Daniel Garijo

Orcid: 0000-0003-0454-7145

According to our database1, Daniel Garijo authored at least 105 papers between 2011 and 2024.

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Bibliography

2024
Workflows Community Summit 2024: Future Trends and Challenges in Scientific Workflows.
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CoRR, 2024

Applying the FAIR Principles to Computational Workflows.
CoRR, 2024

Farm Explorer: A Tool for Calculating Transparent Greenhouse Gas Emissions.
Proceedings of the ISWC 2024 Posters, 2024

RepoFromPaper: An Approach to Extract Software Code Implementations from Scientific Publications.
Proceedings of the Natural Scientific Language Processing and Research Knowledge Graphs, 2024

Automated Extraction of Research Software Installation Instructions from README Files: An Initial Analysis.
Proceedings of the Natural Scientific Language Processing and Research Knowledge Graphs, 2024

Assessing the Overlap of Science Knowledge Graphs: A Quantitative Analysis.
Proceedings of the Natural Scientific Language Processing and Research Knowledge Graphs, 2024

Bidirectional Paper-Repository Tracing in Software Engineering.
Proceedings of the 21st IEEE/ACM International Conference on Mining Software Repositories, 2024

2023
Bidirectional dataset.
Dataset, December, 2023

Bidirectional Paper-Repository Traceability.
Dataset, December, 2023

A framework for the broad dissemination of hydrological models for non-expert users.
Environ. Model. Softw., 2023

Recording provenance of workflow runs with RO-Crate.
CoRR, 2023

SALTBot: Linking Software and Articles in Wikidata.
Proceedings of the Wikidata Workshop 2023 co-located with 22nd International Semantic Web Conference (ISWC 2023), 2023

TEC: Transparent Emissions Calculation Toolkit.
Proceedings of the Semantic Web - ISWC 2023, 2023

Softalias-KG: Reconciling Software Mentions in Scientific Literature.
Proceedings of the ISWC 2023 Posters, 2023

Towards Assessing FAIR Research Software Best Practices in an Organization Using RDF-star.
Proceedings of the Posters and Demo Track of the 19th International Conference on Semantic Systems co-located with 19th International Conference on Semantic Systems (SEMANTiCS 2023), 2023

Declarative RDF Construction from In-Memory Data Structures with RML.
Proceedings of the 4th International Workshop on Knowledge Graph Construction co-located with 20th Extended Semantic Web Conference ESWC 2023, 2023

Ya2ro: A tool for creating Research Objects from minimum metadata.
Proceedings of the 3rd Workshop on Metadata and Research (objects) Management for Linked Open Science, 2023

FAIR Research Object Assessment: A landscape analysis.
Proceedings of the 3rd Workshop on Metadata and Research (objects) Management for Linked Open Science, 2023

2022
CPV Classifier.
Dataset, May, 2022

CPV Classifier.
Dataset, May, 2022

A study of the quality of Wikidata.
J. Web Semant., 2022

Nine best practices for research software registries and repositories.
PeerJ Comput. Sci., 2022

Multi-label Text Classification for Public Procurement in Spanish.
Proces. del Leng. Natural, 2022

DockerPedia: A Knowledge Graph of Software Images and Their Metadata.
Int. J. Softw. Eng. Knowl. Eng., 2022

Packaging research artefacts with RO-Crate.
Data Sci., 2022

EAAI-22 Blue Sky Ideas in Artificial Intelligence Education from the AAAI/ACM SIGAI New and Future AI Educator Program.
AI Matters, 2022


Inspect4py: A Knowledge Extraction Framework for Python Code Repositories.
Proceedings of the 19th IEEE/ACM International Conference on Mining Software Repositories, 2022

FAIROs: Towards FAIR Assessment in Research Objects.
Proceedings of the Linking Theory and Practice of Digital Libraries, 2022

Extending Ontology Engineering Practices to Facilitate Application Development.
Proceedings of the Knowledge Engineering and Knowledge Management, 2022

Towards Capturing Scientific Reasoning to Automate Data Analysis.
Proceedings of the 44th Annual Meeting of the Cognitive Science Society, 2022

2021
Crosswalks among metadata schemas for data cube descriptions in RELIANCE.
Dataset, May, 2021

Scopus records.
Dataset, January, 2021

Crossing the chasm between ontology engineering and application development: A survey.
J. Web Semant., 2021

Artificial Intelligence for Modeling Complex Systems: Taming the Complexity of Expert Models to Improve Decision Making.
ACM Trans. Interact. Intell. Syst., 2021

A framework for creating knowledge graphs of scientific software metadata.
Quant. Sci. Stud., 2021

Workflows Community Summit: Advancing the State-of-the-art of Scientific Workflows Management Systems Research and Development.
CoRR, 2021


