David J. John

According to our database, David J. John authored at least 26 papers between 1994 and 2020.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2020

Using evolutionary algorithms and pareto ranking to identify secure virtual local area networks.

Alina Pacheco Rodríguez, Errin W. Fulp, David J. John, Jinku Cui

Proceedings of the GECCO '20: Genetic and Evolutionary Computation Conference, 2020

Time Series Adjustment Enhancement of Hierarchical Modeling of Arabidopsis Thaliana Gene Interactions.

Edward E. Allen, John Farrell, Alexandria F. Harkey, David J. John, Gloria K. Muday, James L. Norris, Bo Wu

Proceedings of the Algorithms for Computational Biology, 2020

2018

A BCHC genetic algorithm model of cotemporal hierarchical Arabidopsis thaliana gene interactions.

Bree Ann LaPointe, David J. John, James L. Norris, Edward E. Allen, Alexandria F. Harkey, Joelle K. Muhlemann, Gloria K. Muday

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2018

2015

An Evolutionary Strategy for Resilient Cyber Defense.

Errin W. Fulp, H. Donald Gage, David J. John, Matthew R. McNiece, William H. Turkett Jr., Xin Zhou

Proceedings of the 2015 IEEE Global Communications Conference, 2015

2014

Hierarchical Probabilistic Interaction Modeling for Multiple Gene Expression Replicates.

Kristopher L. Patton, David J. John, James L. Norris, Daniel R. Lewis, Gloria K. Muday

IEEE ACM Trans. Comput. Biol. Bioinform., 2014

Parallel and Distributed Computing across the Computer Science Curriculum.

David J. John, Stan J. Thomas

Proceedings of the 2014 IEEE International Parallel & Distributed Processing Symposium Workshops, 2014

Evolutionary based moving target cyber defense.

David J. John, Robert W. Smith, William H. Turkett Jr., Daniel A. Cañas, Errin W. Fulp

Proceedings of the Genetic and Evolutionary Computation Conference, 2014

An initial framework for evolving computer configurations as a moving target defense.

Brian Lucas, Errin W. Fulp, David J. John, Daniel A. Cañas

Proceedings of the Cyber and Information Security Research Conference, 2014

2012

Bayesian probabilistic network modeling from multiple independent replicates.

Kristopher L. Patton, David J. John, James L. Norris

BMC Bioinform., 2012

2011

Continuous Cotemporal Probabilistic Modeling of Systems Biology Networks from Sparse Data.

David J. John, Jacquelyn S. Fetrow, James L. Norris

IEEE ACM Trans. Comput. Biol. Bioinform., 2011

Probabilistic Signal Network Models from Multiple Replicates of Sparse Time-Course Data.

Kristopher L. Patton, David J. John, James L. Norris

Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2011

2010

Comparison of Co-temporal Modeling Algorithms on Sparse Experimental Time Series Data Sets.

Edward E. Allen, James L. Norris, David J. John, Stan J. Thomas, William H. Turkett Jr., Jacquelyn S. Fetrow

Proceedings of the 10th IEEE International Conference on Bioinformatics and Bioengineering, 2010

Examining effects of variability on systems biology modeling algorithms.

Rachel A. Black, David J. John, Jacquelyn S. Fetrow, James L. Norris

Proceedings of the First ACM International Conference on Bioinformatics and Computational Biology, 2010

2007

Metropolis-Hastings Algorithm and Continuous Regression for finding Next-State Models of Protein Modification using Information Scores.

David J. John, Jacquelyn S. Fetrow, James L. Norris

Proceedings of the 7th IEEE International Conference on Bioinformatics and Bioengineering, 2007

Additional limitations of the clustering validation method figure of merit.

Amy L. Olex, David J. John, Elizabeth M. Hiltbold, Jacquelyn S. Fetrow

Proceedings of the 45th Annual Southeast Regional Conference, 2007

The shuffle index and evaluation of models of signal transduction pathways.

Edward E. Allen, Liyang Diao, Jacquelyn S. Fetrow, David J. John, Richard F. Loeser, Leslie B. Poole

Proceedings of the 45th Annual Southeast Regional Conference, 2007

2006

Bioinformatics and computing curriculum: a new model for interdisciplinary courses.

Jacquelyn S. Fetrow, David J. John

Proceedings of the 37th SIGCSE Technical Symposium on Computer Science Education, 2006

Reconstructing networks using co-temporal functions.

Edward E. Allen, Anthony Pecorella, Jacquelyn S. Fetrow, David J. John, William H. Turkett Jr.

Proceedings of the 44st Annual Southeast Regional Conference, 2006

2005

Constructing an even grammar from a 2-element sample.

Margaret Ann Francel, David J. John

Proceedings of the 43nd Annual Southeast Regional Conference, 2005

Heuristics for dependency conjectures in proteomic signaling pathways.

Edward E. Allen, Jacquelyn S. Fetrow, David J. John, Stan J. Thomas

Proceedings of the 43nd Annual Southeast Regional Conference, 2005

2004

An algorithm for constructing an even grammar from a language sample.

Margaret Ann Francel, David J. John

Proceedings of the 42nd Annual Southeast Regional Conference, 2004

2003

3-Regular Hypergraphs that are Decomposable and Threshold.

Margaret Ann Francel, David J. John

Ars Comb., 2003

2002

Co-evolution With The Bierwirth-Mattfeld Hybrid Scheduler.

David J. John

Proceedings of the GECCO 2002: Proceedings of the Genetic and Evolutionary Computation Conference, 2002

1998

Counting Balanced Ternary Designs.

Margaret Ann Francel, David J. John

Ars Comb., 1998

Pursuing bounds of <i>ir(Q_n)</i>.

David J. John

Proceedings of the 36th Annual ACM Southeast Regional Conference, 1998

1994

NSF supported projects: parallel computation as an integrated component in the undergraduate curriculum in computer science.

David J. John

Proceedings of the 25th SIGCSE Technical Symposium on Computer Science Education, 1994