures complete genomes provide data and tools for comparative genomics of hemiascomycetous yeasts.

[BibT_eX]

[DOI]

Nucleic Acids Res., 2006

2005

ProViz: protein interaction visualization and exploration.

[BibT_eX]

[DOI]

Bioinform., 2005

2004

Génolevures: comparative genomics and molecular evolution of hemiascomycetous yeasts.

[BibT_eX]

[DOI]

Nucleic Acids Res., 2004

IntAct: an open source molecular interaction database.

[BibT_eX]

[DOI]

Henning Hermjakob

Luisa Montecchi-Palazzi

Nucleic Acids Res., 2004

1998

Factotum: Automatic and Systematic Sharing Support for Systems Analyzers.

[BibT_eX]

[DOI]

Nicolas Magnier

Proceedings of the Tools and Algorithms for Construction and Analysis of Systems, 1998

Almana: A BDD Minimization Tool Integrating Heuristic and Rewriting Methods.

[BibT_eX]

[DOI]

Macha Nikolskaïa

Antoine Rauzy

Proceedings of the Formal Methods in Computer-Aided Design, 1998

1996

Squeezing Intermediate Construction in Equational Programs.

[BibT_eX]

[DOI]

Alain Miniussi

Proceedings of the Partial Evaluation, International Seminar, 1996

1994

Improving Arithmetic Performance using Fine-Grain Unfolding.

[BibT_eX]

[DOI]

Proceedings of the Programming Language Implementation and Logic Programming, 1994

1992

Call Unfolding Strategies for Equational Logic Programs.

[BibT_eX]

Robert Strandh

Proceedings of the PEPM'92, 1992

1991

Partial Evaluation of an Intermediate Language for Equational Programs.

[BibT_eX]

Irène Durand

Robert Strandh

Proceedings of the Actes JTASPEFL'91 (Bordeaux, 1991

Optimization of Equational Programs Using Partial Evaluation.

[BibT_eX]

[DOI]