FOOPS!: An Ontology Pitfall Scanner for the FAIR principles.
Proceedings of the ISWC 2021 Posters, 2021

Creating and Querying Personalized Versions of Wikidata on a Laptop.
Proceedings of the 2nd Wikidata Workshop (Wikidata 2021) co-located with the 20th International Semantic Web Conference (ISWC 2021), 2021

2020
Best Practices for Implementing FAIR Vocabularies and Ontologies on the Web.
Proceedings of the Applications and Practices in Ontology Design, 2020

Editorial: Special issue on Semantic eScience: Methods, tools and applications.
Semantic Web, 2020

FAIR Computational Workflows.
Data Intell., 2020

Nine Best Practices for Research Software Registries and Repositories: A Concise Guide.
CoRR, 2020

Semantic Workflows and Machine Learning for the Assessment of Carbon Storage by Urban Trees.
CoRR, 2020

Best Practices for Implementing FAIR Vocabularies and Ontologies on the Web.
CoRR, 2020

KGTK: A Toolkit for Large Knowledge Graph Manipulation and Analysis.
Proceedings of the Semantic Web - ISWC 2020, 2020

A Template-Based Approach for Annotating Long-Tail Datasets.
Proceedings of the Joint Proceedings of Workshops AI4LEGAL2020, 2020

OBA: An Ontology-Based Framework for Creating REST APIs for Knowledge Graphs.
Proceedings of the Semantic Web - ISWC 2020, 2020

Mapping the Web Ontology Language to the OpenAPI Specification.
Proceedings of the Advances in Conceptual Modeling, 2020

Coming to Terms with FAIR Ontologies.
Proceedings of the Knowledge Engineering and Knowledge Management, 2020

2019
The Linked Earth Ontology: A Modular, Extensible Representation of Open Paleoclimate Data.
Dataset, February, 2019

Automating ontology engineering support activities with OnToology.
J. Web Semant., 2019

Towards Automated Hypothesis Testing in Neuroscience.
Proceedings of the Heterogeneous Data Management, Polystores, and Analytics for Healthcare, 2019

T2WML: A Cell-Based Language to Map Tables into Wikidata Records.
Proceedings of the ISWC 2019 Satellite Tracks (Posters & Demonstrations, 2019

Semantic workflows for benchmark challenges: Enhancing comparability, reusability and reproducibility.
Proceedings of the Biocomputing 2019: Proceedings of the Pacific Symposium, 2019

T2WML: Table To Wikidata Mapping Language.
Proceedings of the 10th International Conference on Knowledge Capture, 2019

Linking Abstract Plans of Scientific Experiments to their Corresponding Execution Traces (short paper).
Proceedings of the Third International Workshop on Capturing Scientific Knowledge co-located with the 10th International Conference on Knowledge Capture (K-CAP 2019), 2019

WDPlus: Leveraging Wikidata to Link and Extend Tabular Data (short paper).
Proceedings of the Third International Workshop on Capturing Scientific Knowledge co-located with the 10th International Conference on Knowledge Capture (K-CAP 2019), 2019

Semantic Workflows and Machine Learning for the Assessment of Carbon Storage by Urban Trees.
Proceedings of the Third International Workshop on Capturing Scientific Knowledge co-located with the 10th International Conference on Knowledge Capture (K-CAP 2019), 2019

Towards human-guided machine learning.
Proceedings of the 24th International Conference on Intelligent User Interfaces, 2019

An intelligent interface for integrating climate, hydrology, agriculture, and socioeconomic models.
Proceedings of the 24th International Conference on Intelligent User Interfaces: Companion, 2019

Semantic Modelling of Plans and Execution Traces for Enhancing Transparency of IoT Systems.
Proceedings of the Sixth International Conference on Internet of Things: Systems, 2019

OKG-Soft: An Open Knowledge Graph with Machine Readable Scientific Software Metadata.
Proceedings of the 15th International Conference on eScience, 2019

SoMEF: A Framework for Capturing Scientific Software Metadata from its Documentation.
Proceedings of the 2019 IEEE International Conference on Big Data (IEEE BigData), 2019

2018
PSM-Flow: Probabilistic Subgraph Mining for Discovering Reusable Fragments in Workflows.
Proceedings of the 2018 IEEE/WIC/ACM International Conference on Web Intelligence, 2018

Semantic Software Metadata for Workflow Exploration and Evolution.
Proceedings of the 14th IEEE International Conference on e-Science, 2018

2017
An ontology for videogame interoperability.
Multim. Tools Appl., 2017

Abstract, link, publish, exploit: An end to end framework for workflow sharing.
Future Gener. Comput. Syst., 2017

Engineering Academic Software (Dagstuhl Perspectives Workshop 16252).
Dagstuhl Manifestos, 2017

