Daniel E. Zak

According to our database, Daniel E. Zak authored at least 5 papers between 2001 and 2010.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2010

Genome-wide histone acetylation data improve prediction of mammalian transcription factor binding sites.

Stephen A. Ramsey, Theo A. Knijnenburg, Kathleen A. Kennedy, Daniel E. Zak, Mark Gilchrist, Elizabeth S. Gold, Carrie D. Johnson, Aaron E. Lampano, Vladimir Litvak, Garnet Navarro, Tetyana Stolyar, Alan Aderem, Ilya Shmulevich

Bioinform., 2010

2008

Uncovering a Macrophage Transcriptional Program by Integrating Evidence from Motif Scanning and Expression Dynamics.

Stephen A. Ramsey, Sandy L. Klemm, Daniel E. Zak, Kathleen A. Kennedy, Vesteinn Thorsson, Bin Li, Mark Gilchrist, Elizabeth S. Gold, Carrie D. Johnson, Vladimir Litvak, Garnet Navarro, Jared C. Roach, Carrie M. Rosenberger, Alistair G. Rust, Natalya Yudkovsky, Alan Aderem, Ilya Shmulevich

PLoS Comput. Biol., 2008

2005

Unconventional systems analysis problems in molecular biology: a case study in gene regulatory network modeling.

Daniel E. Zak, Rajanikanth Vadigepalli, Gregory E. Gonye, Francis J. Doyle III, James S. Schwaber, Babatunde A. Ogunnaike

Comput. Chem. Eng., 2005

Sensitivity analysis of oscillatory (bio)chemical systems.

Daniel E. Zak, Jörg Stelling, Francis J. Doyle III

Comput. Chem. Eng., 2005

2001

Stochastic kinetic analysis of transcriptional feedback models for circadian rhythms.

Daniel E. Zak, Francis J. Doyle III, Dionisios G. Vlachos, James S. Schwaber

Proceedings of the 40th IEEE Conference on Decision and Control, 2001