AI buzzwords explained: scientific workflows.
AI Matters, 2017

Automatic Generation of Portions of Scientific Papers for Large Multi-Institutional Collaborations Based on Semantic Metadata.
Proceedings of the First Workshop on Enabling Open Semantic Science co-located with 16th International Semantic Web Conference (ISWC 2017), 2017

A Controlled Crowdsourcing Approach for Practical Ontology Extensions and Metadata Annotations.
Proceedings of the Semantic Web - ISWC 2017, 2017

WIDOCO: A Wizard for Documenting Ontologies.
Proceedings of the Semantic Web - ISWC 2017, 2017

Improving Publication and Reproducibility of Computational Experiments through Workflow Abstractions.
Proceedings of Workshops and Tutorials of the 9th International Conference on Knowledge Capture (K-CAP2017), 2017

The DISK Hypothesis Ontology: Capturing Hypothesis Evolution for Automated Discovery.
Proceedings of Workshops and Tutorials of the 9th International Conference on Knowledge Capture (K-CAP2017), 2017

NiW: Converting Notebooks into Workflows to Capture Dataflow and Provenance.
Proceedings of Workshops and Tutorials of the 9th International Conference on Knowledge Capture (K-CAP2017), 2017

Requirements for Facilitating the Continuous Creation of Scientific Workflow Variants.
Proceedings of Workshops and Tutorials of the 9th International Conference on Knowledge Capture (K-CAP2017), 2017

Towards Automating Data Narratives.
Proceedings of the 22nd International Conference on Intelligent User Interfaces, 2017

Towards Continuous Scientific Data Analysis and Hypothesis Evolution.
Proceedings of the Thirty-First AAAI Conference on Artificial Intelligence, 2017

2016
OntoSoft: A distributed semantic registry for scientific software.
Proceedings of the 12th IEEE International Conference on e-Science, 2016

2015
Mining Abstractions in Scientific Workows.
PhD thesis, 2015

Using a suite of ontologies for preserving workflow-centric research objects.
J. Web Semant., 2015

LDP4ROs: Managing Research Objects with the W3C Linked Data Platform.
Proceedings of the 24th International Conference on World Wide Web Companion, 2015

OntoSoft: Capturing Scientific Software Metadata.
Proceedings of the 8th International Conference on Knowledge Capture, 2015

OnToology, a tool for collaborative development of ontologies.
Proceedings of the International Conference on Biomedical Ontology, 2015

2014
Common motifs in scientific workflows: An empirical analysis.
Future Gener. Comput. Syst., 2014

The Research Object Suite of Ontologies: Sharing and Exchanging Research Data and Methods on the Open Web.
CoRR, 2014

Research Objects for Audio Processing: Capturing Semantics for Reproducibility.
Proceedings of the AES International Conference on Semantic Audio 2014, 2014

Towards workflow ecosystems through semantic and standard representations.
Proceedings of the 9th Workshop on Workflows in Support of Large-Scale Science, 2014

Preserving Data to Preserving Research: Curation of Process and Context.
Proceedings of the 11th International Conference on Digital Preservation, 2014

Challenges for Provenance Analytics Over Geospatial Data.
Proceedings of the Provenance and Annotation of Data and Processes, 2014

FragFlow Automated Fragment Detection in Scientific Workflows.
Proceedings of the 10th IEEE International Conference on e-Science, 2014

Workflow Reuse in Practice: A Study of Neuroimaging Pipeline Users.
Proceedings of the 10th IEEE International Conference on e-Science, 2014

2013
Transforming meteorological data into Linked Data.
Semantic Web, 2013

On specifying and sharing scientific workflow optimization results using research objects.
Proceedings of WORKS 2013: 8th Workshop On Workflows in Support of Large-Scale Science, 2013

Detecting common scientific workflow fragments using templates and execution provenance.
Proceedings of the 7th International Conference on Knowledge Capture, 2013

From Preserving Data to Preserving Research: Curation of Process and Context.
Proceedings of the Research and Advanced Technology for Digital Libraries, 2013

A workflow PROV-corpus based on taverna and wings.
Proceedings of the Joint 2013 EDBT/ICDT Conferences, 2013

2012
Augmenting PROV with Plans in P-PLAN: Scientific Processes as Linked Data.
Proceedings of the Second International Workshop on Linked Science 2012, 2012


2011
A new approach for publishing workflows: abstractions, standards, and linked data.
Proceedings of the WORKS'11, 2011

A provenance-aware Linked Data application for trip management and organization.
Proceedings of the Proceedings the 7th International Conference on Semantic Systems, 2011

Metadata Provenance: Dublin Core on the Next Level.
Proceedings of the 2011 International Conference on Dublin Core and Metadata Applications, 2011

Extending DCAM for Metadata Provenance.
Proceedings of the 2011 International Conference on Dublin Core and Metadata Applications, 2011


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